Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                         ---------->DOF2                                       --------->At4g35610                                       ----                                       <---------At4g35610  ----------->GT1               --------->HSFB2a(2) --------->YAB1----------->GT1     --------->YAB1 <----------DOF2                         <---------HSFB2a(2) ---->GT1<-------TEIL   <------ZmHOX2a(1)   --------->ARR14(2)        <---------------AtSPL8    <----   ttatcaaaagtttcatatagataataggactatagaagcatagctgaatactcttttgaaagtggtttctaaattgtactgagcaaaatgttctaaaaac  3758500                        --------->ARR11(3)                       --------->ATHB12                       <---------ICU4                      <---------YAB1                      --------->ICU4                      <---------ATHB12            --------->TOE2(3)         --------->ANAC55(2)            --------->TOE1(3)        --------->MYB59        ------>ZmHOX2a(1)            <---------TOE2(3)                       --------->GLK1(2) ------->RAV1(1) <---------At4g35610 <---------TOE1(3)                      <---------GLK1(2)    ---- ------ID1  --------->YAB1     <---------------AGL15 <---------YAB1   --------->YAB1          <------   aacaaaactcctaatcttaagctaatgattttggcattttaggtaactacttgttataaatagctaaaacaataacaagaatctctaaaactcgtcttca  3758600                                                                   --------->AHL20(2)                                                                  <---------AHL20(2)                                                                  --------->AHL20(2)   ----------->GT1                                            --------->AHL20(2)            --------- ----->ANAC55(2) --------->At4g35610                   ----------->GT1--------->AHL20(2)  ---------->DOF2 ---REM1(2)   ---------->DOF2     --------->AtMYB61   <---------ARR11(3)     --------->AtMYB61   cgttttggttaaaatcgaaagctcaaacaatccaaaccaaaactaaaccgaaacaagatgtcaaaaaaataaataaacacctaaaccgaaaccaaagtta  3758700                                                                                                 ----                                                                                                -----                                                                                               <-----                <---------SPL7                                                    --------->ANAC58               ----------->HVH21                                                  --------->ANAC58    ------->GAMYB--------->MYB52(1)                                          --------->YAB1    <-----  --------->At4g35610                                       <------------AtMYB77<-----------GT1<----- --------->MYB52(1)       <----------DOF2   <---------ICU4  --------->ZAT6 <------------CBF   <------ -->GT1      --------->At4g35610      ----------->GT1  --------->YAB1   ------------>CBF   <---------   aaacaactgaaaatgggctgaacggtccctttaatctgagatgtaataaggcccaaatagtaactgtagatggggacaattgtaacgaaatcaaattgcg  3758800                                                                                   <---------HSFB2a(2)                                                                        <---------O2--------->LBD16                                                                        <---------ANAC58                                                                        <---------ANAC46                                                                        --------->O2----------->GT1                                                                     <------NtERF2 --------->HSFB2a(2) -->NtERF2                                                          <-----------HVH21 ---->LBD16                                                   <-----------GT1      <---------HSFC1(1) ----ANAC58                              ----------->GT1   *TSS    --------->O2   <---------LBD16 ----ANAC46                         <---------AHL20(2)     <---------KAN4(2)  <----------DOF2 ----ANAC58               <---------------AtSPL8          --------->YAB1<---------ANAC58         ---- ---LBD16          --------->ICU4   --------->AHL20(2)  <---------TOE2(3) <---------CCA1(2) <-------- ---CBF     ---------->DOF2 <----------ID1       ----------->GT1   --------->ANAC46--------->HSFC1(1)   ggcgaaaatcgaactaaagaaataagtagagggacgaataaaatggttagaaggttttaagaataaaccgcgtcgcgtctcttttctggaaaaaacgaga  3758900                                                                                      <---------HSFB2a(1)                     <-----------GT1                                                  --------->HSFB2a(1)                    <-----------GT1                                                  <---------KAN4(2)                --------->AHL20(2)                            ------>ZmHOX2a(1)  <---------TOE1(2)          ---------->ID1             <<<<<<<<<TBF1            <----------DOF2    --------->LBD16      ------>ZmHOX2a(2)        =============================HOX2a_HOX2a    <---------ETT(2)    --------->ARR11(3)     <---------ARR14(2)             <---------ARR11(3)     <---------TOE2(2)<--    <---------ARR11(3)     --------->ARR14(2)         --------->YAB1       --------->ETT(2)       <-- ----->GLK1(2)<----------DOF2  ------>ZmHOX2a(1)     <------ZmHOX2a(2)   --------->ZAT14        <---- --ID1================================HOX2a_HOX2a    ================HOX2a_HOX2a<-----------RAV1(2)   aactgtgatcttggcccttttattacccctatcctcttcttcttcaatctctccgatcaaaatccttttaagctctgtagacccaggtatgttccttcag  3759000                                  <---------ANAC46                                  <---------ANAC58                 <----------DOF2                  <                             ===============================HOX2a_HOX2a                   <---------GLK1(2)                             <------ZmHOX2a(1)                <---------At5g28300   --------->ARR11(3)                           <---------TOE2(3)                <---------MYB52(1)      <---------GLK1(2) --------DOF2            ---------->DOF2             <---------HSFB2a(1)            <---------ARR14(2) -------DAG2        <---------YAB1<---------ANAC58   --------->HSFB2a(1)         --------->YAB1   <-- -----At4g35610     <---------ANAC46                 ------>ZmHOX2a(2) <---------YAB1   <---------YAB1   cttttctattcgcgagaaaattacgagtaaaggattgcttgaaattgaacttggatcgttctgttactgctttcttattgctatcagattttgattctct  3759100                                                      ------>ZmHOX2a(1)                       <---------WOX13(1)      <---------YAB1                     --------->ATHB12        <--------HAHB4            <---------AHL20(2)          --------->ANAC58        <---------CCA1(1)               --------->ANAC58        <---------RVE1(1)               --------->ANAC46       --------->ARR11(3)               <---------ANAC55(2)       <---------ARR11(3)--------->ATHB12   <---------YAB1                      --------->HSFB2a(1) ------ZmHOX2a(1)   <---------YAB1      --------->ANAC55(1)                     <---------HSFB2a(1) -------TOE2(3)<----------DOF2          --------->ANAC55(2)<----------DOF2   <------ZmHOX2a(1)   ----   aaggaattagatattttctttgttgattgatttgttttgaacacgtattattaatcctagtctttgtttctacattataggaacgtttcgatttgaatta  3759200                                                                                                  ---                                                                                                  <--                                                                                                  ---                                                                                                  <--                                                                                               ------                                                                                               <-----                                                                                               <-----                                                                                              -------                                             <---------ZAT2                                   -------                                  <---------------AGL15                                 ----------->GT1             --------->AHL20(2)  <-----------------AGL3                                ------>ZmHOX2a(2)             <---------AHL20(2)  <-----------------AGL2                              <---------ARR14(2)             --------->AHL20(1)<---------ARR14(2)                                    <---------AGP1             <---------AHL20(1)--------->ARR14(2)            ----------->GT1    <---------ANAC46  ---            --------->AHL20(2)<---------GLK1(1)      --------->CCA1(2)          <---------ANAC58 <---      --------->TOE2(3)       <---------CCA1(2)   <---------YAB1   <---------WOX13(1)--------->ARR14(2)      --------->TOE1(3)     <---------AtLEC2 --------->At4g35610 --------->ATHB12   <---------CCA1(2) ----->At4g35610       <----------DOF2       <---------At4g35610<---------YAB1  <---------ANAC58 ----   gctaaaaacctcaattttatttgctcttttgcatatctgaaattggaagctgatgatatgtggatgttaattggctctagttacttggatctgtgaataa  3759300 ------>ATHB12 -------ICU4 ------>ATHB51 -------AHL20(2) --->YAB1 ----ICU4 ---HAHB4 -->ICU4 -->AHL20(2)                         <---------YAB1                                           <------ ------>AHL20(2)               --------->ARR11(3)                                          --------->ARR14(2) ------YAB1                    <---------ARR11(3)                         <---------YAB1   <---------ARR14(2) ----->ICU4            <----------DOF2  <---------WOX13(1) <---------GLK1(1)           <-----------RAV1(2)   ttatttgctaatttggagcatgttcctttgaattatcttctgattgtctaagtatatttggaaatgtgtttatattctcatttgtgtgatcaggttacgc  3759400  Previous    Next  AGI:  At5g11680.1    Description:  similar to hypothetical protein OsI_031621 [Oryza sativa (indica cultivar-group)] (GB:EAY77662.1) Range:  from: 3758859    to: 3760852    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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