Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                  --------->ANAC55(2)                                                                           <----------DOF2                                                                          ------>ZmHOX2a(2)                                                                         <---------RVE1(1)                                                                        --------->AGP1                                                                        <---------ARR11(3)     --------->ANAC58                                     ----------->GT1<------ZmHOX2a(2)     --------->ANAC46               --------->GLK1(2)   ---------->DOF2 --------->ARR11(3)     --------->ANAC58           --------->YAB1    ===============================HOX2a_HOX2a ----------HVH21               --------->AHL20(2) ==============================HOX2a_HOX2a    <----- --->ZmHOX2a(1)            <---------AHL20(2)     ------>ZmHOX2a(1)    --------->GLK1(1)       ------ --ALFIN1                  --------->AHL20(2)<----------DOF2          ----------->ARR10   ---------->ID1   ctatcacacacaaaaacgtctaatacgatttaaataaaaatcgggttctttcctaatataaagaaaaacactgagatcttttacttaatcttgttgttta  3695500     <---------ARR14(2)     --------->ARR14(2)                                                              <----------DOF2  <---------HSFB2a(2)   <---------At4g35610                                       ---------->ID1  --------->HSFB2a(2)   <---------ZAT2                --------->TOE2(3)          <-----------GT1   >> <---------LBD16   --------->ANAC58                <----------DOF2             <-----------GT1    --- ----AHL20(2)      --------->ANAC46            <---------GLK1(1)          <---------AHL20(2)   <----- --->AHL20(2)      --------->ANAC58            --------->GLK1(1)         --------->AHL20(2) <--------   atttctggatactgttcccctaagccagctattttctactaatgctcagatttctttcttaactaaacatatgcataaaattttctccttttattcactt  3695600                                                                                          <---------ANAC58                                                     --------->REM1(2)                    <---------ANAC55(1)                                                   --------------->AtSPL8          <----------DOF2                                                   <---------------AtSPL8    --------->ANAC46                                                  <---------ANAC58           --------->ANAC58                                                  <---------ANAC46           --------->ANAC58                                                  <---------ANAC55(2)        --------->ANAC55(2)                                                  <---------ANAC55(1)        ----------->GT1                                                  --------->ANAC55(2)        <---------ANAC55(2)                                                  <---------ANAC58           --------->ANAC55(1)                                                 <-------TEIL               <-------TEIL  <---------ANAC58      <-------TEIL                              --------->CCA1(2)          --------->ARR14(1)     --------->CCA1(2)           --------------->AtSPL8 --------->ANAC46   --------->CCA1(2)    --------->ARR14(2)     <-------TEIL        --------->ARR14(2)         --------->ARR11(1)    <---------ARR14(2)   --------->ARR14(2)    --------->ARR11(1)         --------->ARR14(2) >>>>>>>WRKY18           <---------ARR14(2)    <---------ARR14(2)         <---------ARR14(2) -------->HVH21 ---------->DOF2  --------------->AtSPL3--------->ZAT18  <---------------AtSPL8 -----DOF2    <-------TEIL--------->CCA1(2)    <---------GLK1(2) ----------->GT1   ================== ---GT1      --------->CCA1(2)   <---------------AtSPL8<---------ZAT14---------->DOF2     <---------ANAC46   ttgacagatacagagatacaaagaacagatacagagatgtacaaatacagatacgtgtacacaatagaagtaaaaagatacgtaactttgtttcgtgtaa  3695700                                                                                      --------->AHL20(2)                                                                                      <---------AHL20(2)                                                                                   --------->AHL20(1)                                                                                   <---------AHL20(1)                                                                               <---------YAB1                                                                              ------------>CBF                                                                             --------->YAB1                                                                             <-----------GT1                                                                          --------->ATHB51                                                                          -------->ATHB1                                                                          <---------ICU4                                                                         --------->ICU4                                                                         <---------AHL20(2)                                                                         --------->AHL20(1)                       <---------O2                                      <---------YAB1--------->AHL20(2)                       <---------TGA1a                                --------->AHL20(2)         <---                       <---------bZIP60(2)                            <---------AHL20(2)   <---------AHL20(2)                       =============================================bZIP_DOF<---------YAB1 --------->AHL20(2)                    ----------->HVH21                                --------->AHL20(2)<---------AHL20(2)                  ----------->GT1                             <---------AHL20(2)   --------->AHL20(2)             <-----------RAV1(2)                              --------->AHL20(2)   <---------AHL20(2) ================================bZIP_DOF                <----------DOF2 --------->AHL20(2)--------->YAB1   ttggaaataggcagaccagatggtgacatggcattgtcatgttccatagatgagttgttctttttttaatataaaattattacaataaattaataaaaag  3695800             --------->AHL20(2)     <------------CBF              --------->ANAC58                            <---------ALFIN1   --------->AHL20(1)              --------->ANAC58                        --------->At4g35610   <---------AHL20(1)            ---------->DOF2                           --------->GLK1(1) ------>ZmHOX2a(1)   <---------AHL20(2)         --------->ANAC58                    --------->YAB1  <---------DAG2   --------->AHL20(2)         --------->ANAC58                  <---------TOE2(3) <----------DOF2 ------GLK1(2)                --------->ANAC46                 *TSS        <---------At4g35610    <--   attattttattgaaattaaaacccttatatcgacgcaaagccaaacaaaaaaaaaaccctcatttcaaggataagagagctccactttctctctcctctc  3695900                                                                                          <---------ARR14(2)                                                                                          --------->ARR14(2)                                                                                         <---------HSFB2a(1)                                                                                         <---------HSFC1(2)                                                                                    <---------HSFC1(1)                                                                                    <---------HSFB2a(2)                              <------ZmHOX2a(1)                           --------------------->WRI1                      --------->ANAC46                                <---------ANAC58   --------->HSFC1(2)                      --------->ANAC58            <----------DOF2     <---------ANAC58   --------->HSFB2a(1)        ------->GAMYB --------->ANAC58   --------->DAG2            <----------DOF2  --------->HSFC1(1)     ----------->RAV1(1)     ----------->GT1     <---------DAG2   <---------DAG2    --------->HSFB2a(2) --------DOF2      <---------REM1(2)    ---------->DOF2      <---------ALFIN1   <---------GLK1(1)   ctttctccaacagtctctctctacaagccataggaaaaaaaaaaaagtccccctttctctctccctcccctttcgtcttagggtttctcgaaaattcgca  3696000                              --------->TOE2(3)                       --------->ARR14(2)                       --------->GLK1(2)                       <---------ARR14(2)                     <----------DOF2                       ------->TEIL                          <---------ANAC58                     <--                  ------>NtERF2                              <---------ANAC58                     ---                 --------->LBD16                         --------->LBD16                          ---            <---------At4g35610  ---------->DOF2        --------->ANAC46                <-----------GT1            --------->At4g35610------>ZmHOX2a(1)       <---------LBD16                 <-----------GT1   gtcaaattctactcatctcccgacgaatccatccttcaagctcatctaatcttcttctccgtagctttctcaatctaccgatatagtttttatcccttgc  3696100                                                                    <---------MYB52(1)                                                                   <-------GAMYB                                                                  <---------ANAC46                    --------->ANAC46                              <---------ANAC58                ------->TEIL                                     <-------TEIL                --------->GLK1(2)                              ------->PIF5--------->ANAC46                --------->ARR14(2)                             <-------PIF5<---------ETT(1)                <---------ARR14(2)                            =============MYC_MYB               <---------GLK1(2)                              =======================================          <---------ZAT2     ===========================================bZIP_DOF          --------->ZAT2     <----------DOF2                  --------->ZAT2      <------ZmHOX2a(2) ================================================MYC_MYB     --------->ARR11(3) -------->P                            <---------ZAT2             --------->At4g35610 -------At4g35610   --------->ANAC58                          --------->TGA1a            <---------At4g35610 ------>At4g35610   --------->ANAC58              --------->ETT(1)<---------ANAC58     <-----------RAV1(2) --->NtERF2    <---------CCA1(2)     --------->TOE2(3)      <-----------RAV1(2)    ------->TEIL   cgcttaagatcgagctcgaatctcgcaaccccttttaatccctaatttctggtcggattaacccaggtgcgttgtttccgacatgaatctcagatgtgtt  3696200                                         --------->CCA1(2)       <---------ANAC46                                      ----------->ARR10  <---------At4g35610                                 <------MYB46(1)     <---------REM1(1)                                 <------MYB83      <---------ANAC58                 <---------TOE2(3)    <---------TOE2(3)  --------->At4g35610             <---------At4g35610 <---------ANAC46  <---------ANAC46             --------->At4g35610<---------MYB46(3) <---------ANAC58     <---------TOE2(3)    ------>ZmHOX2a(2) <------MYB46(1)      <---------ANAC58     <---------TOE1(3)  <---------ARR11(3)  <------MYB83 --------->ZAT2<----------DOF2 <----------DOF2 <---------TOE1(3)<-------GAMYB ----------->HVH21<---------ANAC58 ===========bZIP_DOF    --------->ARR11(3) --------->MYB59 ----------->HVH21<---------TOE1(3)       <   tcgatttaaggtttgagctaaggtttgatcttgttgggttgagatttggtctgacttgtagctgacttcgtgtcttttaagcttcactgttcatttatac  3696300                                                                                            <--------                                                                                           <---------AGP1                                                                                           --------->AGP1                                                                                           <---------ARR14(2)                                                                                           <---------ARR11(3)                                                                                           --------->ARR11(3)                                                                                  --------->ALFIN1                                                                                 <-------MYC3                                                                                 ------->PIF4                                                                                 ------->MYC2                                                                                 <-------PIF4                                                                                 <-------PIF5                                                                                 ------->PIF5                                                                                 <-------MYC2                                                                                 ------->MYC3                                                                                 ------->MYC4 -------                                                                                 <-------MYC4------>ZmHOX2a(2)                                                                     --------->ANAC58      --------->ARR14(2)                                                                     --------->ANAC46  <---------ARR14(2)                                                                     --------->ANAC58  --------->ARR14(2)                                                                    <---------LBD16 <---------ANAC46                                         <------------------------ANAC81        <---------ANAC58                                     <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)         --------->TGA1a                                    <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)          <---------ANAC58                                    <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)         --------->O2<------ZmHOX2a(2)            <---------ARR14(2)     <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)--------->ANAC55(2) ----------->ARR10            --------->ARR14(2)     <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)          --------->ANAC55(2)        ------>ZmHOX2a(1)         <------------------------ANAC81 <---------REM1(2)<---------LBD16 <-        <---------LBD16        <---------DAG2                <---------ANAC58   <---------TGA1a    --        --------->LBD16        <----------DOF2               <---------ANAC46   <---------O2--------- ---------CCA1(2)           <-----------GT1                  <---------ANAC58  ------------>OsbHLH66-   gtctatcttcctcggaaactcttgatgttcttactttttttttttttttttttttttggggtttcgtcttcacggactattcacgtgcggatagatctga  3696400  Previous    Next  AGI:  At5g11530.1    Description:  EMF1 (EMBRYONIC FLOWER 1). similar to unnamed protein product [Vitis vinifera] (GB:CAO44052.1) Range:  from: 3695863    to: 3701549    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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