Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                             ------>ZmHOX2a(2)                                                                                           ==========   ------>ZmHOX2a(2)                                                                      <------ZmHOX2a(2)  <------ZmHOX2a(2)                                                                       =========== <---------ARR14(2)                                                                      <---------ARR14(2) --------->ARR14(2)                                                                      <---------AGP1 --------->ARR11(3)                    --------->ZAT18                                   <---------ARR11(3) <---------ARR11(3)                 <---------ANAC58                                     --------->AGP1 -------->GLK1(1)                   <---------ANAC46                                     --------->ARR11(3) ---------GLK1(1)                   <---------ANAC58            <---------YAB1           --------->ARR14(2) ---->DOF2   --------->YAB1  --------->YAB1           ---------->DOF2             <---------YAB1<----   agagatcccgttctatgagagttttcttgaatcatgttgagtgtccaatatttctctaaaggaagtcttatagtatgttctgtttttataagatctgtct  3786800                              --------->REM1(2)                              <---------ZAT14                              --------->ZAT14                           <---------ANAC55(1)              ----------->GT1                           <---------ANAC58             <---------YAB1                           <---------ANAC46           <--------ATHB1                           <---------ANAC58           --------->YAB1                           <---------AtLEC2          <---------YAB1                ------>ZmHOX2a(1)                    <---------ATHB12                             <-- ======================HOX2a_HOX2a          ------>ZmHOX2a(2)   --------->AHL20(2)                <-- ======================HOX2a_HOX2a    <----------DOF2--------->ICU4                      --------->YAB1 ------DOF2     ===================================HOX2a_HOX2a <---------AHL20(2)     <----------DOF2   ttcgaattgaaacttctcctctcccatttgcgtgtagtctctttgatctaatacaatgattctagttaaattagacaacactcagtttctttcatggtcg  3786900                                   <---------ICU4                                  <---------YAB1                                  --------->ICU4                           ----------->GT1                       ------>MYB46(1)                       ------>MYB83--------->ATHB12                     <---------MYB59----------------------->TaNAC69(2)                <------NtERF2     <---------YAB1 ----------------->AG                                          <-----------HVH21   --------->YAB1   ----------------->AGL1       --------->ANAC58            <---------YAB1         - -------DAG2       <-----------------AG <---------YAB1                  ----------->GT1           <-- --------DOF2      <-----------------AGL1        --------->ANAC58    <----------DOF2  <---------At4g35610   ctttttcattatcgacaaggttaccaaattggtatattgattacccttggcacataatttgatattagctccttttgttaatattgtcagcgagtttctc  3787000                                                                                                 ----                                                                                            ---------     ----------->HVH21                                                                      ---------   --------->CCA1(2)                                          --------->YAB1                <--------  --------->ARR14(2)                                         ========================================  <---------ARR14(2)                               --------->ATHB12                         ---------  --------->ARR11(1)                              <---------YAB1      ---------->DOF2       ---------  <---------ARR11(3)              ----------->RAV1(2)        <---------------AGL15         ----------  --------->ARR11(3)      <---------AHL20(2)      --------->ICU4---------->DOF2            ---------- ---------->ARR10  --------->GLK1(2)----------->HVH21     <---------AHL20(2)               <--------- -------At4g35610 <---------GLK1(2) ------>ZmHOX2a(1)<---------WOX13(1)                  <-----------GT1   agaagatatgacaaatactagaatctatttcattactcctgactcttgggtcttgattgtttaatcaaaagagaaagggtatgttttgatataaccataa  3787100 ------>DOF2 ------>AGL15 >TOE2(3) -------AGL15 ========MADS_MADS          ----------->GT1 >TOE1(3)              ---------->DOF2 >YAB1               <---------YAB1               <---------REM1(1)            ------------>CBF  ---- ------->AGL3      <---------ICU4           ------->TEIL        <-----------HVH21              ------ ------->AGL2      --------->YAB1      <------ZmHOX2a(1)--------->YAB1----------->GT1     <------ZmHOX2a(1) --------AGL3     --------->ICU4 ---------->DOF2 <---------TOE2(3)<-----------RAV1(2)  <---------LBD16   aaaggaagggtatgtatggaattatgaaagaagaaaaaagaggatgtatttgatgtaagcataaaacatcaggggtttatatgcaattaccaggaagaaa  3787200                                                                              <---------HSFB2a(2)  --        <---------ARR14(2)                                                    --------->HSFB2a(2) ---        --------->ARR14(2)           --------->ZAT18                         <---------LBD16  -------        --------->GLK1(2)            <---------ZAT18                ------>NtERF2    --------------->AGL15   ---------->DOF2             <------ZmHOX2a(1)                    --------->LBD16  <---------------AGL15 ------->GT1            <-----------TBP     <---------AHL20(2)     --------->ANAC46 <---------------- ---->DOF2  ------>ZmHOX2a(1)  *TSS  <---------ZAT14             <---------ATERF1(1)--------->TOE2(3)   agaaaaaaagaatccttcaacgagggttttgtaggagagttcacattttttttttttttgtctcagactccgccaattctctggaaacttaatttggata  3787300                                  --------->LBD16                                 <---------ANAC46 ------->TOE2(3)                <---------LBD16                       <---------ANAC58 -------->GT1                 ----------->HVH21          --------------->AtSPL3                    <- -->ARR11(3)                ------>ZmHOX2a(1)      <-------TEIL       <---------ANAC58 <-----------GT1 -AGL3                  --------->ARR14(2)    <---------ATHB12     <--------P    <------NtERF2   ----   ttgttaatttgttctcgcatagatcgattcctcttacggagaaatgcaatcgattcgtagcagtacaaggttgcttcagaggcatcgtttctccatctcc  3787400                                     <---------ZAT2                                     <---------At4g35610                                --------->HSFB2a(2)                                <---------HSFC1(1)                                <---------HSFB2a(2)                 <---------ARR14(2)                                --------->HSFC1(1)                  --------->ARR14(2)            ---                           <<<<<<<<<TBF1                           <------ZmHOX2a(1)             ----                          --------------->AGL15                   <------MYB46(1)            <-------                        <<<<<<<<<TBF1--------->ZAT2             <--------P                   --------           <-----------GT1<---------------AGL15               <------MYB46(1)                <-------       <------------------------ANAC81                        <------MYB83                   -------- --------ALFIN1      <<<<<<<<<TBF1   --------->At4g35610   <------ZmHOX2a(1) <----------DOF2<-------- ------->RAV1(1)  <<<<<<<<<TBF1<---------LBD16       ------->TEIL <------MYB83              ---------   aacactcttcgtttcacttcttcttcttcttcttctggaagctggtctgaaaatgaatcgaggatggtaggatttgattctttcccttgtaccagagctg  3787500   <---------ARR11(3)   --------->ARR11(3)  <---------CCA1(2) -------->RAV1(1) ------->HVH21                            <---------DEAR3(1) --At4g35610                          ------>ZmHOX2a(1)          <---------ANAC58 ->ZAT2                            <-----------GT1               <---------ANAC58 --ZAT2                            ---------->ID1             <----------DOF2                      <- ->At4g35610                      <-----------GT1       --------->ANAC46                           <- -ARR14(2)                  <---------DREB2C(2)         --------->ANAC58                           <- >ARR14(2)      <-------GAMYB<---------DEAR3(2)         --------->ANAC58<---------CCA1(2)          <-   cgacatatctcattagctcgttgaaaaatgtcggtttttcctcttcggcgatacctgtaagccactttcgttctctatcttggtttaagagtgtttttat  3787600                                <---------MYB52(1)                                <--------P                               <-------GAMYB                              <------MYB46(1)                            <-------TEIL                           <---------ARR14(2)<------ZmHOX2a(2)                          <---------SPL7     --------->CCA1(2)            ------>NtERF2                         <---------HSFC1(2) --------->ARR11(3)            >>>>>>>>>>>>>>>>>LFY                         --------->HSFC1(2) <---------ARR11(3)         <---------ZAT14                         --------->HSFB2a(1)--------->ARR14(2)         --------->ZAT14          --------->HSFB2a(2) <------MYB83 <---------GLK1(1)           --------->ZAT18          <---------HSFB2a(2)--------->MYB59--------->AGP1   <---------ANAC58                  <-----      <---------ANAC46   <---------HSFB2a(1)<---------ARR14(2)<----------DOF2              ---------- --------ANAC46         <---------------AtSPL3------>ZmHOX2a(2)        <---------ZAT18   --------->ANAC58 --------ANAC58        <------ZmHOX2a(1)   --------->GLK1(1) <---------ANAC58   --------->ZAT14<----- --------ANAC55(1)     ==============================HOX2a_HOX2a      --------->ALFIN1   --------->ANAC58 --------ANAC58        =============================HOX2a_HOX2a   ---------->DOF2    <---------AHL20(2)   ttcgtgtgatttgtagaaatgtagaggaggttcggttagtaatggagatctaatgtcaaacttgctttaaaagtgcagccagtgtaataaaacgaaagct  3787700  Previous    Next  AGI:  At5g11750.1    Description:  ribosomal protein L19 family protein. similar to ribosomal protein L19 family protein [Arabidopsis thaliana] (TAIR:AT4G11630.1); similar to putative L19 ribosomal protein [Solanum lycopersicum] (GB:ABC26877.1); contains InterPro domain Ribosomal protein L19; (InterPro:IPR001857) Range:  from: 3787231    to: 3789213    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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