Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100             <---------YAB1         <---------ICU4                            --------->TOE2(3)         --------->YAB1              <---------AHL20(1)        <---------ATHB51             --------->AHL20(1)        --------->ICU4               --------->ARR11(3)        <---------ATHB12            --------->CCA1(2)      --------->WOX13(1)           <---------ARR11(3)                 <---------WOX13(1) <-------TEIL           <---------At4g35610     <---------ALFIN1    --------->ATHB12   --------->ANAC58 --->RAV1(2)            --------->At4g35610  --------->AtMYB61     <---------YAB1      --------->ANAC58 ->At4g35610--------->YAB1         --------->ARR11(3)              --------->ICU4   --------->TOE1(2)   aaattcatcaattatgatcaaatgtgagcttcccatagatatattgaccacaacctctaactcatcaccatgattgatatgaaaaacccaagaaaacatc  3861100                                                                                                -----                                                                                                -----                                                                                                -----                                                                                                <----                                                                                                -----                                                                                              -------                --------->TOE1(2)                                                            <-------          --------->LBD16                               --------->ANAC46                    ------>MYB83         --------->ANAC46                          <---------GLK1(2)                        ------>MYB46(1)         --------->ANAC58                          --------->ARR14(2)                      --------->WOX13(1)         --------->ANAC58                          <---------ARR14(2)                <---------REM1(1)        <---------LBD16                            <---------MYB52(1)               --------------->AtSPL8      --------->DEAR3(1)                 <------ZmHOX2a(2)     <-----------GT1      <---------------AtSPL8   gaatcgagcctccgcaatactacgaatcagacaattcaactcgatccaattccgatactcgaaattcacaaaatttcatcaaattagttgtaccaatcac  3861200                                                                <-------TEIL                                                                ------>ZmHOX2a(2)                                                              --------->ARR14(2)                                                              --------->AGP1                                                              --------->ARR11(3)                                                      <---------ICU4                                                 <---------MYB52(1)     <---------ARR14(2)                         --------->TOE1(3)                      <---------ATHB12     --------->ARR14(2) --------->WOX13(1)      --------->TOE2(3)        --------->AHL20(2) ---->ANAC58        --------->GLK1(1)          <---------ANAC46<------ZmHOX2a(2)     --------->WOX13(1) ---->ANAC46       <---------ARR11(3)          <---------ANAC55(2)      <---------ATHB12 ---->ANAC58       --------->ARR14(2)          ----------->GT1<---------ARR11(3)  --------->ANAC58 -----ANAC55(2)  --------->LBD16     --------->HSFB2a(2)      <---------ARR14(2)  --------->ANAC58--- ---->ANAC55(2) <---------HSFB2a(2)  --------->HSFC1(1)      <---------GLK1(1)  <---------ANAC58  --- -->YAB1        --------->HSFB2a(2)  <---------HSFB2a(2)     --------->GLK1(1)  <---------ANAC58----- --ATHB12   --------->GLK1(1)        <---------HSFC1(1)<----------DOF2--------->WOX13(1)--------->YAB1   gaaatcgaattcgaatttccagatatcaatcggcaatttctcgaaaattacgttaatctttagagatccgtccaatcaaatagcatgcaatcaaaatcca  3861300        --------->DAG2                                                               <---------ZAT18      ---------->DOF2                                                                --------->ZAT18    --------->YAB1                                        --------->MYB52(1)   --------->YAB1   <---------ATHB12                                    --------->TOE1(3)      <---------YAB1 --------->WOX13(1)                                  <---------TOE1(3)      <------ZmHOX2a(1)   ----- ------>ANAC58                  --------->LBD16  --------->TOE1(3)         ----------->GT1     ------ ------>ANAC58              --------->GLK1(2)  --------->ARR11(3)     --------->ALFIN1         <----- ----->DOF2        ---------->DOF2             <---------ARR11(3)    <------ZmHOX2a(1)        <------   aagcaatcaaaagggggagacaaaagagaaattccgaagaatagagagagaccttaagcttaagggagagaggagggaggataatagtgcccttcttctg  3861400                               <------NtERF2                              --------->ANAC58                              --------->RAP2.6(2)                              --------->ANAC58                           <---------MYB46(3)                           <---------ATERF1(1)                           ------>NtERF2                           --------->ABI4(2)                          --------->ALFIN1                         --------->ATERF1(1)                         <------NtERF2                         <-------GAMYB                         ==========================================MYC_MYB                        <---------MYB46(3)                        <---------DEAR4(2)                        <---------DEAR3(2)                        <---------ATERF1(1)                       <---------DREB2C(2)                       <---------DEAR3(1)          --------->ARR14(2)  --------->ANAC46          <---------ARR14(2)--------->ATERF1(1)  <---------HSFC1(2)   --------->ALFIN1  --------->HSFC1(2)  <---------ABI4(1)                   <-------MYC3  <---------HSFB2a(1)------>NtERF2                       <---------TGA1a  --------->HSFB2a(1)--------->LBD16                     --------->TGA1a             --------->TOE1(2) --------->GLK1(2)  <---------LBD16   <---------MYB52(1) --------->O2       <------NtERF2 ---->LBD16         <---------RAP2.6(2) --------->MYB46(2)------->MYC3     ------>NtERF2 --->HSFB2a(2)      <---------RAP2.3(2) --------->MYB59  <---------O2     --------->DEAR3(1) ----HSFB2a(2)     <---------LBD16   <-----------HVH21   ============================================ ---LBD16<---------RAP2.6(3)<------NtERF2              <---------ALFIN1  --------->RAP2.3(1)     <---   gagaaccttgccgatattgtttccggcggtggccgcaagcgttaggcaaatcgattcccacatgtctctcaaaacgccgacgagaaacgaaggaagaagc  3861500                                         --------->AHL20(2)                                        <---------YAB1                                      <---------ICU4                                      --------->YAB1                                     <---------YAB1                                     --------->ICU4                          <---------TOE1(2)                                  <---------MYB52(1)                      <---------ANAC58                                 --------->TOE2(3)                ----------->HVH21               <---------YAB1   <---------ANAC55(2)        <-----------GT1<---------ANAC46             --------->ATHB12   --------->ANAC55(2)  <---------MYB52(1)   <---------ANAC58         <-         <------ZmHOX2a(1)     <---------TOE2(2)   <---------ANAC58     <-----------HVH21         <-- <---------AHL20(2)            <---------TOE1(2)   <---------ANAC58>>>>>>>>>WRKY18         <--------- =======bZIP_DOF*TSS        <---------ANAC58 <-----------GT1<-----------GT1 <---------ANAC46   <----- -------DOF2--------->ICU4  <---------ANAC58 <---------AHL20(2)<----------DOF2       ----------->GT1   tttttaatggaggaatgatttttgccgatgtcttacgttattattatttacttccgtttttttaacttttgacaggtcgtgggtatatagtaatttcctt  3861600                                                                                 <---------AHL20(2)                                                                                 <---------YAB1                                                  <---------ANAC58   <---------ARR11(3)             <         --------->YAB1                           <---------ANAC46   --------->GLK1(2)         ------    ------------>CBF                              <---------ANAC58   --------->ARR11(3)        <----- --------YAB1      --------->YAB1  <---------AHL20(2)               --------->RVE1(1)    <----------DOF2 ---------TBP      ----------->GT1--------->AHL20(2)             --------->YAB1<----------DOF2 <----- --GT1 <------------CBF   <----------ID1       <----------DOF2  --------->AHL20(2)  <---------WOX13(1) -----DOF2        <---------TOE2(3)--------->AHL20(2)       --------->AHL20(2) --------->TOE2(3)    -   ttttatagcaattgtattctatggtaaaaaaacaaaattaatctctatgctttcgtgttcaaaaaaataaaaatctctatactttaattgactttaaaaa  3861700          <---------AHL20(2)          --------->AHL20(1)          <---------AHL20(1)         --------->YAB1         --------->AHL20(2)        <---------YAB1     <---------AHL20(2)                       <------NtERF2     --------->AHL20(2)                      ----------->GT1             --------->ANAC46     --------->AHL20(1)                   --------->At4g35610            --------->REM1(1)     <---------AHL20(1)                ---------->DOF2             <---------ANAC58 ---------AHL20(2)                --------->AHL20(2)               <---------ANAC46 --->AHL20(2)                    <---------AHL20(2)           --------->MYB52(1) ----AHL20(2)                    --------->AHL20(2)        <---------At4g35610               <------- ----AHL20(1)                --------->AHL20(2)   ---------->DOF2  <---------ANAC58     <---------AHL20(2) -------->AHL20(2)       ---------->DOF2  --------->ZAT2   --------->At4g35610<---------ANAC55(2)  --   atttaaatttattatattgttgaatacaaaagaaaataaataaaagctggcaaaaagacacagctaatggcgtttacatcacatgtccatttttttcaca  3861800                <---------------AGL15                                       ------>MYB83     <----------ID1                                                         ------>MYB46(1)   --------------->AtSPL8                                                 --------->TOE1(2)        <-   <---------------AtSPL8                                         <---------ZAT6                 <---  ---------->DOF2           --------->AHL20(2)              <-----------HVH21           --------->AHL20(2) ----GT1        --------------->AGL15             ------->TEIL    ----------->GT1 ----------->GT1---- ------->AHL20(2)    ---------->DOF2           ----------->GT1  <---------ANAC46---------->DOF2<-----   ttttaaaagtacaaaatacttcaaaaagaattaaaaaacagttttgcaaatgtaactacaaatgtcaagtgtaaaacctagcaaaagaaaaaaaatgtta  3861900             --------->ANAC46  <---------YAB1                                      --------->TOE1(3) --------MYB52(1)                                     --------->TOE2(3)                           <-- ------ANAC55(2)                                >>>>>>>>>RAP2.2                                 ----- ----->ANAC55(2)      --------->AHL20(2)        --------->TOE2(3)   <---------RAP2.6(2)        <----- ------GT1<-------TEIL<---------AHL20(2)  --------->ANAC46          <---------ANAC46---------->DOF2--   cgttatgaaatatacatgctacatataaatgtaaatgtgtatacaaacaatctaaaccttaaaacatgtttcggctattctcttgcaaaagaccaatatg  3862000  Previous    Next  AGI:  At5g11960.1    Description:  similar to hypothetical protein [Vitis vinifera] (GB:CAN81798.1); contains InterPro domain Protein of unknown function DUF6, transmembrane; (InterPro:IPR000620) Range:  from: 3858580    to: 3861516    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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