Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                             ===============HOX2a_HOX2a                                                                           ------>ZmHOX2a(2)                                                                          ================HOX2a_HOX2a                                                                         <-----------ARR10                                                                         --------->ARR11(3)                                                                         <---------AGP1                                                                         <---------ARR14(2)                                                                         --------->ARR14(2)    --------->DEAR3(1)                                         ----------------->AGL3 <---------ALFIN1                                              --------->MYB46(3) --------->AtMYB61            --------->ARR14(3)               ====================================== --------->RAV1(1)            --------->GLK1(2)              <---------ARR14(2) ----->At4g35610              <---------ARR11(3)          <---------ANAC55(2)      ------>ZmHOX2a(1) ----->ZAT14                  <---------ARR14(3)     --------->YAB1      <---------ARR11(3) --->ANAC46     ------>ZmHOX2a(1)         <---------YAB1  <---------ANAC58<------ZmHOX2a(2) --ALFIN1 XXXXXXXXXXXXXXXXXXXX>MIR782   ----------->GT1   <---------ANAC58--------->GLK1(1)    <----- ->RAV1(1)<---------ALFIN1    --------->ARR11(3)  <----------DOF2   --------->MYB52(1) ---------->DOF2   gcaccacagcccaaactcctcaaatgctccaaaatcttgagattgttattagctttaatagcgtaaccaataacagatctcactccttccaaagcctctt  3829600                                 <---------------AGL15                            --------->TOE2(3)                                 --------------->AGL15                            -------------------                         <---------TOE1(3)                               --------->ARR11(3)                         <---------TOE2(3)                               <---------ARR11(3)                      ------>ZmHOX2a(2)                                 <---------GLK1(1)                     <---------At4g35610                --------->HSFB2a(2)     ------->TEIL --------->ANAC46    --------->At4g35610          <---------MYB46(3)    --------->GLK1(1)    -------- ================================================MADS_MADS             <---------ARR11(3)    -------- -----DOF2          <---------ARR11(3)     ---------->DOF2            --------->YAB1 <---------MYB46(3)   tataagcctcaaggtttctcgtgatctgaggtttgctatataagtaaaagggtcgtttctcgactgtttccatgatatcttgaaccttggttccttcgca  3829700                                                                                                  <--                                                                                                 <---                                                                                               ------                                                         <---------ANAC58                      ------                          <<<<<<<<<<<<<<<<<LFY           <---------ANAC46                    <-------                     <---------ANAC58                    <---------ANAC58                  <------NtERF2                     <---------ANAC46         <---------At4g35610                         <---------RAP2.3(1)                <---------ICU4             <------ZmHOX2a(1)                              ------>NtERF2                --------->ATHB12   --------->ETT(2)--------->GLK1(2)                     <---------RAP2.3(3)    --------->GLK1(1)<---------ANAC58---------->DOF2  <----------DOF2                    <---------RAP2.3(2) -->WRI1       <---------YAB1   <---------MYB46(3)<---------GLK1(2)                      <---------DEAR3(1) ->ANAC58 ----------->RAV1(2)  <---------AtMYB61  --------->ARR14(2)                --------->MYB52(1) ->ANAC58 <---------At4g35610  --------->ALFIN1   <---------ARR14(2)<---------AtMYB61    <---------RAP2.6(2)   atagagaaacccatctgatgatttcttgaaacagtggtcgaaagaggaagcagattctttcgtgagggttttggtggagttttgggaaacggcggctttg  3829800                                                                                                    <                                                                                               ------                                                                                               <-----      <---------ANAC58       <---------ANAC58                                                 <------      <---------ANAC58       <---------ANAC58                                                <-------      <---------ANAC46     <<<<<<<<<<WRKY63                                                --------->ARR14(2) -------ANAC46          --------->YAB1                                                     <---------ARR14(2) ------LBD16      <----------DOF2                           <---------ZAT14             <---------TOE1(3) ----->HVH21     <---------ANAC58                           --------->ZAT14             <---------TOE2(3) --->WRKY12      <---------ANAC58               <---------GLK1(2)                   <----------DOF2<- ---DOF2         <---------ANAC46  <----------ID1--------->GLK1(2)<---------YAB1 --------->ICU4<-----   acggagaggcgtttaagtggcttcaatgttgacttgagagacaaaaatgggattcttgagagtgaagtctgattcaattggtactgatttagggttccgc  3829900                                          <---------ANAC46     --------->ALFIN1                                          <---------ANAC58   --------->ALFIN1                                          <---------ANAC58 <---------ANAC46                                    <------NtERF2          <---------ANAC55(1)                                   <---------RAP2.6(3)     <---------ANAC58                                   ------>NtERF2           <------MYB46(1)                                  --------->DEAR3(1)       <---------ANAC58                                  --------->ATERF1(2)      <------MYB83                                  <---------ATERF1(2)     --------->MYB59                                  --------->ANAC46        --------->MYB52(2)                                  --------->RAP2.3(2)     --------->MYB111(2)       <---------TOE1(3)          --------->RAP2.3(3)     --------->MYB46(2)       <---------TOE2(3)          --------->RAP2.6(2)     --------->MYB111(1)    <---------REM1(1)            --------->RAP2.3(1)     <---------MYB55(1) ---------WOX13(1)               --------->ERF1         <<<<<<<<<MYB98 --->LBD16  <------MYB83       ------->GAMYB     <---------ARR14(2) ----LBD16  <------MYB46(1)   --------->MYB46(3) --------->ARR14(2)             --------->ZAT6 ---ANAC46<--------P          <------------AtMYB77      <---------MYB52(1)--------->ZAT6 --LBD16  --------->ALFIN1  <---------ARR14(2)   <---------ARR11(3)   <-------GAMYB <---------ZAT14 --------ARR14(2)           --------->MYB52(1)   --------->ARR11(3)  <---------ZAT6 --------->ZAT14 ----At4g35610              --------->ARR14(2)  <------ZmHOX2a(1)    <---------MYB46(3)*TSS  --------   ggattgatgaaggttgggagagaaattgagtaactgccgccatggctggaggatttttgttaggtgtgcgactgttacagtaacactgaagggtttagaa  3830000                                  <---------ARR14(2)                                  --------->ARR14(2)                                <---------MYB46(3)   ------------>CBF                                <---------DEAR3(2) --------->ANAC46                               <---------ANAC58    <---------ETT(1)                               <---------ANAC58 --------->ARR14(2)                                 --                               --------->ETT(1) <---------ARR14(2)                          ---------                               <---------ANAC46--------->GLK1(1)                  --------->DEAR3(2)                             <-----------HVH21 <---------GLK1(1)                  --------->MYB46(3)                            <-----------RAV1(1)--------->CCA1(2)      <-------GAMYB     <-------GAMYB  --------->DAG2            ------>ZmHOX2a(1) <---------ARR11(3)     --------->MYB55(2)<---------MYB46(3) ---------->DOF2        <---------ARR14(2)    --------->ARR11(3)     <---------MYB46(3)----------->GT1 --->GT1              ----------->ARR10      <<<<<<<<<RAP2.2       <---------MYB52(1)<---------MYB52(1)   aaaaaaagtcaacaagtttaagagtagttcctgtcgggtccggttttagatatccgacaatatcgaaccggtggttatagtcgaaccgatggttaaaaga  3830100                               --------->CCA1(2)                                              <------                              <---------ARR14(2)                                          <-------GAMYB                              --------->ARR14(2)                                         --------->MYB52(2)                        <----------DOF2                                                <---------MYB52(1)                     --------------->AGL15                                           <---------ZAT6--      ---------->DOF2<---------------AGL15                                        <---------MYB52(1)  <----------ID1    <-----------------AGL3                                       <-------GAMYB<------ -------->DOF2    <-----------GT1                                               <------MYB46(1)  <--- ->DOF2          <-----------GT1             ------>ZmHOX2a(1)    <---------ZAT6<------MYB83  <------   agaaagaacaaagtcgattttaacttcttttggatatggtttttgtccttgggggatagtttctgctagtgtttgttttgttcggttgtgttagttgtgt  3830200        --------->YAB1        <---------ICU4      --------->GLK1(2)      --------->ARR11(3)                     --------->ARR11(3)                       ------>MYB83     --------->YAB1                         <---------GLK1(1)                         -------->P    --------->ICU4                  <-----------HVH21                                 ------>MYB46(1)  --------->YAB1                    <---------RAP2.6(3)                              --------->MYB55(1) ---ANAC46                    ---------->DOF2--------->GLK1(2)                      <---------MYB111(2) --------->GT1             --------->At4g35610                                      --------->MYB46(3) ---ANAC58                 <---------ANAC55(2)                      <-----------GT1 <---------MYB55(2) ----GAMYB              --------->ATERF1(1) --------->GLK1(1) <---------AHL20(2)    <---------MYB46(2) ---ANAC58             <-----------HVH21--------->AtLEC2     --------->YAB1         <---------MYB111(1)   gttgtaataatcttgatgcttaaggggtcacctaaagcagtcatggaaatctagccctatctataaaaatttgccatttctcatcacctaccaatacttc  3830300                                                                                     ------->MYC3                           <------ZmHOX2a(1)                                         <-------MYC2                        <---------At4g35610                                          <-------MYC3                  <----------TaMYB80                                    --------->STY1(2)<---------ANAC46                  --------->GLK1(1)                                 <----------DOF2  ------->MYC2                 --------->ARR14(2)                               --------->ZAT18  ------->TEIL                 --------->ARR11(3)                               --------->ZAT14<---------ZAT14                 <---------ARR11(3)                               <---------ZAT14--------->ZAT14                 <---------ARR14(2)                               <---------ZAT18<---------ZAT18                 <---------KAN4(2)                      <---------TOE2(3)       --------->AtLEC2               --------->LBD16                         --------->MYB52(1)     <---------ANAC58             <---------LBD16    ----------->GT1        <---------DOF5.7(2)    <---------ANAC58      <   tatttgttcgtattatgcggatattcagaggataatgtaaaacattttgttgaatgctaacgatgaagtgctctatctagccgtgcacgttgtggagaag  3830400                                                                                             <-------                                                                                --------->KAN4(2)                                                                               <---------KAN4(1)                                                                               --------->KAN4(1)                                                                               <---------HSFB2a(1)                                   <---------YAB1                              <---------HSFC1(2)                               <---------ANAC58                                --------->HSFB2a(1)                          --------->ARR14(2)                                   --------->HSFC1(2)                          <---------ARR14(2)                              --------->ANAC58   --------         <---------ARR14(2)    <---------ANAC58          <---------ARR11(3)   <---------KAN4(2)         --------->ARR14(2)  <---------YAB1             <---------CCA1(2) --------->ANAC58  <------ZmHOX2a(1) ---------YAB1    <---------MYB46(3)--------->YAB1 <-----------GT1---------->DOF2         --------->MYB59   ttatgttttagaatccacatttgttgaagttatgcttatcatactctcttaattatctatatctattacaaagagcaaggaatgttcttagttaggattt  3830500  Previous    Next  AGI:  At5g11880.1    Description:  diaminopimelate decarboxylase, putative / DAP carboxylase, putative. Identical to Diaminopimelate decarboxylase 2, chloroplast precursor (LYSA2) [Arabidopsis Thaliana] (GB:Q94A94;GB:Q9LYI5;GB:Q9SCX0); similar to diaminopimelate decarboxylase, putative / DAP carboxylase, putative [Arabidopsis thaliana] (TAIR:AT3G14390.1); similar to Os02g0440000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046744.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45513.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47588.1); contains InterPro domain Diaminopimelate decarboxylase; (InterPro:IPR002986); contains InterPro domain Range:  from: 3827527    to: 3829987    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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