Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      <                                                                                                   <-                                                                                                   --                                                                                                  ---                                                                                                -----                                <---------ANAC58                             --------->ANAC58   -----                                <---------ANAC46                             --------->ANAC46   -----                               <---------------AtSPL8               <---------TOE2(3)           <---- --NtERF2                     <---------ANAC46 <----------DOF2  ----------------------->TaNAC69(2)--- >NtERF2          --------->YAB1<---------ANAC58              ----------->HVH21          <---------GLK1(2) ----->RAV1(1)    --------->ATHB12      <-------TEIL       <---------AtMYB61 --------->ANAC58   <---- ---->HVH21      <---------ATHB12  --------->SPL7     <---------MYB46(3)    <---------LBD16   <------   catcgacctctcaatccgaatcatggaccatgttgtgtacgatgcataactttgagttgttgtggtgaccaaggtttccacggctcaactagcttctccg  3812600   <------NtERF2 ---------PCF2          --------------->AGL15 --------ATERF1(1)      <---------------AGL15 ---->NtERF2           ----------------->AG ------>DEAR3(1)       <-----------------AGL3                    --------->AHL20(2) ---->At4g35610        ----------------->AGL2                --------->AHL20(2) ---->LBD16            ----------------->AGL3      --------->ANAC46 ->NtERF2              <-----------------AGL2      --------->ANAC55(1) -----At4g35610       ------>MYB46(1)              <---------ANAC55(2)       <------MYB46(1) ------>LBD16         ------>MYB83                 --------->ANAC55(2)       <------MYB83 -----LBD16      <-----------GT1       <------ZmHOX2a(1)    <---------ATHB12--------->MYB59  <------- ---LBD16  --------->AHL20(2)         ----------->GT1   --------->MYB46(3)<---------MYB52(1) <-------   cgggcctcgacaattcaatataccttccaaatatagcataaggagaatacaactcgtaaccaatgaaataaatcccattaggtctaattgcatatttaca  3812700                                                                            --------->ANAC58                                                                         <---------ARR14(2)         <                                                                         --------->ARR14(2)         -                                                                  --------->ETT(2)                 <-                                                                  <---------ETT(2)             ------                                                    <---------At4g35610--------->LBD16         ------                                                   --------->MYB52(2)<---------LBD16           ------                                                 <---------MYB52(1)<---------WRKY18(1)     <---------                      --------->LBD16     ------>ZmHOX2a(2)       ----------->HVH21       --------->AtMYB61      <-----------HVH21                   =========================HOX2a_HOX2a        <---------ZAT18 --AHL20(2)          --------->DEAR3(1) <---------ARR11(3)   <---------ZAT18--------->ANAC58 <------- ----GT1          --------->DEAR3(1)  ------>ZmHOX2a(1)     ------>ZmHOX2a(1)         --------->ZAT18   tgtttgtccgtcgcatagcatcgccgtagtagacaatgtcctgatctcaacgtttgctgttcctgcgctcgaccggaaacgacaattgtggaccatcacg  3812800               <---------HSFC1(2)      ------>MYB83      --------->MYB52(1)      ------>MYB46(1)    <---------MYB59    --------------->AGL15    <---------MYB46(2)    <---------------AGL15   ----------------->AGL1 <---------YAB1 ---------MYB52(1)    <---------GLK1(1) -------->DOF5.7(2)   --------->ARR14(2) ------GAMYB   --------->HSFC1(2) --->ANAC58    <---------HSFB2a(1) --->ANAC58   --------->ARR14(2) --->ANAC46   <---------ARR14(2)               <---------ARR14(2)                                   - --HVH21     <------ZmHOX2a(1)            <------ZmHOX2a(1)                         ------>ZmHOX2a(2) --ALFIN1  <---------TOE2(3)            <---------TOE2(3)              <----------DOF2              -   ccgttaccaaactgaggaacttcgaattcccattgaaactctgaggatggaaccgatttgtgccatccgatgtctttcttcgatgatcgacaattgtaga  3812900                                                                             <---------ANAC46                                                                    <---------At4g35610                                                                    --------->ZAT2           <-------                                                                    --------->At4g35610 --------->YAB1                --------------------->WRI1                          <---------ZAT2      --------->ATHB12            --------->ETT(2)                                        ----------->RAV1(2) <---------ICU4    <---------ANAC46                                              <-----------RAV1(2)  --------->ICU4  --------->MYB52(1)                                         ------>ZmHOX2a(1)        <---------WOX13(1) --------->DEAR3(1)                                        <---------LBD16   <---------ANAC58<------- ----------->HVH21         <---------ANAC58            --------->ARR11(3)    <---------ANAC58<------- -------->DEAR3(2)         <---------ANAC58            <---------ARR11(3)  <---------ARR14(2)<------- -------->MYB46(3)  <-----------GT1        ----------->GT1 ----------->RAV1(2) ------>ZmHOX2a(1)   aaaccgacgggttatcgacattgtacatttcgtttttgatgagtattgaaaaatcaacatctcctgaatcagctgagtttcctgtttgaatgattacttg  3813000                                                                                     ----------->TBP           --------->AHL20(2)                                     <---------LBD16  <-----------TBP     ----------->GT1                                            <----------DOF2    <---------AHL20(2)    --------->ANAC58                                          ------>ZmHOX2a(1)    --------->AHL20(2)    --------->ANAC58    <----------DOF2              <---------ARR14(2)     --------->MYB52(2) --ANAC58  --------->AHL20(1)                        --------->ARR14(2)   <---------MYB52(1) --ANAC58  <---------AHL20(1)                        <---------GLK1(2)<------------CBF         ------ --ANAC55(2)<---------ICU4                   <---------YAB1 <-----------------AG <-----------TBP  <-- --ANAC46  <---------ARR11(3)       --------->ANAC46<---------At4g35610 <---------MYB46(3)     ------   aaaaacaaggcaaaatattactagggctttcattttctcagccatttcttattcagatactctcctctttcggattgttagttatatatataaacccaag  3813100              <---------WOX13(1)                            ----------->GT1            --------->ATHB12                                --------->At4g35610         --------->YAB1         --------->YAB1              <---------At4g35610       --------->YAB1        ----------->GT1         <--------ATHB1             --------->ANAC58          --------->ZAT6      <------------CBF ------->TEIL  ---------->DOF2  <---------TOE2(3)            --------->YAB1    --------->ARR11(3)--------->MYB52(1)         --------->ATHB12                 <---------YAB1 --->ANAC58 <---------ICU4     <---------YAB1   --------->ICU4                  --------->YAB1 --------DOF2<------------CBF  <---------ATHB51 <---------YAB1           <---------YAB1 --->ANAC58<---------YAB1  ------------>CBF <-------GAMYB  --------->ANAC58  <---------MYB46(3)     <   ctttgtgatattgataattgatatgaacggacaataatagaaagagcgttatgatttatgtaagctaaattagttatgtttgttataatactaatcttgt  3813200                                                                --------->WRKY12                                                                --------->WRKY45                                                                --------->WRKY38(1)                                                          --------->ARR14(2)                                                          <---------ARR14(2)                                        --------->ANAC55(2)    <---------MYB52(1)                                        --------->ANAC58 --------->GLK1(1)                                        --------->ANAC46 <---------GLK1(1)                      <---------At4g35610                --------->CCA1(2)                        ---                      ----------->RAV1(2)   <---------DOF5.7(2)--------->DOF5.7(2)      --------->ANAC58            --------->HSFC1(2)          --------->ANAC58<---------ARR11(3)              --------->ANAC58            <---------HSFC1(2)         <---------TOE1(3)--------->ARR11(3)          <---------HSFB2a(2)            <---------HSFB2a(1)       <-----------GT1  <<<<<<<<<RAP2.2              <---------HSFC1(1)            --------->HSFB2a(1)     <-----------GT1<----------DOF2                  --------->HSFC1(1) ----------DOF2       --------->At4g35610 --------->DOF5.7(2) --------->At4g35610   --------->HSFB2a(2)   gtctttgacttagaaacttctatcacctgaatttgttttttcacgttatcgaactttagatatccgttgactcaccaaaatttcttccagaagcaaaatt  3813300                                                    --------->ANAC58                                                 <------NtERF2                                           --------->HSFB2a(2)                                           <---------HSFB2a(2)                                    ---                                     --------->ARR11(3)        <---------ZAT6                 ------>ZmHOX2a(2)                               <---------YAB1   --------->ANAC58                             <------ZmHOX2a(2)               <---------AHL20(2)    <---------ARR11(3)    --------->ARR11(3)               <--------               --------->AHL20(2)    <---------GLK1(2) ---------->DOF2                      <--------       ----------->GT1         <---------TOE2(3)--------->ANAC58                            ---------   --------->ZAT6        --------->ICU4    <---------LBD16--------->YAB1          <---------YAB1  <-- ------>TOE2(3)--------->AHL20(1)  ----------->ARR10--------->ANAC58      ---------->DOF2   ---------   tcttaaaactagaaaaataaaatggtcagtattaacatagattttctcggaggcaaacaaagatagtgttagagatgaaagagtatcaatgtaagatctt  3813400                                                                                -------->HAHB4                                                                                <---------ICU4                                                                                --------->YAB1  --------->GLK1(1)                                                            <---------ATHB51 ------>HSFB2a(2)      ---------->DOF2                                         <---------ATHB12 -ARR14(3)          --------->HSFB2a(2)                                      ------>MYB83 -ARR11(3)          --------->HSFC1(1)                                       ------>MYB46(1) >ARR14(3)          <---------HSFB2a(2)                     --------->ARR11(3) --------->ICU4 -------HSFB2a(2)--------->ZAT6    ----------->GT1    --------->YAB1       <---------MYB59<---------- >ARR11(3)--------->ICU4          <------------AtMYB77--------->ATHB12     --------->TOE2(3)    <----   acagaaatcgaaatgactacctctagaaagttagaaactgtcaatactagtccgaatgataagagctagatttgaaacctaataatgagtttttccgata  3813500  Previous    Next  AGI:  At5g11830.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G26090.1); contains InterPro domain Plant self-incompatibility S1 (InterPro:IPR010264) Range:  from: 3812521    to: 3813045    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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