Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                             --------->HSFB2a(1)                                                           <---------HSFB2a(1)                                                           <---------HSFC1(2)                                                     <------ZmHOX2a(1)                                                 --------->LBD16                        <---------MYB52(1)                                                <---------HSFB2a(2)                    <-----------HVH21                                                --------->HSFB2a(2)                    <-----------TGA1                                                <---------ANAC46                      --------->DEAR3(1)                                             <---------ARR14(2)                    --------->ANAC46                                             --------->ARR14(2)            --------->TOE2(3)                                           <---------MYB46(3)--------->GLK1(2)   <---------ALFIN1   -         --------->ANAC58                 <---------TOE1(2)--------->HSFC1(2) --------->REM1(1)     <         --------->ANAC58               <----------DOF2 <------ZmHOX2a(1)  --------->TOE1(3)     ---- -->YAB1 --------->ANAC46      <----------DOF2 <---------LBD16      --------->ZAT6------->GAMYB -----   aaaacaaactcaagcaacttgaacttgaattgtctttggtttctttggttccggaggaggaagtttctgaacagtaaccttcaacacaccgtcatgacaa  3882500                 --------->ARR14(2)        ------>ZmHOX2a(2)       <------ZmHOX2a(2)      <---------ARR11(3)      --------->ARR14(2)      <---------ARR14(2)      --------->ARR11(3)      <---------ARR14(3)      --------->AGP1      --------->ARR14(3)                --------->HSFC1(2)     --------->GLK1(1)                  <---------HSFC1(2)     <---------GLK1(1)            <---------At4g35610    ----------->ARR10         --------->ANAC58 -------->At4g35610           --------->ANAC46 ---------At4g35610           --------->ANAC58------>ZmHOX2a(1)                         <---------ALFIN1 ------>DOF2     <---------ARR14(2) ------->GAMYB   ------->TEIL                     --------->ZAT14 ---->MYB52(1)   --------->GLK1(2)--------->At4g35610   -------->P          ------>ZmHOX2a(1)   acagcagagatcttgtccaaatctgcattttcaggcaactgaaacttcctcatgaacttacccattcttctctccatcctcacatacttcacaccttcgt  3882600                                                                   ------>ZmHOX2a(2)                                                                 <---------ARR11(3)                                   --------->ANAC58     ----------->HVH21                                   --------->ANAC58   ----------->RAV1(2)                           --------->MYB46(3)     --------->HSFB2a(2)                          --------->ANAC46        <---------HSFB2a(2)       <----------DOF2                        <---------ALFIN1     <---------ANAC58--------------------->WRI1               ------>NtERF2--------->ANAC46 <---------ANAC58--------->TOE2(3)       --------->LBD16 <----------DOF2       --------->ZAT14      ---------->ID1 ------->TEIL<---------At4g35610      -----   tttctttgttctctctctgcctctctccactcaccacaagcacattgtcgttctcgacctgaaccttgatctcatctcctttgattccaggcatgtccac  3882700                                       --------->ALFIN1                                       <---------REM1(1)                                     --------->At4g35610                                  <---------At4g35610                                <-----------RAV1(2)                              <<<<<<<<<<<AtbZIP1                              <-----------TGA1                              <-----------HVH21                             ====================================bZIP_DOF                             <---------bZIP60(1)                             --------->bZIP60(1)                                              <------                             <---------O2                                                     -------                             --------->O2                                                     <------                             --------->TGA1a                                                ---------                             <---------TGA1a                                               <---------ANAC58                             <---------TGA2(1)                                             <---------ANAC58                             --------->TGA2(1)                                             <---------ANAC46                             ======================================MYC_MYB                 <---------ANAC55(1)                   --------->ALFIN1<-----------RAV1(2)                                    <---------LBD16                  <---------ZAT18 --------->At4g35610                                  <-------GAMYB                 <---------ANAC58 <---------ZAT2                                      --------->MYB111(1)                 <---------ANAC58 --------->ZAT2                                      <---------MYB46(3)           <---------ANAC58  <---------ANAC55(2)           <---------ANAC58           --------->ALFIN1           <---------ANAC58 <-----------STF1               <---------ANAC58           <-----------RAV1(1)        ------->MYC2        ----------->STF1            ---------->CDC5               --------->MYB55(2)        <-------MYC2       <---------TGA2(2)          --------->TOE2(3)               --------->MYB52(2)        ------->MYC3      ----------->HVH21<---------At4g35610     <---------TOE2(2)  --------->MYB111(2)        <-------MYC3      ----------->TGA1 --------->At4g35610     <---------TOE1(2) <--------P ---->ANAC46 <---------MYB52(1)--------->TGA2(2)      <----------DOF2         ----------->HVH21   gacgaatgcatatgcgttagggtgctcgatgacgtcagcaggtgtagcagccattgccttagcgtctcgcatgtaaactcgtgaagggttgttgcgggtc  3882800                           --------->ANAC58                   ------>MYB46(1)           <---------ANAC46                    ------>NtERF2                 --------->ATHB12                      <---------YAB1                  --------->LBD16                <---------YAB1      >>>>>>>>>>>>>>>>>LFY      <-----                 --------->HSFB2a(2)             --------->ICU4  ------>ZmHOX2a(1)    <---------ANAC46 -----ARR10      <---------HSFB2a(2)     <------ZmHOX2a(1)    ------>MYB83  <---------MYB52(1)<------ -->ARR14(2)    <---------LBD16       <---------HSFB2a(2)  <---------HSFB2a(1) <-------GAMYB  <------ ---ARR14(2)   <---------LBD16        --------->HSFB2a(2)  --------->HSFB2a(1)--------->MYB52(2)    - >LBD16  <---------AtMYB61 --------->ANAC58   <---------TOE2(3) --------->TOE2(3)  <-----------RAV1(1)   ttctcgttgttgtggtcttcggggacttcaagcatgtcttcgaggattgagattattggaaaccttcctaaatccattgttagttgtgttgtgtttgctt  3882900                                                                                               <-----                                                                                               ------      <----------DOF2         <----------DOF2                                                 <------ZmHOX2a(1)  <---------GLK1(2)<---------DAG2                                                        <---------HSFC1(1) -----DOF2         <----------DOF2                                              ----------->GT1<----- ---ANAC58        <---------ANAC58                                    <------ZmHOX2a(1)  --------->HSFB2a(2) ---ANAC58        <---------ANAC58                             --------->AHL20(2)  <---------CCA1(1)- ----->ZmHOX2a(1)---------->ID1        *TSS            --------->ALFIN1  --------->ALFIN1<---------HSFB2a(2)   tcctgattctttgattcttggctttttgttttctttgatgagtttgatgtgagaaatgtggggacttaaataggagtggagatggatatttctagaggat  3883000                                              --------->HSFC1(1)                                              <---------HSFB2a(2)                                              --------->HSFB2a(2)                                              <---------HSFC1(1)                                       <------------CBF                                    <---------ANAC58                                    --------->ANAC55(2)                                    <---------ANAC55(2)                                    <---------ANAC46                                    <---------ANAC55(1)                              <---------ARR14(2)          <------------CBF    --------->ARR11(3)                                          <---------TOE2(2) ----ARR14(2)                 <---------ARR11(3)                            --------->ZAT14 --->ARR14(2)         <----------DOF2--------->LBD16                        <---------ZAT18 -------CBF <-----------RAV1(1)     <---------ANAC58                        --------->ZAT18        -- -------->ETT(2) <------NtERF2--------->ARR14(2)             <---------MYB46(3)          <-----------RAV1(2)   tgtcgagagagcgattgtcgcggtctttagaagttcttccgtattgttcgagaaacgtcttggtcgttctggtttttgtgaactctgtaactcaggtttg  3883100                                                            --------->AHL20(1)                                                            --------->ARR11(3)                                                 <---------AHL20(2)                                                 --------->AHL20(2)                                 -                                 --------->ARR11(3)     <------ZmHOX2a(1)                       -----                            --------->AHL20(2)  --------->AHL20(2)         ----------------->AG<-----                <----------DOF2  <---------ARR11(3)   --------->MYB59      ----------------->AGL1  <- ------->AHL20(2)      <---------GLK1(2)     <----------DOF2<---------ARR11(3)                 ------   ataaaatatgagccataactttacagaatttttaatatctatatgggcttttaaattaggaatatatcaaggcccattccatatgtgaaaatagttcatg  3883200                                                   --------->ARR14(2)                                                   --------->GLK1(2)                                                   <---------ARR14(2) -------->YAB1                                    <---------GLK1(1)                               <-- ---->ATHB12                <----------ID1       <------ZmHOX2a(1)                             ------ ----YAB1               <---------AHL20(2)     <---------TOE2(3)                              ------- ------TEIL             --------->AHL20(2)     <---------TOE1(3)                              <------ --->ICU4  <---------ZAT6---------->DOF2   <----------DOF2                ---------->DOF2    --------   attcataagattagtgttttagcaaattaaagaacaaattttgtgatttaaggaatccgaacaatattgctcattttaaagaatacattcaactggaaag  3883300                                         ------->TEIL                                        <---------ALFIN1                                      --------->ANAC58                 -------->HAHB4                                      --------->AtLEC2                 <---------ICU4 -----TEIL                            --------->ANAC58                 --------->ATHB12 ----->GT1                    --------->ZAT18                         <---------ATHB12 -------->AtSPL8              <---------ZAT18     <------ZmHOX2a(2)   --------->ICU4 ---------AtSPL8              <---------ZAT14    <---------ARR11(3)   <---------YAB1          ------- -->DOF2                      --------->ZAT14    --------->ARR11(3)--------->ICU4             <------   tacatacaattgctgaagacttggattacaagtgtacaacatgcacctcaagatcagaagttcaaagtcttaatgatggaaacaagactaaattagtata  3883400  Previous    Next  AGI:  At5g12020.1    Description:  HSP17.6II (17.6 KDA CLASS II HEAT SHOCK PROTEIN). Identical to 17.6 kDa class II heat shock protein (HSP17.6II) [Arabidopsis Thaliana] (GB:P29830); similar to AT-HSP17.6A (Arabidopsis thaliana heat shock protein 17.6A) [Arabidopsis thaliana] (TAIR:AT5G12030.1); similar to 17.6 kDa class II heat shock protein [Brassica rapa] (GB:ABV89637.1); contains InterPro domain HSP20-like chaperone (InterPro:IPR008978); contains InterPro domain Heat shock protein Hsp20 (InterPro:IPR002068) Range:  from: 3882238    to: 3882939    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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