Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                           --------->ANAC46                                                                                         --------->ANAC58                                                                                         --------->ANAC58                                                                                         <---------ALFIN1                                                                                     ------>ZmHOX2a(2)                                                                                    <------ZmHOX2a(2)                                                                          --------->ANAC58                             <---------AtLEC2                 ==============================HOX2a_HOX2a                            --------->ZAT18                   ------>ZmHOX2a(1)    --------->ARR11(3)                            <---------ZAT14               <---------ARR14(2)       <---------ARR11(3)                         <---------ANAC58                 <---------ARR11(3)       --------->ARR14(2)                         <---------ANAC46             --------->YAB1      --------->ANAC58                         <---------ANAC58       <----------DOF2         <-----------GT1<---------ALFIN1               --------->ARR11(3)     --------------->AtSPL3  =============================HOX2a_HOX2a ------->ANAC46<---------ARR11(3)   ----------->RAV1(1)   --------->ARR14(2)       <---------ARR14(2)   cacataaacatcagcaagttcttgatggtgtgcattgacaacagtacctcctttaatcaaaatcctcgtcgatgaaaccccacaagatcccacaccattc  3944400                                                                                          <---------YAB1                                                                                 --------->LBD16                                                                                --------->HSFC1(1)                                                                                --------->HSFB2a(2)                                                                        <---------DAG2  --------->YAB1                                                                        <----------DOF2 --------->AHL20(2)                                         <------ZmHOX2a(2)     ------->MYC3     <---------HSFC1(1)      <---------ZAT14         --------->ANAC46                 <-------MYC3     <---------HSFB2a(2)      --------->ZAT14 --------->ANAC58  --------->ARR11(3)   ------->MYC3      <---------LBD16<------      <---------ZAT18 --------->ANAC58  <---------ARR11(3)   <-------MYC3    <-----------GT1---------   tctctccctgcactacaaaactgcaagaaaacacatcagagagatcattttcgattttagacacatgtggatagctttttttccagaaaattataaatca  3944500                                                     <---------DEAR3(1)                                                  --------->ZAT18                      <---------At5g28300    <---------YAB1      <---------ZAT6            ---------- ---ATHB12           <-----------GT1   <---------ARR11(3)  <----------DOF2             <----------ID1 >WOX13(1)      ---------->DOF2  --------->ARR11(3) <---------------------WRI1   <---------ATHB12   -   agctccaaacttgttcttgaaagttactgtgttaagaactagatgttataagtggacggagctttcagtgttacttcaaacaaatcaaggagacaaagct  3944600                        <-----------GT1                       <---------YAB1                     <---------ICU4                     <--------HAHB4                    --------->ICU4                                     ----------->TGA1                    <---------YAB1                                     ----------->HVH21                  <--------HAHB4                                     <------MYB83                  --------->YAB1                              <---------bZIP60(2)                  <---------ICU4                              <---------ANAC46                 <---------YAB1                            ----------->HVH21           <---------ARR11(3)                              ----------->TGA1           --------->ARR11(3)                          --------->ARR14(2)          <---------GLK1(1)                            <---------ARR14(2) <---------ANAC55(2)          <---------CCA1(2)                            <---------GLK1(2)  <---------ANAC46   <---------ARR14(2)--------->ATHB51                <---------ZAT18 <------MYB46(1) >DOF2    --------->GLK1(1)                     <---------ZAT14     <---------AtMYB61 -------->ANAC46 --------->ICU4 <-------TEIL    --------->ZAT14<---------LBD16   cgacggaaactgatatctgatcattattacaaggttcaaagacagacctgagtagtggattctgacgcggatggtgacggaaacagaagaaatagagaga  3944700                                                                      -------->ATHB1                                                                   ------>ZmHOX2a(1)                                                             <---------At4g35610                                                             <---------ZAT2                                    <---------GLK1(2)<---------WOX13(1)                                   --------->At4g35610       --------->At4g35610                            <---------YAB1          <---------ANAC58  --------->YAB1         --------                --------->HSFB2a(2)<---------At4g35610       --------->ZAT2 <-----------GT1 <--------             ------->TEIL  <---------TOE2(3)        <---------ANAC58 <---------ATHB12 <---------DAG2     >>>>>>>>>TBF1        --------->YAB1            <---------ANAC46 <---------YAB1   <----------DOF2   cgatgaagaagaatgcatccagagccattgatgattcagcttctcgcgagtcttgcttgattcagcttcctatcattgtttccattctctttttgttatt  3944800                                                                                                 ----                                                                                               ------                                                                                               <-----                    ------->GAMYB                                                              <-----                  --------->At4g35610                                                          ------                 --------->MYB52(1)                                                           -------                 <---------DOF5.7(2)                                                      --------->ZAT2                <---------WRKY38(1)                      --------->ARR14(2)               --------->At4g35610                <---------WRKY45              ----------->GT1                             <---------ZAT2   <---------ATHB12--------->ANAC46 <---------AHL20(2)   <---------ARR14(2)               <---------At4g35610   <------ZmHOX2a(2)----------->GT1 --------->AHL20(2) --------->LBD16        <-----------GT1 <------ ->ATHB12   *TSS<---------WRKY12   --------->AHL20(2)<---------LBD16 <------------CBF    ----------->RAV1(1) -YAB1     ---------->DOF2     <---------ATHB12    <-----------GT1------------>CBF  <------------CBF   ggccgatcaattggaaagtcaacggaaaatcaaatcatttaataaaaccggttaaaccggatttgaatttcaattggtttttgccaaattgcagcagagc  3944900       <---------LBD16   <---------MYB52(1)  <---------MYB46(3)  <---------DEAR3(2)                 --------->MYB52(1) <---------DEAR3(1)              --------->DAG2 ------->HVH21                   --------->MYB59 --->At4g35610                   <---------TOE2(3) ----At4g35610                   <---------TOE1(3)                          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) ----ZAT2                   <---------TOE1(3)           <----------DOF2<---------DAG2       <-------- --->ZAT2                   <---------TOE2(3)        ---------->ID1   <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2) -->ARR14(2)         <-----------------AGL1      <----------DOF2    xxxxxxxxxxxxxxxx>smallRNA(i)<---- ---ARR14(2)         <-----------------AG     <-----------GT1      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)   tggccggttcgcggtttcaatagaacccttaaggtaaggtaagggattttactttgcccttttagttgaatcaatttttgaaaaaccctcacttattctt  3945000                                                                                                 <---                                                                                                 ----                                                                                                -----                                                                                       <---------ATHB12                                                           <---------AHL20(2)         ------>MYB46(1)                                                           --------->AHL20(2)         ------>MYB83<xx                                                       <----------DOF2              --------->MYB46(3)                                                <----------DOF2                     <---------MYB59                                                <---------DAG2                      <---------MYB111(2)    <---------ALFIN1                  <-----------GT1  ------>ZmHOX2a(1)            <---------MYB46(2) --------->ANAC46                    <-----------GT1---------->ID1       <---------TOE2(3)    <xxxxxx -YAB1                    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) <-----------GT1     <---------MYB111(1) -------GT1------>ZmHOX2a(1)     <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)   <---------AHL20(2) --------->GLK1(2)   actaccccatctccttcttaacctatttgaaatacaattttacccttctcctttatcctttttaattttctatttaagttttgctaccaaacaatctatt  3945100             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)          <--------HAHB4          --------->ATHB12          --------->YAB1         <---------ATHB12         <xxxxxxxxxxxxxxxxxxxxsmallRNA(l2)        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)        ------>MYB46(1)        ------>MYB83<---------AHL20(1)                           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)       --------->WOX13(1)   ------>ZmHOX2a(1)      ------>MYB83  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)     --------->MYB46(3)     <---------CCA1(2)    --------->TOE1(2)    -------->P<-----------GT1                   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)   --------->WOX13(1)    <-----------GT1        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) ------AHL20(2)     <---------AHL20(2)xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3) ----->AHL20(2)     --------->AHL20(2)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)           --------->REM1(1) ---->YAB1<---------ICU4<-----------GT1  ----------->GT1      <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) xxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)  --------->WOX13(1) ---------->DOF2------->GAMYB <-------TEIL xxxxxxxxxxxxxxxxxsmallRNA(l2)       --------->YAB1------>MYB46(1)  ----------->RAV1(1)   aaaatcaaccaatcatttacattttatttcctatctcattaatcagttaaacctacaaaaaaacgctggacaacagaaaccaataggtacaactatgttg  3945200                                                                                             --------                                                                                            ---------                                                                                            <--------                                                                                           ----------                                                                                           <---------ANAC46                                                                                           <---------                         <---------ANAC55(2)                                            <---------CCA1(2)                       <-----------GT1                                          --------->YAB1 <-----                       --------->AHL20(2)                                  --------->ZAT14 <---------                    <---------ICU4                                        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                   <---------AHL20(2)                               ---------->DOF2 --------->ANAC55(2)                   <---------YAB1        ---------->ID1          --------->YAB1<xxxxxxxxxxxxxxxxsmallRNA(i)        --------->ANAC46 --------->ANAC55(2) <----------DOF2  --------->YAB1<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) ------->TEIL      --------->AHL20(2)   <-----------GT1      <---------YAB1<---------ZAT14 <---------   atgaacttctacgaaaaacatataattacatatcgttttatttttctctttcattttcaagttataatcaaaaagacttcagtcatacgcgtttcttata  3945300  Previous    Next  AGI:  At5g12200.1    Description:  dihydropyrimidinase / DHPase / dihydropyrimidine amidohydrolase / hydantoinase (PYD2). similar to ATALN (ARABIDOPSIS ALLANTOINASE), allantoinase/ hydrolase [Arabidopsis thaliana] (TAIR:AT4G04955.1); similar to putative dihydropyrimidine amidohydrolase [Oryza sativa (japonica cultivar-group)] (GB:BAB44078.1); similar to unknown [Picea sitchensis] (GB:ABK24502.1); similar to hypothetical protein OsI_004052 [Oryza sativa (indica cultivar-group)] (GB:EAY76205.1); contains InterPro domain D-hydantoinase (InterPro:IPR011778); contains InterPro domain Metal-dependent hydrolase, composite; (InterPro:IPR011059); contains InterPro domain Dihydroorotase Range:  from: 3941529    to: 3944812    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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