Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                --------->MYB52(1)           --------->At4g35610               <---------ICU4           <---------At4g35610    --------->ANAC58      ------------------------>ANAC81       --------->ICU4    <------ZmHOX2a(1)             --------->ANAC58                                     --------->At4g35610  <---------TOE2(3)             ---------->DOF2                           ---------->DOF2 --->ID1  ------->TEIL --------->AHL20(2)   <---------ATHB12       ----------->GT1   --------->YAB1   tatttaggaatgaagctaacaaaaaaaaaatcagacaagcgaagtaatcactagaaacgaagattagactcgataaaaaagcttcaagcagaagagaaat  3955800                                                                                                  ---                                 --------->ANAC58                                                <---                                 --------->ANAC58                              <------ZmHOX2a(1)-----                                 --------->ANAC46          --------->ARR11(3) <------MYB83      -----                          --------->ANAC58                 <---------ARR11(3) <------MYB46(1)  ------        <------ZmHOX2a(1) --------->ANAC46                <---------GLK1(2) <--------P   ----------->GT1      <---------TOE2(3)   --------->ANAC58   ---------->DOF2        <-------TEIL       --------->GLK1(2)   tcgaaattgaggaatttggaattcgaaaacgaaacaagacagagcccaatagcaaaaccaaaatctcagattcaattggtaggagaaagaatcgaaacaa  3955900                              ------>ZmHOX2a(2)                             <------ZmHOX2a(2)                             --------->GLK1(1)                            --------->AGP1                         <-----------HVH21                            <---------AGP1            ---------->DOF2                            <---------ARR11(3)        ======================bZIP_DOF                            <---------ARR14(2)     <---------TOE2(3)   <---------ANAC46        ------->MYC3        --------->ARR14(3)    --------->MYB52(1)--------->ALFIN1        <-------MYC3        <---------ARR14(3)    <---------DOF5.7(2) --------->ALFIN1       --------->ANAC46     <-----------ARR10   <---------MYB52(2)<---------TGA1a    <-------TEIL           <---------CCA1(2)   --------->STY1(2)  <---------O2 ------>YAB1         --------->ANAC58          <---------STY1(2)  --------->TGA1a ------ATHB12        --------->ANAC58   ====================================bZIP_DOF               <- ---->ANAC58<---------ANAC58--------->ARR11(3) --------->At4g35610--------->O2                 <----- ---->ANAC58<---------ANAC58--------->ARR14(2) <---------At4g35610<---------ANAC55(2)          <----- --->WOX13(1)   <---------ETT(2)        ---------->DOF2     --------->At4g35610 --------->ALFIN1   <-   tcaacatacacgtttctttcgacaagcccagatctcgtttgagaaagctagctaacgaaagcagcgaaacgtgaggggggaagtgtttgggtcttgggct  3956000                                                                      --------->HSFB2a(2)             --------->LBD16                             <------ZmHOX2a(2)             ------>NtERF2                             --------->GLK1(1)          --------->DAG2       --------->ARR14(2)                        ===============HOX2a_HOX2a  <----------ID1       <---------GLK1(1)                         <------ZmHOX2a(1)    <---------HSFB2a(2)  >>>>>>>>>>GATA-1                           ---------->DOF2     <---------HSFB2a(1) --------ANAC58                           <---------HSFB2a(2)    <---------HSFC1(2) ----ANAC58 --------->ANAC46              --------->HSFB2a(2)    --------->HSFB2a(1) ----ANAC58<---------LBD16               ------>ZmHOX2a(2)       --------->HSFC1(2)              <--- --------ANAC58         <---------YAB1   ===============HOX2a_HOX2a <-------TEIL ---------->DOF2 <---   tgggtatcgaattcccgcctaaaattttgattttagcaagtgatcgagaaaggacagagatcgaagaaggttcgagagagcgaaaaagcgagactagtta  3956100                                                                <---------ANAC58                                                                <---------ANAC58                                                            <---------MYB52(1)<---------AHL20(2)                                     <------ZmHOX2a(1)     <-------GAMYB     --------->AHL20(2)          <----------DOF2    <---------ATHB12    <------------------------ANAC81      *TSS <---------At5g28300 ------TOE1(3)      <---------At4g35610  -------->ATHB1   <---------ANAC58   <---------AHL20(1) ------TOE2(3)      --------->At4g35610 --------->ICU4    <---------ANAC58   --------->AHL20(1)     <   gggtttgagagtcttttgtgtctgatgaccaatgagagaggaattattctctgttttcttccgttggcttctctctcaatataatcaacaaattacagtc  3956200                                    <---------REM1(2)                                   <-----------HVH21                              --------->ALFIN1                             ------->MYC3                                                <---------MYB52(1)                             <-------MYC3                                          ------>ZmHOX2a(2)                            <---------O2                     --------->ANAC46     <---------HSFB2a(1)                            --------->O2                   <---------ALFIN1       --------->HSFB2a(1)                            <---------ANAC46              <---------ZAT18         <------ZmHOX2a(2)                           --------->LBD16              --------->PCF2           <-----------ARR10            <---------YAB1 ------>NtERF2              --------->ANAC46           <---------ARR14(3)          --------->YAB1  <---------ANAC46            --------->ANAC58           --------->ARR14(2)          <---------ICU4 ---------->CDC5              --------->ANAC58           --------->ARR11(3)         <---------YAB1  <------NtERF2 --------->ANAC46--------->DEAR3(1)        <---------ARR14(2)      <---------AHL20(2) <---------LBD16            <---------ALFIN1             <---------ARR11(3)      <---------YAB1    <---------ATERF1(1)        <---------REM1(2)          <---------TOE2(3) <----------DOF2       <---------DEAR3(1)        --------->REM1(1)         <---------ATHB12 --------- ---------DAG2         --------->ARR14(2)      ------>ZmHOX2a(1)<-----------GT1  --------->ARR14(3)   agcctttttttattattattcaagggctccgcgtgggcttcacgcgctccttcaacacggcccacttaaccagacaaatcaaggatcttccattagctaa  3956300                                                                           <---------CCA1(2)                                                                         --------->AHL20(2)                                                                         <---------AHL20(2)                                                                 --------->ANAC46                                      <---------SPL7        <---------ARR14(2)        <<<<<<<<<RAP2.2                                     <---------MYB46(3)     --------->ARR11(3)       <---------TOE2(3)  --------->ARR14(2)       <----------DOF2                  --------->ARR14(2)       <---------YAB1  <---------ARR14(2)------->TEIL    --------->ALFIN1       --------->CCA1(1)<---------ARR14(2) >At4g35610      --------->ICU4    <---------MYB52(1)      --------->RVE1(1)--------->ARR14(2)    <--   accgtattcgaaccgagtaatgaatctctctttaaccggtggtactcttatccaaacaaaaatatccacgactatttatatccgatttagattgttatct  3956400                     <---------ANAC58                     <---------ANAC58                     <---------ANAC46                 <---------ANAC58                 <---------ANAC58               <-----------GT1                                                       <---------AHL20(2)           <---------AHL20(2)                                                      --------->YAB1          <---------AHL20(2)              <---------YAB1        ----------->GT1 --------->TOE2(3)      <---------AHL20(2)               <---------YAB1   --------->YAB1    --------->YAB1 --------DOF2  <---------AHL20(2)    ----------->GT1   <---------YAB1    <---------YAB1<---------TOE2(3)   ctttctatattttttatttacttgagtgaaaaacatgaattgttattctaaaaaaccattataagaccgaaaattatcaaaacataaataatgtaagttt  3956500                ----------->HVH21                <---------SPL7               --------->ETT(1)            <---------MYB46(3)            <------MYB46(1)                                                                 <--------            <------MYB83                                                                    <--------           --------->MYB55(2)                             --------->HSFB2a(2)               <--------           --------->MYB111(1)                      <---------ARR11(3)                      <--------           <---------AtMYB61                        --------->ARR11(3)                      ---------           --------->MYB111(2)                      <---------ARR14(3)                      <--------           --------->MYB59                          --------->ARR14(3)                     <-------TEIL           <---------MYB46(3)                       --------->ARR14(2)      --------->TOE1(2)          <--------P                        <---------MYB59     --------->AHL20(2)       --------->TOE2(2)         <-------GAMYB           <------ZmHOX2a(2)  <---------ARR14(2)      --------->TOE2(2)   <----   tcagtgttttgggttggtcggacaggtctaatccgatcgagacatgcctaacaatatcttctacaatttaagatgaaacatacgatgaatacatacgtgt  3956600 -ANAC58 -ANAC55(2)                     <---------WRKY18(1) -ANAC46                       ----------->HVH21   <---------ICU4 -ANAC58                      <----------DOF2      --------->YAB1 >ANAC55(2)                  <---------ANAC58     <---------ATHB51 <---------ARR14(2) -ANAC55(1)                  <---------ANAC58     --------->ICU4   --------->ARR14(2) -----CCA1(2)          ---------->DOF2        ----------->GT1  <---------LBD16                    <--   atatttgctgatataacatcagagacaaagtgcttgacgagaacaaaatggaataatggtatttttggggatttgagtttgtatacctgctctctactat  3956700  Previous    Next  AGI:  At5g12230.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G19480.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G19480.2); similar to hypothetical protein OsI_037842 [Oryza sativa (indica cultivar-group)] (GB:EAY83883.1) Range:  from: 3953149    to: 3956186    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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