Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                          <------ZmHOX2a(2)                                                       --------->AGP1                                                       --------->ARR11(3)                --------->CCA1(2)                                                       <---------ARR11(3)              --------->YAB1                                   ============================HOX2a_HOX2a            --------->ICU4                             ------>ZmHOX2a(1)         <---------ARR14(2)             <---------YAB1                             ==================================HOX2a_HOX2a        --------->LBD16                             ===================================HOX2a_HOX2a      --------->TOE2(3)                             <----------DOF2--------->ARR14(2)                   --------->ANAC55(2)                      --------->YAB1        <---------ARR14(2)                   --------->ANAC46 ---------ICU4        <-----------GT1   --------->TOE2(3)------>ZmHOX2a(2)       <---------ANAC55(2) -----AHL20(2)     <---------ICU4  ------>ZmHOX2a(1)   --------->ARR14(2)     --------->ARR14(2) ---->AHL20(2)    ------>ZmHOX2a(1)=============================HOX2a_HOX2a   <---------ARR14(2) ----WOX13(1)    <---------MYB59  --------->TOE2(3)   <---------GLK1(1)       --------->GLK1(2)  ----   aattaagaccctacttgttcctaatcacatccttttcctaaacctatatacgcttgagatctgtctaaacaatatgagacaatccgtaatgatatggcta  3889700                                                                                          --------->At4g35610                                                                                    --------->YAB1                                                                                    -------->ATHB1                                                                                    <---------ICU4       --------->RAP2.6(3)                     --------->HSFB2a(2)                 --------->ICU4     <---------GLK1(1)                         <---------HSFB2a(2)               --------->WOX13(1)    <---------ARR11(3)                   <---------YAB1              <---------WOX13(1)   <---------At4g35610    --------->ARR11(3)        <---------MYB46(3) ---------->DOF2   --------->ATHB12<---------ATHB12 ----->REM1(1) <---------ATHB12    <---------TOE2(3)  --------->CCA1(2)   ------>ZmHOX2a(2)   catcaagatttcggcaaatcgttgagaaacaattgttgatgttatttttctaaaagagatggttttgtttcattgatccaatgcaatcattcatctccaa  3889800                                <---------YAB1                           <---------ANAC55(2)                           <---------ANAC58                           <---------ANAC58                           --------->ANAC55(2)                      --------->YAB1                      -------->HAHB4                      --------->ATHB12                      <---------ICU4                     <---------YAB1                     <---------ATHB12                     --------->ICU4          --------->ANAC58                             <---------AHL20(2)                    <---------TOE2(3)        --------->ANAC58                           --------->CCA1(2)                 <---------AHL20(2)      --------->GLK1(2)                             <---------ARR11(3)                 --------->AHL20(2) ---------->DOF2            <-------TEIL<------ZmHOX2a(1)        - <-----------HVH21 --------->YAB1--------->YAB1               --------->CCA1(2)        --------->ARR11(3)   ttgtgtcaaatatacaaattttaatgattacttgattataaagaatcaagaaacaacttctgagatacatttctataggaaaatgttgagatataatctc  3889900                                                                          --------->AtLEC2                                                                       <-------TEIL                                                                    <------MYB46(1)                                                                    <------MYB83                                                                   --------------->AtSPL3                                                                   --------->MYB111(1)      --------->TOE2(3)                                            --------->MYB59     --------->YAB1                                                <---------------AtSPL8     <---------ICU4                                           <---------YAB1     --------->ATHB12                                         --------->AHL20(2)    --------->ICU4                     --------->AHL20(2)     <---------AHL20(2)    <---------ATHB12       <------ZmHOX2a(1)            ----------->RAV1(1)                      <--- -------->AHL20(2)     <---------YAB1  <---------AHL20(2)  <---------ARR11(3)                    ----   cataaaatcattagtttctcacattatgaggaaaatgacatataaattgggcattggacaacatattattaggtacatgcacacataaacaaattgaagt  3890000                                                           <-------GAMYB                                                          ------>ZmHOX2a(2)                                                          ===========================HOX2a_HOX2a                                                         <------ZmHOX2a(2)                                                     ------>NtERF2                                                 --------->ANAC46                                                <-------MYC3                                                ------->MYC2                                                ------->MYC3             --------->ANAC46                                                <-------MYC2<---------MYB52(1)                                               --------->ANAC46         <-------TEIL                                               --------->ANAC58    ----------->TBP                                               --------->ANAC58<---------ANAC46                                             <---------ALFIN1  <---------ANAC58                                    --------->ANAC55(2)  ============================HOX2a_HOX2a              ------>ZmHOX2a(1)     <---------ANAC55(2) --------->ARR11(3)             <---------MYB59        <---------ANAC55(1) <---------ARR11(3)    ------>ZmHOX2a(1) ------>ZmHOX2a(1)             <---------At4g35610 <------NtERF2 <-----------TBP ------ARR14(2)                --------->At4g35610------>NtERF2<---------ANAC58                  ---- ----->ARR14(2)   --------->TOE2(3) <---------ANAC46--------->DEAR3(1) <-----------GT1        <------   atcctctagtatggtcctaacatcaatatggtcagcatacgtgaacaacacgcgccgagatcgttgcttatatatacgtcctctctccctcttcttctat  3890100                      --------->ANAC58                                   ---------->ID1      ---------->ID1  --------->ANAC58             <---------GLK1(2) <----------DOF2     *TSS         <---------HSFB2a(2)      --------->ANAC55(2)    ------>ZmHOX2a(1)         <-------- ----->YAB1       --------->HSFB2a(2)      <---------ANAC55(2)<------------------------ANAC81 ---CCA1(2)   <----------DOF2      ------------>MYB.PH3(1) <----------DOF2         <---------YAB1   cttcattcgtcgtcttctttctgcaagaaaaacaaaaaaacagttacgagacataatctctctttttcctcctttgtctcttcttctcattcttctttgt  3890200                                           ------>ZmHOX2a(1)             --------->YAB1       <---------MYB52(1) ------>ZmHOX2a(1)            <-------TEIL         <-----------HVH21   <---------HSFB2a(2)         ------>ZmHOX2a(1)    --------->YAB1               <-----------TGA1    --------->HSFB2a(2)        --------->TOE2(3)   <------ZmHOX2a(2)            --------->ANAC46     ================================HOX2a_HOX2a --------->WOX13(1)    ---------->DOF2    --------->ANAC46 <XXXXXXXXXXXXXXXXXXXXMIR4243    ---------- --DOF2    --------->AtLEC2 <---------GLK1(1)<---------ALFIN1                 <------ZmHOX2a(2)------   tatcgatcaaaacatgcataaatccaaaagaaacccgtcattctcctccactctcctcgatgaaatctacaattccatcgatcctaaaacccaaaaaaca  3890300                                                                   --------->LBD16          <------NtERF2                                            ----------->GT1         <---------RAP2.3(1)                                     <---------LBD16         <---------DEAR3(2)                                    <---------WRKY18(1)        --------->ETT(1)                                      ----------->HVH21        <---------DREB2C(2)                                   ------>ZmHOX2a(1)        <---------DEAR3(1)                                    =============================HOX2a_HOX2a        <---------RAP2.3(3)                               <---------ARR14(2)        <---------RAP2.3(2)                               --------->ARR14(2)        <---------RAP2.6(2)                             <---------MYB46(3)       --------->RAP2.6(3)                              <---------DEAR3(2)       --------->DDF1                                  ==============HOX2a_HOX2a     <-----------RAV1(1)                               ------>ZmHOX2a(2)            ================= --------->TOE2(3)                                    ===============HOX2a_HOX2a    ------>ZmHOX2a(2) <---------DAG2                                       <------ZmHOX2a(2)     <---------At5g28300 --------->TOE1(3)  --------->ZAT6                   <---------ARR11(3) <---------ARR14(2) >DOF2<-----------HVH21         ---------->DOF2      <---------ARR14(2) --------->ARR14(2)          < --->ANAC46       <-----------GT1 --------->MYB52(1) --------->ARR14(2)--------->GLK1(1)  <----------DOF2   caaccttatgtcggctctgttaacactactaccaaaaaacagagcattgtgacaagatcggttcctgaccggaaaatccaccgtgatcgtttctttggct  3890400                                                             --------->ANAC58                                                             --------->ANAC58                                                           --------->MYB52(1)                                                         <---------MYB52(2)                                                     <---------MYB59           ------>ZmHOX2a(1)                         <---------MYB52(2)           <---------At4g35610                     ------>MYB46(1) <---------ARR14(2)                                ------>MYB83--------->At5g28300          <-------- <---------ARR11(3)                              --------->DEAR3(1)                      <---------MYB52(1) --------->ARR14(2)                              <---------MYB46(2)                     <---------RAP2.6(3) ------->TEIL                                   --------->ANAC46                        <-------GAMYB =================HOX2a_HOX2a   <-----------GT1 --------->ANAC58                  --------->HSFB2a(2) ---------CCA1(2)     --------->ZAT6            --------->ANAC58                  <---------HSFB2a(2)   ctgtatcttcttcctctgattccaactctagtattttctcatcttcagacaccgaactaactcacggtaagaagacaacttcttctaggccgttatgttt  3890500                                                                                                 <---                                                                                                -----                                                                                                <----                                                                                                -----                                                                                                -----                                                                                                <----                                                                                                -----                                                                                                -----                                                                                              ------>NtERF2                                                                     --------->ZAT18         --------                                                                     <---------SPL7          --------                                                                     <---------ZAT14       ------>NtERF2                                                             ========================================                                                             -------->P                    <---------ATERF1(1)                                                             --------->MYB52(1)        <---------ANAC55(2)                               <------ZmHOX2a(1)          <---------At4g35610          --------->ANAC58                               ----------->GT1            --------->At4g35610          --------->ANAC46                   --------->ANAC58                      --------->AGP1--------->SPL7  --------->ANAC58                   --------->ANAC58                      <-----------ARR10  ------>NtERF2 --------->DEAR3(1)   ------>ZmHOX2a(1)          ----------->GT1    XXXXXXXXXXXXXXXXXXXX>MIR399B/C  <---------YAB1 <---- -YAB1    ------------------------>ANAC81        --------->AtMYB61   --------->ZAT14--------->ARR14(2)   cggtccttctaagacaaaaccaagaaaaacagaggataaaactctgttccaccaaaacagagctacccgagtgtacgacgactacgattacgcctccgac  3890600  Previous    Next  AGI:  At5g12050.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO45643.1) Range:  from: 3890105    to: 3891514    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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