Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                     --------->ZAT6                                 --------->MYB52(1)                             <---------ICU4                            --------->ICU4                            <---------YAB1                          --------->YAB1                               <---------AHL20(2)                         <---------YAB1                                --------->AHL20(2) <----------DOF2       <----------DOF2    <---------AHL20(2) ------>ZmHOX2a(1)          --------->YAB1 <---------DAG2 <---------DAG2   <-----------GT1            --------->TOE2(3)--------->TOE2(3) ------------------------ANAC81 --------->AHL20(2)   <----------DOF2   --------->AHL20(1) -->AtSPL8      <----------DOF2 <---------AHL20(2)<-----------GT1      <---------AHL20(1)   tccctttttgatgttctgcttttcactttgataattaactgtattttatattttactttcttcctaaatacaataaatttcttaacacattcaaaatccc  3936600                                                                       <---------ANAC58                                                               <---------ANAC58                                                               <---------ANAC58                   ---                                                               <---------ANAC55(2)          ---------                                                <---------YAB1 --------->ANAC55(2)       --------->YAB1                                            --------->KAN4(2)  <---------ANAC46       --------->YAB1                                        --------->YAB1 ----------->RAV1(2)       <-------TEIL  <-----                  <-----------GT1  <---------YAB1      <---------At4g35610      --------->CCA1(2) <--              <<<<<<<<<MYB2    <---------WOX13(1)    <---------ALFIN1  <---------ANAC58 <---------YAB1   atgaattagaaaattggttttcacatgtttcagattgatgaatgaaaattctcatacacctgattacgtagtttcttatgagatacatttataatcatat  3936700                                                                             --------->ANAC55(2)                                                                             ----------->GT1                                                                             <---------ANAC55(2)                                                                            --------->MYB59       ---       --------->CCA1(2)                                                  <---------MYB52(1)     <--- ------>AHL20(2)                                                         <-------GAMYB    <---------AHL20(2) >YAB1--------->ARR11(3)  --------->YAB1                             ------------>MYB.PH3(1)     ---- ----ICU4                 <---------ICU4                             ------------>AtMYB77 --------->AHL20(2) -------AHL20(2) --------->HSFB2a(1) <---------YAB1          --------->CCA1(2)           --------->AHL20(2)   ttatataagatttaggcaaaggttctaatcttgatttttatgagtagttgtggaatatagaagataagaagagacagttatgtaacaaaaattaaaatcc  3936800                                                                                ------>ZmHOX2a(1)                                                --------->AHL20(2)    ------->MYC3                                              <----------DOF2         <-------MYC3       ------>ZmHOX2a(1)                      --------------->AGL15  --------->ANAC58               - ------>LBD16 --------->TOE2(3)               --------->TOE2(3)      --------->ANAC58              -- ------HSFB2a(2)                           <-----------GT1           --------->ANAC55(2)           <- ----->HSFB2a(2)   ---------->ID1 <-----------RAV1(1)     <---------ICU4  <---------AtMYB61    <-----   cagaaattcctctcaacctttgtcttaaatccctaaatgttgtttttactttaaataccaaaattacagacacgttttggtcctaaactttctccctatc  3936900                                                                                 <---------TOE2(3)                                                                                --------->MYB52(1)                                                                                ------>MYB46(1)                                                                                ------>MYB83                                                                               --------->MYB55(1)                                                                              <---------MYB111(1)                                                                              <---------MYB59                                                                              --------->AtMYB61                                                                              <---------MYB46(2)                                                                             --------->ANAC55(2)                                                                             --------->ANAC55(1)                                                                             <---------ANAC55(2)                                                                             --------->ANAC46                                                                             --------->ANAC58                                                                             --------->ANAC58                              ------>MYB83                            --------->AtMYB61                              ------>MYB46(1)                         ------->GAMYB         --------->YAB1      --------->MYB52(1)                      --------->MYB46(3)       ------- ------>GAMYB               --------->TOE1(2)                       --------->ANAC58    <---------ANAC58 ------->MYB46(3)           --------->TOE2(2)                   --------->YAB1<---------MYB55(2) --------MYB52(2)       --------->ARR14(2)                    --------->AtLEC2<---------MYB52(2) ----ATHB12   ------>ZmHOX2a(1)   ----------->GT1     --------->YAB1--------->ANAC58    <---------ANAC58   aacaaaccctataatcctttgaaccgaataccaacgaagaaaaaaaaacattctattcatagccattcacaaccaaaacacctaacgttttcttgctaaa  3937000                                ------------------------>ANAC81                               --------->DAG2                         *TSS ---------->DOF2                       --------->ANAC58                       ------------------------>ANAC81                                         ------                       ----------->GT1                                                         ------                       --------->ANAC58                                                        ------                      --------->DAG2                                                           ------                     ---------->DOF2                           <-----------GT1               <-------                <------ZmHOX2a(1)        ----------->GT1--------->AHL20(2)            <----------DOF2 --->DOF2------------------------>ANAC81------------------------>ANAC81            ------>ZmHOX2a(1)   gaagaaacaaaaaccagaggaagaaaagcaaaaaaagtaagagaagaaaaacacaaaaaaaaataaaacctttctatttctcttcctcctttgagctttg  3937100                                                                                --------->ANAC58                                                                                --------->ANAC58                                                                  --------->At4g35610           <----                     <----------DOF2                              <---------At4g35610           -----       <---------ALFIN1      <<<<<<<<<<<<<<<<<LFY     <---------SPL7         --------->ARR14(2) <----     ------>ZmHOX2a(1)      ----------------->AGL1    ----------->HVH21      <---------ARR14(2) <---- --->WRKY12       <-----------------AGL1             --------->ANAC58      ------->GAMYB        ----- ----->HVH21     ------>NtERF2                       --------->ANAC58   --------->MYB52(1)      ----- --->WRKY45     <---------ALFIN1                    <---------LBD16     <---------DOF5.7(2)     <---- --->WRKY38(1) --------->MYB46(3)         <-----------RAV1(1)   <-----------RAV1(2)             ----- ---DOF2     --------->ANAC46----------->RAV1(1)  ----------->HVH21   --------->DOF5.7(2) --------->MYB52(1)   acctctcctccatctcccccacccttttatgcaacaatgggaaattgttgctctcacggacgggactcagccgataacggagacgcattggaaaacggag  3937200                                         <---------HSFB2a(1)                                         --------->HSFC1(2)                                         <---------HSFC1(2)                                         <---------At4g35610                                 ------>MYB46(1)                                         --------->HSFB2a(1)                                 ------>MYB83                                     --------->LBD16                                       <---------MYB59  <---------At4g35610               --------->ANAC46                                       --------->AtMYB61  --------->At4g35610              --------->LBD16                                         ------->GAMYB -----HSFB2a(1)                    <---------LBD16                <---------ALFIN1       --------->ANAC58 ---->At4g35610                    >>>>>>>>>>AtSR1              --------->ANAC58         --------->ANAC58 -----ZAT2                        ------->GAMYB                 --------->ANAC58   ----------->RAV1(2) -----At4g35610                   --------->DEAR3(1)     --------->YAB1           ------>ZmHOX2a(1) ---->ZAT2                       --------->MYB46(3)     <<<<<<<<<ARR2<---------ALFIN1------>ZmHOX2a(1) ---->HSFC1(2)                  ------>MYB46(1)         <---------ATHB12 ------>ZmHOX2a(1)--------->MYB46(3) -----HSFC1(2)------>NtERF2     -------->P       --------->SPL7 --------->AtLEC2 <---------ALFIN1 ---->HSFB2a(1)                 ------>MYB83 --------------->AtSPL8------->TEIL------>ZmHOX2a(1)   cttccgcttcaaatgctgccaattcgactggtccaaccgcggaagcttctgtaccacaatcaaaacatgcacctccttctcctcctcctgcaaccaaaca  3937300                                                                                              -------                                                                                        <-----------HVH21                                                                                       --------->bZIP60(1)                                                                                     <---------ANAC58                                                                  --------->ZAT2     <------MYB83----                                                  <---------GLK1(2)       <---------ATERF1(1) <------                                    ----------->GT1   <----------DOF2<---------LBD16 <---------ANAC58                      <---------ETT(2)        <-------TEIL       --------->ARR11(3)  <------MYB46(1)                      --------->ETT(2)  ---------->DOF2      ---------->DOF2 ------>NtERF2  <--------   aggccctataggccctgtcttaggtcgacccatggaagatgtaaaagcttcatattctttagggaaagagctcgggcgaggccaatttggtgtcacacac  3937400      --------->ANAC46 --------->ZAT14 <---------ZAT14 <---------ZAT18 --------->At4g35610                     --------->ATHB12          --------->ANAC46 <---------At4g35610                    <---------YAB1             --------->ANAC58               <-- -->ANAC46                     <---------ANAC58          <---------ANAC58        <------ZmHOX2a(1)--- ----->AtMYB61----------->RAV1(1)  <---------AtLEC2      <---------ANAC58      <---------TOE2(3)  --- ---ALFIN1 --------->ANAC58    <---------ANAC46      ---------->DOF2     --------->ARR11(3)       <-- -ALFIN1   --------->ANAC58    <---------ANAC58  ---------->DOF2   --------->ANAC58              ----   ctctgcacacagaaggcaacaggtcatcaatttgcttgcaagacgattgcaaaaagaaagcttgtaaacaaggaagacattgaggatgtaagaagagaag  3937500  Previous    Next  AGI:  At5g12180.1    Description:  CPK17 (calcium-dependent protein kinase 17); calmodulin-dependent protein kinase/ kinase. similar to CDPK6 (CALCIUM-DEPENDENT PROTEIN KINASE 6), calmodulin-dependent protein kinase/ kinase [Arabidopsis thaliana] (TAIR:AT4G23650.1); similar to CPK34 (calcium-dependent protein kinase 34), calmodulin-dependent protein kinase/ kinase [Arabidopsis thaliana] (TAIR:AT5G19360.1); similar to CPK21 (calcium-dependent protein kinase 21), calmodulin-dependent protein kinase/ kinase [Arabidopsis thaliana] (TAIR:AT4G04720.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN62888.1); similar to calcium-dependent protein kinase 17 [Nicotiana plumbagi Range:  from: 3937025    to: 3939597    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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