Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                         <---------MYB52(2)                       <---------HSFC1(2)                       --------->HSFB2a(1)                       <---------HSFB2a(1)                              --------->ATHB12                       --------->HSFC1(2)                              <---------YAB1                   <---------MYB46(3) --------->ANAC46                <---------ARR11(1)                  --------->ALFIN1    --------->ANAC58               <---------CCA1(2)                --------->LBD16 <---------At4g35610         <---------DAG2               <---------DEAR3(1)     --------->ANAC58      <----------DOF2         <---------------AGL15  <-----------GT1<---------MYB52(1)<-------TEIL          <---------ALFIN1           --------------->AGL15 ---AGP1      <---------LBD16   --------->At4g35610     <---------At4g35610   <---------GLK1(2)     <   tgttatacggtttaagcccggtggatgcttcttgagatgcaagaaacgtttcattttcagcacttttagtcgtatcattggattttctgaattcagaaat  3737800                                                                            -------->P                                                                           ------->GAMYB                                                                          <---------MYB111(1)                                                                          --------->MYB46(3)                                                                          <---------MYB55(2)                                                                          <---------MYB111(2)                                                                          <---------MYB52(2)         --------->LBD16                                                ----------->RAV1(1)        <---------HSFB2a(2)                                          --------->ANAC58        <-----------RAV1(2)              --------->At4g35610         --------->ANAC58 ---------ZAT18                          <---------At4g35610----------->HVH21 --------->YAB1   agtgctgtttccaggtgaaacaatagatagtagtactggagagagctcaaaatactgaaggcctgaaacgaaggcaacaaccagaaccatgagaagaaca  3737900                                                                                --------->GLK1(1)                                                                                <---------GLK1(1)                                                                          --------->TOE1(3)                                                                    --------->ATHB51                                                                    <---------ICU4                                                                    -------->ATHB1                                                                   <---------ATHB51                       ---------->DOF2                  --------->TOE1(2) --------->TOE2(3)                  <---------ANAC46                --------->YAB1   --------->ICU4                  --             <---------O2               <----------DOF2 <---------LBD16<-----------GT1            <--             --------->O2   --------->LBD16    --------->WOX13(1)  --------->AHL20(2)       ---------       --------->GLK1(1)   --------->RAP2.6(2)------>ZmHOX2a(2)    <---------AHL20(2)       <--------   actctacaggtttccacttggcctataaaccgcaaaacccgactttgatccatcaaaacctggaaacaaattattaccttagatttccagtgatataaat  3738000                                                                 <---------ANAC58                                                                 <---------ANAC58                                                               <---------ARR11(3)                                                               --------->ARR11(3)                                                           <--------P                                                         <---------ANAC55(2)                                                       <-----------RAV1(2)                                                    --------->GLK1(1)           <-------GAMYB ----->TEIL                                         --------->CCA1(2)          <---------MYB46(3) -------CCA1(2)        <---------HSFB2a(2)          <---------GLK1(1)          --------->MYB52(2) >AHL20(2) ------>ZmHOX2a(1)                       --------->ARR11(3)      <---------YAB1 -AHL20(2) --------->LBD16      --------->ARR11(3) <---------ARR11(3) <---------At4g35610       <----   gtatctcttcttcctgaaataagttgcagaaacagaacttgatcacttacagagatatcaggtaagagcttgagatgatgtttgttgatatatagaactg  3738100                                                              <---------ICU4                                                             --------->AHL20(2)                                                             --------->ICU4       --------->ANAC58                                                             <---------AHL20(2)   --------->ANAC58                                      <-----------RAV1(2)    <---------ATHB12 --------->CCA1(2) <---------ARR14(2)                --------->YAB1   <-------TEIL         ---------->DOF2 --------->ARR14(2)               --------->ICU4   --------->CCA1(2)  --------->ANAC58 ------->TEIL           <---------ANAC58          <---------ARR14(2)  --------->ANAC46 --------->GLK1(2)      <---------ANAC58      <------ZmHOX2a(1)   --------->MYB52(1)   --------->ANAC58 <-----------ARR10      <---------ANAC46 <------ZmHOX2a(1)   <---------ATHB51<----------ID1  <------- -------HVH21 <----------DOF2     <---------YAB1  --------->ARR14(2)  --------->ANAC58 --------->ANAC58   tcgaatctgagcgtttctttgaagttacttggagtgatcatcaggagaggaagattcagacaaataattaacaggcaaagagacaagacaaggcaatcga  3738200                                                                                             <-------                                                  <---------RVE1(1)                          <-------                   ---------->DOF2                <---------CCA1(1)                       <----------                  --------->YAB1                 <---------ARR11(3)                    <---------ICU4                  *TSS                 ------->TEIL                                 --------->YAB1   --------->AHL20(2)               <---------ANAC55(2)               --------->ANAC58 --------->YAB1 <----------DOF2 <---------ATHB12   --------->ANAC55(2)   <------------CBF         <---------YAB1 --ATHB12      --------->WOX13(1)--------->ICU4  --------->ARR11(3)   --------->ANAC58<---------YAB1   tggctttaaattttgttcaatcaaagtcttgactaattatgtatttttgtagatattttgtattggactgataagccaacaaggtatgataataactttt  3738300                                           --------->YAB1                                           <---------ICU4                --------->ANAC58          --------->ICU4                --------->ANAC58          <---------ATHB51                                          <             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                <-- --DAG2--------->YAB1                     <---------ATHB12             --------->At4g35610   ------>ZmHOX2a(1) ---DOF2 --------->At4g35610   <---------YAB1                 <---------AHL20(2)         <-----------GT1 -GT1 <---------YAB1<---------MYB52(1)  --------->WOX13(1)    --------->AHL20(2) <---------MYB52(1) <   ctcaaattatcagaagacaccccttaattatctatgtttgatcaattatgacccatagttttatttttttaagagcagcctctgttttttttttcctact  3738400                                                                                --------->YAB1                                                                                xxxxxxxxxxxxxxxxxxxxx                                                                           --------->HSFB2a(2)                                              --------->AHL20(1)          <---------LBD16                                              <---------AHL20(1)        --------->GLK1(2)                        --------->TOE1(2)    <---------AHL20(2)         <---------ARR14(2)                        --------->TOE2(2)  --------->AHL20(2)           --------->ARR14(2)                      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)            --------->HSFC1(2)                   --------->AtMYB61   <---------AHL20(2)             <---------HSFC1(2)                   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(l2)               <---------HSFB2a(1)                 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                --------->HSFB2a(1)                <-----------GT1     --------->YAB1                   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)              <---------AHL20(2)   <---------YAB1                 xxxxxxxxxxxxxxxx>smallRNA(i)              --------->AHL20(2)<xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)             <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                 xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                 xxxxxxxxxxxxxxxx>smallRNA(i)          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)<---------GLK1(2)        ----------->RAV1(1)   ------->TEIL<---------AHL20(1)    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)       <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)--------->AHL20(1)   xxxxxxxxxxxxxxxx>smallRNA(i)  <-------   <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)--------->YAB1         xxxxxxxxxxxxxxxx>smallRNA(i)  --------- <---------YAB1 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)        <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) --------->AHL20(2)  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) ---------AHL20(2) xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)  --------->GLK1(1)<---------HSFB2a(2) -------YAB1xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(l2)          --------->At4g35610  <------ZmHOX2a(2) ---------AHL20(1)<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)--------   attatttttgcaacatttaaaccatacctatgaacctataataatatatatattaagagcatctccatcgggagtttctggatcagaatgtctattaaaa  3738500                                                                                               xxxxxx                                                                                              <------MYB83                                                                                              <------MYB46(1)                                                                                              -------                                                                                          --------->ATHB12                    --------->ALFIN1                                                     <---------YAB1      <---------AHL20(2)                                                         xxxxxxxxxxxxxxxxxxxx   --------->AHL20(2)        ----------->GT1                                   <xxxxxxxxxxxxxxxxxxxxx x>smallRNA(si3) --------->DAG2                                             <----------DOF2   <------ --AHL20(2)     --------->DAG2             --------------->AGL15           <---------ANAC58 <-------- >YAB1--------->AHL20(2)    <xxxxxxxxxxxxxxxxsmallRNA(s)  ---------->DOF2  <---------ANAC58xxxxxxxxxx ->AHL20(2)    ---------->DOF2             <---------------AGL15         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)   cagaataaaaaattcgaaaaaggtggagagagagtaaaaacgtttctcatttgagaaactcaaagaaacctatttttgcttttgttttgttttgattggt  3738600                         <---------AHL20(2)             --------->AHL20(2)             <---------AHL20(2)             --------->AHL20(1)           --------->AHL20(2)         --------->YAB1  --------->AHL20(2)      --------->YAB1     --------->AHL20(1)    --------->AHL20(2)   <---------AHL20(1)    --------->AHL20(1)--------->YAB1 <---------AHL20(2)   --------->YAB1 <---------AHL20(2)<---------AHL20(1)                      <xxxxxxxxxxxxxxxxsmallRNA(s) --------->AHL20(2)  <---------AHL20(2)   <---------AHL20(2)    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) xxxxxxxxxxxxxxxxx>smallRNA(le3) --------->YAB1               <---------ANAC58           --------->MYB46(3) ---->GT1--------->AHL20(2)     --------->ICU4                <---------ANAC58         <-----------GT1 xx>smallRNA(si3)<---------AHL20(2) --------->AHL20(2)  <---------AHL20(2)  xxxxxxxxxxxxxxxx>smallRNA(i) xxsmallRNA(se3) --------->AHL20(2) <---------AHL20(2) --------->AHL20(2)  <xxxxxxxxxxxxxxxxsmallRNA(i) ---MYB46(3)--------->AHL20(2)  <---------YAB1     <---------AHL20(2)     <xxxxxxxxxxxxxxxxsmallRNA(s) -WOX13(1)  <---------AHL20(2)--------->YAB1    <---------AHL20(2)       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2) xxxxxxxxxxxxx>smallRNA(se3)--------->AHL20(2)<---------AHL20(2)<---------GLK1(1)    xxxxxxxxxxxxxxxx   tcaaaaaataataaaaaaattaaataataaaataataataaaatttatattattttataaaattgggtttctcaccgatggagatggtctaaccactctg  3738700  Previous    Next  AGI:  At5g11610.1    Description:  exostosin family protein. similar to exostosin family protein [Arabidopsis thaliana] (TAIR:AT5G25820.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44025.1); contains InterPro domain Exostosin-like; (InterPro:IPR004263) Range:  from: 3735441    to: 3738218    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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