Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                            ------>NtERF2                                                                                          <------NtERF2                                                                                         <---------ATERF1(2)                                                                                         --------->DEAR3(1)                                                                                         --------->ATERF1(2)                                                                                         --------->RAP2.6(2)                                                                                         --------->RRTF1(3)                                                                      <---------ICU4     --------->RRTF1(2)                                                                     --------->ICU4      --------->RAP2.3(3)                                                                ----------->GT1          --------->RAP2.3(2)                                                                <------MYB83             --------->DREB2C(2)                                                               --------->MYB59           --------->ANAC58                                                              <--------P                 --------->ANAC58                                                             <---------ZAT14            --------->RAP2.3(1)                                                             --------->ZAT14            --------->ERF1                                                            --------->ALFIN1            <---------RAP2.6(2)                                      --------->At4g35610 <---------ANAC46  <---------DAG2<---------RAP2.6(3)                             --------->CCA1(2)          <---------ZAT14     <----------DOF2<------NtERF2               <----------DOF2 ---------->DOF2          --------->ZAT14  <-----------GT1--------->ATERF1(1)      --------->MYB52(1)  <---------TOE2(3)      --------->LBD16<------MYB46(1)        <---------ATERF1(1)   acaaaaaaaaacgatttctttgtccaataagataaaagggagcaaaaaacccagagattgcagtgtaggtaaaaattactttttccaagggccgccaatg  4002200                                    <-----------RAV1(1)                         --------->LBD16                        --------->ANAC46                  --------->At4g35610                                              <---------AtLEC2                  ==============================RAV                      --------->At5g28300                  ----------->RAV1(2)                                   ----------->GT1    --------->ANAC46                  <---------At4g35610                --------->ZAT14  <---------ANAC46     --------->ANAC58        ------>ZmHOX2a(1)<------NtERF2          --------->ZAT18      <---------LBD16       --------->ANAC58        ----------->GT1<---------LBD16       --------->AtLEC2--------->MYB46(3)  <-----------GT1   cattctcgtcctgaaaaatcatctgcccgcgaagaattgtgttggccatgctcactacattcaaccaattttgggggtaaattttacatgaacaagcagc  4002300                                                     --------->ICU4                --------->ARR14(2)                                                   ---------->DOF2                 <---------ARR14(2)                                              <---------ATHB12                 --------->At4g35610              --------->ANAC58              --------->WOX13(1)                 <---------At4g35610              --------->ANAC58           --------->ANAC58                  <----------CDC5 --------->ATHB12                        --------->ANAC58                 <---------At4g35610      <-   gaatgagtgggaaatgaagcaatctcgatatcaacaaaatcaaacccaatcactaaagattagactcacaagatgccgatgagcggatagagaaactcca  4002400                               <---------ARR14(2)                               --------->ARR14(2)                           --------->TOE2(3)                           ------->GAMYB                           --------->YAB1                          --------->MYB46(3)                         -------->P                         ------>MYB46(1)                         ------>MYB83                       <---------MYB46(2)                       --------->DEAR3(1)                       --------->AtMYB61                       <---------MYB111(2)                       <---------MYB55(2)                       <---------MYB111(1)                       --------->MYB46(3)                                                         <--                      <---------MYB52(2)                                                          ---                      --------->MYB46(3)                                                        <----                    --------->ANAC46                                                            -----                    <---------ALFIN1                                                            -----     --------->At4g35610--------->MYB55(1)                                                <------ZmHOX2a(1)   --------->MYB46(3)------>NtERF2 --------->LBD16                                      --------->ANAC58 --------ATHB12    --------->MYB46(3) ---------->DOF2                   <---------YAB1  --------->ANAC58   aatcaacagctaaacaatttccccaccaaccaaaatccccaaaagagttggcagaaattaagaagaagagagtgatgatagagaaacagcaaggactctg  4002500                                  <----------DOF2    --------->ANAC46           ----------------->AGL1    --------->ANAC58       <---------ZAT2    --------->ANAC58       --------->At4g35610  --------->MYB52(1)       --------->ZAT2 <---------REM1(2)         <---------At4g35610 -------------AGL15       <-----------RAV1(1)                                               <-------- ------------>AGL15    --------->ARR14(2)                                          <---------MYB52(1) -----ZAT14            --------->GLK1(2)                   --------->MYB52(1)    <---------ANAC46 ---->ZAT14            ------->TEIL   <---------TOE2(3)  <---------MYB52(2)--------->At4g35610 ---->At4g35610        <---------ARR14(2)       <---------GLK1(2)          <---------At4g35610   ctctaaacggaagacgaagagaacgaatctgctgcgatttagggtatgcagaatttcaaacgaacagagagagagagagcggtccgtttatttgtaacat  4002600                                                    --------->ANAC58                                                    --------->ANAC58                 <----------DOF2                <---------DAG2                  --------->ANAC58           <----------DOF2                <----------DOF2                 --------->ANAC58          <---------ANAC58   <-------         <-----------GT1                       --------->RAP2.3(1)        <---------ANAC58   --------   <---------GLK1(2)               *TSS <---------WRKY38(1) <---------AHL20(2) <---------AtLEC2     < ---GT1<----------DOF2        <---------At4g35610 <------NtERF2      --------->MYB52(1)  <---------At5g28300   tttcaaattctttactccctttttttttttgcagcatcgtgatcaacgaggcgcaaggatgttttaatggctaatggctttgcataacttttacagtgtt  4002700                <----------DOF2       --------->MYB111(1)       --------->MYB52(2)       >>>>>>>>>>AtMYB44       --------->MYB46(2)     <---------MYB52(1)                                                               <---------ICU4    ------------>MYB.PH3(2)                                                           --------->MYB52(1)   <---------TOE2(3)                                                      <---------ANAC58 --ZAT6--------->MYB59                  <----------DOF2     ----------->GT1        --------->YAB1 --->GT1  <-----------GT1    ------>ZmHOX2a(1)            ---------->DOF2 <---------ANAC58 ---------AHL20(2)<---------AHL20(2) ------->TEIL<---------AHL20(2)  --------->At4g35610     --------   aatttaagttagttacttcttttattttctcctattttgcatctttccaatttttatgcagaaagtaaaacatctgtcttgagactcataacgacatctc  4002800                                    <---------AHL20(1)                                    --------->AHL20(2)         --------->AHL20(2)         --------->AHL20(1)         <---------AHL20(2)         <---------AHL20(2)     <---------AHL20(2)             --------->ARR11(3)    <---------AHL20(2)              <---------ARR11(3)    --------->AHL20(2)     --------->ARR11(3) --------->AHL20(2)        <---------ARR11(3) <---------AHL20(1)       <---------GLK1(1)                 ---------->DOF2                 --------- --------->AHL20(1)       --------->GLK1(1)           --------->ANAC58                 <---------YAB1 ->At4g35610      --------->AtMYB61--------->AHL20(2) --------->ANAC58               --------->MYB52(1)   aaatattttaattttttggaccaaaacgatatctcaaatatattggtcactgtctcaagcgaaaaagaaaacacaaattaagacccataacgattcagaa  4002900                                                   <---------MYB46(3)                                                  <---------AtMYB61                                               <-----------RAV1(1)                                            <---------ARR14(2)                                            --------->ARR11(3)                                           <---------CCA1(2)                                        --------->AHL20(1)     ----------->HVH21              --------->ARR11(3)     --------->AHL20(2)       <---------WOX13(1)                   <-              <---------ARR11(3)   --------->AHL20(2)  <------NtERF2                              ---         <------NtERF2          --------->AHL20(2)--------->ALFIN1                               <--- >YAB1<------ZmHOX2a(1)     <-------TEIL<---------AHL20(1) ----------->HVH21       <----------DOF2<--   tgaagagaggaggcaagatttcatggtatatacataaaataatatatatctggtggtggcactgactgactggttcaagtgtgttctttaaacattgaga  4003000         <---------ANAC58         <---------ANAC58        <---------ZAT2                   <---------GLK1(2)        --------->ZAT2                  --------->ZAT2  --------->At4g35610                   --------->At4g35610  <---------At4g35610           <-----------RAV1(1)  --------->ZAT2       --------->ZAT2   <---------ZAT2             --------->At4g35610 -----ZmHOX2a(2)       --------->At4g35610         <---------YAB1  <---------At4g35610 ------>ARR11(3)       <---------ZAT2   <---------At4g35610      <-----------RAV1(2) ------GLK1(1)         <---------At4g35610   <---------ZAT18    <---------MYB52(1) -------ARR11(3)   --------->ANAC46    ------>NtERF2        ------>ZmHOX2a(1)    <---------ALFIN1 <--   gatcagctcaagcttggccacaaggagctgagttttgttgccagcttcgcactcttatagtcctccctcagttgaataaacctgcacattattctcaact  4003100  Previous    Next  AGI:  At5g12360.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G14190.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO16841.1) Range:  from: 4000700    to: 4002635    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g12370.1    Description:  SEC10 (EXOCYST COMPLEX COMPONENT SEC10). Identical to Exocyst complex component 5 (SEC10) [Arabidopsis Thaliana] (GB:Q8RVQ5;GB:Q56W60;GB:Q94CK5); similar to hypothetical protein OsJ_034291 [Oryza sativa (japonica cultivar-group)] (GB:EAZ20082.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39645.1); similar to hypothetical protein OsI_036660 [Oryza sativa (indica cultivar-group)] (GB:EAY82701.1); contains InterPro domain Exocyst complex component Sec10; (InterPro:IPR009976) Range:  from: 4002776    to: 4008805    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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