Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                               <-------                                                                                            <--------                                                                                            <--------         --------->MYB52(1)                                                            --------->MYB52(1)        *TSS                                                                          -------->HAHB4        ------->GAMYB                                                             --------->AHL20(2)       --------->MYB46(3)                                                         <---------AHL20(2)       <---------MYB52(2)                                                         --------->AHL20(1)    <---------WRKY45                                        <-----------GT1      --------->AHL20(2)    <---------WRKY38(1)                             --------->ZAT14 --------->ARR14(2)--------->ATHB51    <---------WRKY12                                <---------ZAT14 <---------ARR14(2)<---------ICU4   --------->WRKY18(1)                         --------->ZAT14     <---------CCA1(2) --------->ICU4   <<<<<<<<<<WRKY11                            <---------ZAT14--------->ANAC46<---------YAB1---------   <<<<<<<<<<WRKY6                    <-----------GT1 ------------>CBF       --------->AHL20(2)    -- -MYB46(3)                       ----------->TBP  --------------->AtSPL8     <---------AHL20(2)   <--   caatggtcaacaaacagtccatacataggctctctacatataacaagactatactgtacaatttacgacatatctgtattaaaattaattatcggatttt  3808300        <-----------RAV1(1)       <---------TOE2(3)                               --------->ALFIN1     <---------AHL20(2)                               ------->MYC3 <----------DOF2                             <---------ALFIN1 --RVE1(1)                               --------->ZAT18 -ARR14(2)                               <---------ZAT18           --------->ATHB12 -GLK1(2)                                --------->ZAT14         <---------TOE2(3)            <------ >ARR14(2) <---------ANAC46              <---------ZAT14----------->GT1             <---------ANAC58 -------->ID1         <----------DOF2   ------->GAMYB <-------MYC3<---------YAB1    <---------ANAC58 ---------GT1<-----------RAV1(1)      --------->At4g35610 <--------P             <----------DOF2   tttctttttaatgttgtgttgtttctttgtaatatacagcaactgcaccatgtccatgtggtagattaatgaatggaatgggtctttcttggttatttga  3808400                                                                   <-----------GT1                                                                <---------ICU4                                                                --------->YAB1                                                               --------->ICU4                      <-                                                               <---------YAB1                  <-----                                                         --------->ICU4                        <-----                                                     ------>NtERF2<---------YAB1               ------                                        <---------At4g35610  <---------ICU4                   <------                <---------ARR11(3)      --------->At4g35610 --------->ICU4                    <------        <------ZmHOX2a(1)   <---------HSFB2a(2)     --------->ANAC58                          -------       <----------ID1       --------->HSFB2a(2)     --------->ANAC58                     --------->ANAC55(2) ---AHL20(2)    --------->ARR11(3)  <----------DOF2 --------->ANAC46              <----------DOF2  --   ttttcgattaggacaaaacatcttccatttctataaaactttagctcaatgtctacgccatacttattattactcaatgcgactctttttcatgtaatca  3808500 --------AHL20(2) ---HAHB4 ----ICU4--------->YAB1 --->ATHB12          <-----------GT1 ---YAB1 --------->AHL20(2)           ----------->GT1 ---ATHB12--------->AHL20(2)    <---------YAB1 -->ICU4<---------ATHB12      --------->YAB1          <-------MYC3               --------->YAB1     < ------->AHL20(2) <---------GLK1(1)   <---------ANAC46------->MYC3       --------->PCF5     ---------   tttaaatccaataaaaatagatttcactgtatttataattctgtgaaatttgtaaacgtgtttttttagttcatggtccccaaaaattatccaaaaaatc  3808600                                                           --------->AHL20(1)                                                      --------->AHL20(2)                                                      <---------AHL20(2)                                                      ----------->TBP                                                    ----------->TBP                                                    <---------AHL20(2)                                                  --------->AHL20(2)                                                  ----------->TBP                                                  <---------AHL20(2)                                                <---------AHL20(2)                                                --------->AHL20(2)                                                ----------->TBP                                              --------->AHL20(2)                                              <---------AHL20(2)                                              ----------->TBP          --------->ANAC58      <-------                                      --------->AHL20(1)   <---------ARR11(3)          <---------ARR11(3)                                      <---------AHL20(1)  ----------->TBP             <---------AHL20(2)              <---------AHL20(2)      <---------AHL20(2)  <---------AHL20(2)        --------->AHL20(2)              --------->AHL20(2)      --------->AHL20(2)<-----------TBP--------->ANAC46--------->AHL20(1)          <---------AHL20(2)         --------->YAB1 --------->AHL20(2) --------->ANAC58--------->ARR11(3)      --------->AHL20(2)             <---------AHL20(2) --------->AHL20(2)         --------->AHL20(1)      --------->YAB1                 --------->AHL20(2) <---------AHL20(2)         <---------AHL20(1)   --------->WOX13(1)        ----------->GT1----------->TBP--------->ARR11(3)   --------->AHL20(2) -----------HVH21          ---------->DOF2--------->AHL20(2)      --------->ANAC46--------->AHL20(2) ->DOF2   --------->AHL20(2) <----------ID1<---------AHL20(2) <-----------GT1 --------->AHL20(2)    <   gctgtcaattaaaaaattaaaaacaaaaaaaaagaaaaattatattatatatatatatatatatattcccctcacgacaaaaaaatatatatattcgctt  3808700                                                                      <---------LBD16                                                                      --------->SPL7                                                                     <<<<<<<<<SPL1                                                                     <<<<<<<<<SPL5                                                                     <<<<<<<<<SPL4                                                                  <---------------AtSPL8                                                              --------->YAB1                                                         <---------ZAT14                                                  --------->WOX13(1)<---------SPL7                                                 ---------->DOF2  <---------------AtSPL3               ------------>CBF                 <---------ATHB12 <------------------SPL14            --------->TOE1(1)             ------>NtERF2  <------ZmHOX2a(2)      <---------ANAC58           <---------HSFB2a(2)            <------NtERF2<---------At4g35610      <---------ANAC58           --------->HSFB2a(2)          <---------ANAC46 --------->ZAT14     <---------RAP2.6(2)   --     <-----------GT1                    <---------ANAC58<---------ARR11(3)  --------->ATERF1(1)   <-- -----------------ANAC81               <---------LBD16 --------->At4g35610  --------->RAP2.6(3)  <--- ---------MYB52(1)   *TSS<----------DOF2<---------ANAC58--------->ARR11(3) <---------ATERF1(1)   ----   ctgtttttttcttctcggacaattcgtcttttgacaacaatggcggacaaatcaagcagatcactgatattgtacggagacggcttggctcgatttgtcg  3808800             --------->MYB46(3)            ------>MYB83            ------>MYB46(1)                   <---------ANAC46 --------->LBD16                       <---------ANAC46 <-----------HVH21              --------->LBD16                          --------->LBD16 ---->ZmHOX2a(2)               <---------ANAC58                    ------->TEIL ----ZmHOX2a(2)            <---------ANAC58   <---------ANAC58   <---------ZAT18               ------ ------ARR14(2)            <---------ANAC58   <---------ANAC58---------->DOF2                  ------ ----->ARR14(2) <-------TEIL   <---------ANAC58              ------>ZmHOX2a(1)    <----------DOF2   atccgtcaaataccaacatccattctcttgcttccgtcgctacttgtggcttcttgagccttcctaatgcacctccaggtctctctttctctctccctcg  3808900                        <---------ANAC58                        <---------ANAC58                     <----------DOF2                    <---------ANAC58                    <---------ANAC58               ----------->GT1               <------MYB83         --------->AHL20(2)                                              <-----------GT1        <---------------AGL15                                    <---------TOE1(3)           <-------       <-----------------AGL3                                <---------DAG2          <---------GLK1(1) --->ANAC58    <------MYB46(1)                               <----------DOF2         --------->GLK1(1) --->ANAC58   --------->MYB59                    --------->YAB1  <---------TOE2(3) <------ZmHOX2a(1)-   ctatctcttcataaatttggttactttcgtttgattcgtcttgaatttcagtcaaaatcgctactttaagggttttcacttgttaggatttcttagtgtt  3809000                                        <---------AHL20(2)                                        --------->AHL20(2)                     --------->MYB52(1)                                    <----------DOF2                          <---------MYB59             <---------CCA1(2)      <---------DAG2                --------->ZAT14 --ZAT6 <-----------GT1<---------ARR14(2)                ------->TEIL        ------>ZmHOX2a(2) -------->YAB1         --------->ARR14(2)<---------AHL20(2)       <---------ZAT14               -----   gatcagaattgaaccatatcgtttggattcgattgtgacttttttaatagtccaatatgaaactccagtatacaattgatctaactggccaacttagagt  3809100                                                      <---------ZAT6              --------->WRKY38(1)              <------ZmHOX2a(2)        <-----------HVH21                     --------->ARR11(3)     <---------ANAC58                   --------->CCA1(2)     <---------ANAC58    <---------ANAC58     <---------ARR11(3)       <----------DOF2   --------->ZAT14       <---------ANAC58    <---------At4g35610      <---------ANAC58   <---------ZAT14<---------MYB59      <---------ARR11(3)             <---------ANAC58     ------>ZmHOX2a(2) ---->ARR11(3)--------->WRKY12         --------->ARR11(1)<-----------GT1 ----------->HVH21 <---------MYB59   tcttgttcagtgtcaattgacccaattgcttaagaaacaaagatttgagatcacttgtgttacattgcccttgctttgacattttgctattgatctaact  3809200  Previous    Next  AGI:  At5g11800.1    Description:  KEA6 (K+ efflux antiporter 6); potassium:hydrogen antiporter. similar to ATKEA4 (Arabidopsis thaliana K+ efflux antiporter 4), potassium:hydrogen antiporter [Arabidopsis thaliana] (TAIR:AT2G19600.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65376.1); contains InterPro domain Sodium/hydrogen exchanger; (InterPro:IPR006153) Range:  from: 3803337    to: 3808208    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g11810.1    Description:  similar to Os02g0135600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045818.1); similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ79019.1) Range:  from: 3808721    to: 3810749    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version