Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                    <--                                                                                                  <--                                                                                                 ----                                                                                                 <---                                                                                                 ----                                                                                    <---------ANAC58                           <---------ZAT2                                           <---------ANAC58                           --------->At4g35610                                   <---------MYB52(1)                     <---------ANAC46            <------NtERF2              ------------>AtMYB77 <---                  ----------->TGA1              --------->MYB52(1)        <-----------HVH21--------->SPL7                  ----------->HVH21             ------>NtERF2            <---------MYB46(3)------->TEIL                 <-----------HVH21             <---------ALFIN1          <------MYB83   <---------ANAC58              <---------LBD16            <---------ARR14(2)              <------MYB46(1)--------->ANAC55(2)              ------>ZmHOX2a(2)          --------->ARR14(2)             <---------AtMYB61  <-------TEIL             <------ZmHOX2a(2)          ------>ZmHOX2a(1)              <---------MYB52(1)<---------SPL7             ==================================HOX2a_HOX2a            <-------GAMYB--------->MYB52(2)            <---------ARR14(2)      <---------ARR14(2)               <---------ANAC58   <---------ANAC58 -------->ALFIN1--------->At4g35610 --------->ARR14(2)               <---------ANAC58   <---------ANAC46 ------DEAR3(1) --------->LBD16   <---------HSFC1(2)                 <---------ANAC46   <---------ANAC55(2) -----ORA47(1)=================================HOX2a_HOX2a   --------->ANAC58   --------->At5g28300 -ZmHOX2a(1)--------->ARR14(2)    --------->HSFC1(2)         --------->ANAC58   <-------GAMYB<-------   cggtggagaagacggatccggtgacggagagctcgaagtatcctatctgccaccggttgagccaagaaatgccgttggtcacggttacttacgtacgggg  3740100                                                  <-------GAMYB                                                  <---------ZAT2                                                  --------->At4g35610                                                  <---------At4g35610                                                 <---------MYB46(3)                                                 --------->MYB55(2)             ----------->RAV1(1)               *TSS <<<<<<<<<<AtWER            ----------->HVH21                <---------RAP2.6(2)            <---------ETT(1)                 --------->ANAC58           --------->DEAR3(2)                <---------ANAC55(2)           ------>ZmHOX2a(2)                 --------->ANAC58          <------ZmHOX2a(2)                 --------->RAP2.6(3)         --------->ARR14(2)               <---------MYB52(1)                      <---------ZAT6     <---------WOX13(1)                  <-------GAMYB                          <---------ANAC58   --------->ATHB12                     <---------ANAC58                        <---------ANAC58  <---------AHL20(2)                    <---------ANAC58                   <---------ARR11(3)       - -------CCA1(1)                         --------->ANAC55(2)                --------->ARR11(3)       < -------RVE1(1)                         <---------ANAC55(2)               <---------AHL20(2)      <-- ----->ARR11(3)                      ------------>MYB.PH3(1)            <-----------TBP       <------ ------ARR11(3)           <---------ARR11(3)--------->SPL7            --------->CCA1(2)       ------- ----->ARR14(2)    --------->GLK1(2)<---------GLK1(1)                <---------ARR11(3)<---------ANAC55(2) ------ARR14(2)   <---------GLK1(2) --------->GLK1(1)                --------->ARR11(3)<---------ANAC46 --LBD16 <---------ARR14(2)<---------YAB1<-----------HVH21--------->GLK1(2)--------->AHL20(1) <------   atatttgattggatccgacagattccatgatttttgagaattccgttacggcagttggagaatttatgcgagatatatatattcgtgttaagtatatagg  3740200                                                                                          <---------GLK1(1)                                                                                 --------->TGA1a                                                                                 ====================                                                                                 --------->O2                                                                                 <---------ANAC58                                                                                 ====================                                                                          <---------At5g28300                                                                 --------->ALFIN1<---------O2                                                                <-------MYC2     <---------ANAC58                   --------->TGA2(2)                            ------->MYC2     <---------bZIP60(2)                  <-----------TGA1                              ------->MYC3     <---------ANAC46                  <-----------HVH21                             <-------MYC3     <---------TGA1a                 <---------O2                                   <-------MYC4    <------NtERF2                 --------->bZIP60(2)   --------->GLK1(2)        ------->MYC4   ------>NtERF2<------ZmHOX2a(2)                 --------->TGA1a      <---------ARR14(2)       --------->TGA1a<---------DEAR3(1)                 --------->ANAC55(2)  <---------GLK1(2)        <---------TGA1a----------->HVH21     <---------ANAC46 --------->ANAC55(2)     <---------AtLEC2 <---------O2 ===============MYC_MYB     <---------ANAC55(2)        <---------ZAT14                --------->O2 ------->GAMYB --------->GLK1(1)  <---------MYB52(1)  <---------ANAC55(2) --------------------->WRI1     --------->MYB52(1)--------->ARR11(3) ---------->GT1  --------->O2   --------->ZAT14                =====================MYC_MYB<---------ARR11(3) ---------ZAT6   --------->ANAC46    --------->HSFB2a(1)       ====================================== -----TEIL    <-------TEIL      <---------LBD16                <---------ANAC55(2)      <------ZmHOX2a(1) ---------AtSPL3 --------->ANAC58    --------->GLK1(1)         --------->ANAC55(2)  --------->REM1(2) -------->AtSPL3 --------->ANAC55(1)----------->ARR10         ------------>OsbHLH66--------->ALFIN1 ---------AtSPL8 --------->ANAC58 --------->LBD16            <---------ALFIN1 --------->DEAR3(1)-----   tacagttacttatacatacacgtcatgtaatctgtgcggagattctttgtatgaaacgttggcacacgtgtggaataacggcgacgtgtaggagatcaca  3740300           --------->ANAC58           --------->ANAC58           --------->ANAC55(1)          <---------LBD16        <---------REM1(2)                                                <----------DOF2      ----------->HVH21                                           <---------ANAC58     <-----------HVH21     <---------ANAC58                       <---------ANAC46   <---------------------WRI1                                   <-----------HVH21            --------   <------NtERF2    --------->DAG2                             --------->O2                  <------- <---------DEAR3(1)---------->DOF2                 <-----------GT1<---------ANAC58         <---------PCF2 ======bZIP_DOF <------MYB83                     <---------AHL20(2)   <---------AtMYB61 --------->ALFIN1 ======bZIP_DOF <------MYB46(1)           ----------->GT1      <---------O2       <---------YAB1<---- ======bZIP_DOF ----------->GT1           ------>ZmHOX2a(2)    --------->ANAC46   ----------->HVH21 ----->DOF2--------->ANAC46<---------ANAC58      --------->AHL20(2) <---------ANAC46  <-----------RAV1(1)   aagacggcgttacacggaaggtaaagtttacttggtttactggatcgaaaattaaacaattttagacgtcgtgtggtttttggtatgactgtgggacatc  3740400   <---------MYB52(1) <---------ANAC58 <---------ANAC58 <---------ANAC46  <---------DAG2     <------NtERF2 ->bZIP60(1)       <----------DOF2  <---------DEAR3(1)                        <---------ANAC58 --bZIP60(1) <------------CBF  <---------DOF5.7(2)                            <---------ANAC58 -----ICU4<-----------HVH21 --------->YAB1    ----------->GT1*TSS          <----------DOF2   --------   atgccgtttgtctgtcattgactttttgtttgataacgtcgtcgtttttggttaaacctcgaaaaacccctctctctctttcttgctcttgttaacctag  3740500                                                                                                    <                                                                                              ------>ZmHOX2a(2)               <-----------GT1                                                               --------           --------->ZAT2           ------>NtERF2                                            <------ZmHOX2a(2)           <---------ZAT2           --------->LBD16                                         <--------           --------->At4g35610     <---------ETT(1)                                         ---------     <---------ARR11(3)    <---------ANAC58                                                 ---------     <-----------ARR10     <---------ANAC58                  ------>ZmHOX2a(2)              ---------     --------->ARR11(3)    <---------ANAC46   <---------ANAC58           --------->TOE2(2)  <--------    <---------GLK1(2)   <---------MYB52(1)    <---------ANAC58<----------DOF2               <-------- --------->YAB1--------->REM1(1)   <---------LBD16         <---------ARR11(3)             ----------- ->TOE1(2) <---------At4g35610    <---------LBD16          --------->ARR11(3)        <---------ANAC46   aaatcaaaatctcagcttcaccattcgtttcgtttttccggcaaaatggcttcacgatgtcgatctttgtcaaaaccagcgttttctgcgtttagatctg  3740600                                                <------NtERF2                                               <---------SPL7      --------->ANAC46                         ------>NtERF2 ---------ATHB12                               <-----------HVH21 ->CCA1(2)                                    --------->DEAR3(1)                                   -- -ARR11(3)                          <---------ICU4         ----------->RAV1(2)                     <- >ARR14(2)                         <---------YAB1--------->SPL7              --------->MYB52(1)<----- >AGP1--------->ANAC58    --------->RAP2.6(3) <---------ANAC58   <---------GLK1(1)           -------- >ARR11(3)               <---------ARR14(2)   <---------ANAC58  <---------ARR14(2)           <------- -AGP1--------->ANAC58   --------->ARR14(2)<---------DEAR3(1)   <---------GLK1(2) --------->ARR14(2) -ARR14(2)          <-----------------AGL1<---------At4g35610   --------->ARR14(2)<---------ARR14(2) >ARR10            ---------->ID1--------->REM1(1)     ------>ZmHOX2a(1)----------->GT1      <-------   caatgaacaagccatctattcgtcccaaatcggcttcatcattcatcggcgtccctccttcgcctggattttcgaggtaaaacggatttgagttggattc  3740700                                                                    <---------ZAT2                                                                    --------->At4g35610                                                                    <---------At4g35610    <---------MYB52(1)                                              ----------->RAV1(2)  <---------ANAC58                                                <-----------RAV1(2)  <---------ANAC58                                                <---------WRKY12          >>>>>>>>> ------->ARR14(2)                                                 <---------WRKY38(1)     <---------ANAC58 --------ARR14(2)         --------->YAB1                        <-----------HVH21         <---------ANAC58 --TEIL           <---------TOE2(3)                            <------MYB46(1)            <---------ANAC46 ->ARR14(2)    <---------WOX13(1)                              <------MYB83<-------TEIL<---------MYB52(1) --ARR14(2)  --------->ATHB12                               <---------MYB52(1)       <---------ICU4 < --GLK1(2) --------->HSFB2a(2)---------->DOF2     ----------->HVH21 --------->ZAT2  <---------ATHB12-   gtattcgtgagttctcgattgatgtaattcataaaaggttttgtttttggatttgacaggccgattggtcagctgggttcgcttcaatcgttgcttccat  3740800            <---------ANAC58           <------NtERF2          ------>NtERF2          <---------MYB46(3)          --------->ABI4(2)         <---------DEAR3(1)       <---------ANAC46       <---------ANAC58       <---------ANAC58       <---------bZIP60(2)      <---------DEAR3(1)     --------->ZAT14               <---------ANAC46                                              ----     --------->ZAT18              <---------ANAC58                                              <----     <---------ZAT18              <---------ANAC58                                              <----     <---------ZAT14          <---------ANAC58                                      <---------ZAT14    --------->ALFIN1   <---------WOX13(1)                                           --------->ZAT14<- >>>>>>>>LFY<---------ANAC58  <---------ANAC58                      <---------At4g35610      -------- ---------ZAT14  --------->At4g35610                  --------->GLK1(1)<-----------RAV1(2)   <------- -------->ZAT14  <---------At4g35610              --------->ANAC46  --------->At4g35610      --------   tgtacagtgcggtggcttcagctagattgacttcgtgcctgggtatcgattcacagaattctaggtcattagctcagggtatgctctgcagtgcgaatcc  3740900                                                 <---------DAG2                                           --------->ANAC58                                           --------->ANAC46                    <---------CCA1(2) ----->LBD16                        <---------ARR14(2)                       <---------AtLEC2 -------RAV1(2)                     <---------ARR11(3)                   <----------DOF2 -----LBD16                         --------->ARR11(3)                  ------>ZmHOX2a(2) -----ZmHOX2a(1)                    --------->ARR14(2)                  <---------ICU4 ->ARR14(2)                        <---------CCA1(2)                  --------->ARR11(3)     <------- --ARR14(2)                    <---------ANAC46  <----------DOF2      <---------ARR11(3)     <------- ->GLK1(2)              <---------ANAC46   --------->ANAC58       <----------DOF2            <-------   aggagtttgatattcttccaaatgttttgtgtttagtatatctgtaagcaacttttttttttaaaactctttgatctttgcatagcttcgaacttgcatg  3741000  Previous    Next  AGI:  At5g11620.1    Description:  SWIM zinc finger family protein / mitogen-activated protein kinase kinase kinase (MAPKKK)-related. similar to unnamed protein product [Vitis vinifera] (GB:CAO44015.1); contains InterPro domain Zinc finger, SWIM-type; (InterPro:IPR007527); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) Range:  from: 3739014    to: 3740147    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g11630.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G17310.1); similar to unknown [Populus trichocarpa] (GB:ABK94391.1) Range:  from: 3740461    to: 3742140    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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