Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                       <---------ANAC58                                     <---------ANAC46                                     <---------ANAC58                              <------MYB83                              <------MYB46(1)                             --------->MYB59                          --------->ARR14(2)                                    --------->ZAT14                          <---------ARR14(2)                                    <---------REM1(2)                      <-----------------AG                                  ------>ZmHOX2a(2)                      <-----------------AGL3                               --------->GLK1(1)                      ----------------->AGL1                               <---------GLK1(1)                      ----------------->AG---------->DOF2                 ------->TEIL                      ----------------->AGL3                              <---------ARR11(3)     --------->ARR14(2)<---------------AGL15          --------->YAB1      <---------AGP1     <---------ARR14(2)--------------->AGL15         <---------ATHB12     --------->ARR11(3)  ------->GAMYB       <-----------------AGL2       --------->WOX13(1)<---------AtLEC2   ----------->GT1 ------>MYB46(3)      <-----------------AGL1--------->ANAC58      <---------LBD16<---------ALFIN1 ---->YAB1            ----------------->AGL2--------->ANAC58 <---------GLK1(1)  <---------ZAT14     <   acaaccgtatttgaaacagccttgtccaaatttggtatgccttgaaaagcattcaatcaatagaattctctggatggatctctacacttgttgtaaaatg  3676200                                                                                                   <-                                                                                             <-------                                                    <---------ZAT6                           <-------                                                <-------GAMYB                          <-------------                                               <---------ANAC58                        <---------ARR11(3)                                               <---------ANAC46                        --------->ARR11(3)                                               <---------ANAC58                        --------------      <----------DOF2                       <---------MYB52(1)--------->ARR11(3)       <-------------      <---------DAG2                      <---------ANAC58  <---------YAB1             -------------- --------->YAB1                           <---------ANAC58  <---------TOE2(3)     <---------YAB1  <-- ---------YAB1                    <----------DOF2<---------MYB52(1)       <---------TOE2(3)------->TEIL   cgatgatactttttcgagttttgtagtttctctcacctttgatttcgtttcgttgtgttactaagatagtttgtttgaggtgttatgaagatgtactttt  3676300                                                        <---------ANAC55(2)  ------>ZmHOX2a(1)                                     <---------ANAC58 --------->TOE2(3)                                      --------->ANAC55(2) --------->TOE1(3)                                      <---------ANAC58 --------YAB1                                        <---------MYB52(1) --DAG2                                            --------->ANAC55(1)                            --- ---DOF2                                           --------->ANAC46                              <--- --AtSPL8                                          --------->ANAC58                            ------ ->AtSPL8                                          --------->ANAC58                           <------ZmHOX2a(2) --AtSPL3  <------ZmHOX2a(1)                       --------->ANAC55(2)  ------>ZmHOX2a(2)    <------- ->AtSPL3--------->MYB59                  --------->TOE2(3)           <---------ARR11(3)     -------- ---------GT1            ------->TEIL     --------->TOE1(3)           --------->ARR11(3) <---------LBD16   tatccttagattaggaaatttcaaatgaaactatatcaacaaaacctcaatacacgttacgttgcaccatgtgatctctctgaaatgtaatctcggatca  3676400                                  --------->CCA1(2)                           <---------ARR11(3)                 --------->ARR14(2)                 <---------ARR11(3)       --------->ETT(2)    --------->ARR11(3) ------>YAB1     --------->ARR11(3) ------YAB1      <---------ARR14(2)                                  <-----------HVH21 --->YAB1     --------->HSFB2a(2)<---------ARR11(3)            <---------ALFIN1 --ARR14(2)   <---------HSFB2a(2)--------->AHL20(1)       <-----------HVH21    --------->AHL20(2) <-- ->ARR14(2)  <---------LBD16<------ZmHOX2a(2)<---------ZAT18  --------->MYB46(3)     ---------->DOF2   tcataagggtcgacttctggatattgcaagatcaatatatgaagttgtgcaatttttcaaggtcaccactcggtcactaaatgaaataaaagttttaggc  3676500                             <------MYB46(1)                             <------MYB83   --------->AHL20(2)                            ----------->ARR10                            --------->MYB111(1)         ------>NtERF2                     --------->MYB52(1)    <---------YAB1                --------->AHL20(2)      <---------AHL20(1)                            <---------DAG2          --------->CCA1(2) <---------AtMYB61   <---------AHL20(2)               <----------DOF2         --------->ARR11(3) --------->MYB59<---------AHL20(2)                   *TSS  <----------DOF2         <---------ARR11(3) --------->MYB46(2)  --------->YAB1              <---------At4g35610       ----------->ARR10   <--------P   --------->AHL20(1)                <---------WRKY38(1) ---------->DOF2----------->TBP   ----------->GT1   --------->DAG2    --------->DAG2 <---------ANAC58 ----NtERF2 ----------->GT1<---------MYB55(1) <-----------TBP        ---------->DOF2 <---------ANAC58   ctcaaaagtaagatatgtataaataaggggtaggtttggaaaaatattatttataaggcgaccgaagaaaaaaaagtcaacagctttgctttttttgttt  3676600               <---------ANAC58                     <---------HSFB2a(2)               <---------ANAC46                     --------->HSFB2a(2)                            --               <---------ANAC58           <---------ANAC46                                   <-------        <---------YAB1  <---------ARR14(2)<---------ANAC55(2)                                --------        <---------AHL20(2) <---------YAB1 <---------ANAC58                   <-----------------------TaNAC69(2)  <---------YAB1      <---------MYB46(3)  <---------ANAC58      --------->MYB52(1)    --------->ALFIN1   tgttatgtttttaattgtcgtgagtggttacgatttcttcaatttcgtaaacttctaggggagaaacaagggagatagagaagtgagagagggggaaacc  3676700        ------>ZmHOX2a(2)                                                            --------->ANAC46   <-------TEIL                                                                      --------->REM1(1)  --------->ARR14(1)                                                                <---------ZAT14 <---------ARR14(2)                                                             ------>NtERF2 <---------GLK1(2)                                                             <---------ETT(2) --------->ARR14(2)                           <---------MYB46(3)              <------NtERF2 --------->ARR11(1)                          <---------AtMYB61               ------>NtERF2 --------->ARR10               --------->HSFC1(1)                          <---------ANAC58 --GLK1(1)                     <---------HSFB2a(2)                         <---------ANAC58 ->GLK1(1)                     --------->HSFB2a(2)                    ------>ZmHOX2a(1)   ctagattcgatctccattcgatttgattcgtttctcgaatcgaagcgatggttttctacttcaaggcccgtcctgatgctggcgactacaccatcttcat  3676800                                                                                             <-------                                                                                            <--------                                                                                           <---------                                                                                          <----------                                                                              --------->HSFB2a(1)                                                                              --------->HSFC1(2)                                                                              <---------HSFB2a(1)                                                                              <---------HSFC1(2)                                                                             <---------ARR11(3)                        <---------At4g35610                                  --------->ARR11(3)                        --------->At4g35610                                  <---------ARR14(2)             <---------HSFC1(1)                                 <---------RAP2.6(3)<---------HSFB2a(2)             <---------HSFB2a(2)    <---------RAP2.6(2)        --------->RAP2.6(2) --------->HSFB2a(2)             --------->HSFC1(1)<---------------AtSPL3     <--------P         --------->ARR14(2)  <---             --------->HSFB2a(2)   --------->RAP2.6(3)<---------ANAC46       --------->GLK1(2)   <--- <---------ANAC58      <-----------ARR10          --------->ARR11(3)         <-----------ARR10------- <---------ANAC58     <------ZmHOX2a(1)           <---------ARR11(3)        <---------GLK1(2)--------   ggggcttgataagttcgagaacgaggagctcatcaagtacggcttccctgaagatgtctggtaagccgtcttaatcgagaatcttctcgatttttcccga  3676900                                      ------>ZmHOX2a(2) --HSFB2a(2)                         <------ZmHOX2a(2) -LBD16                             --------->ARR14(2) --GT1                              <---------ARR14(2) -GT1                           --------->HSFB2a(2) ------ATHB12                  <-----------------AGL1 ---ZmHOX2a(2)        --------->HSFB2a(2) -->LBD16       <---------ANAC58<---------HSFB2a(2)                                  --------->YAB1 ->HSFB2a(2)    <---------ANAC58<---------LBD16                                <----------DOF2   tcatctattgtttttgtttcgtttctcgagttttctcggatcggtatcagttttgaattgcccagtttttcatttagttggctttaatcgtattttgagt  3677000                           ------>ZmHOX2a(2)                  <---------TGA2(1)                  <---------bZIP60(1)                  --------->bZIP60(1)     --------->AHL20(2)           <---------YAB1      --------->At4g35610<---------ARR11(3)--------->ATHB12            --------->ICU4      <---------At4g35610--------->ARR11(3)<---------AHL20(2)       --------->ICU4    <-----------RAV1(2)<---------YAB1     <---------AHL20(2)<------ZmHOX2a(1)           <----------DOF2  <-----------HVH21    --------->ICU4 <-------TEIL    ---------->DOF2--------->YAB1     ------>ZmHOX2a(1)   ttgtggtcagatgttttgttatgtcatgatctattgttgattcatttattggaattgaaagaggaaggaaatgatgatcaagttttagtcctttcgatgg  3677100  Previous    Next  AGI:  At5g11490.1    Description:  adaptin family protein. similar to beta-adaptin, putative [Arabidopsis thaliana] (TAIR:AT4G23460.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN61515.1); similar to beta adaptin-like [Oryza sativa (japonica cultivar-group)] (GB:BAD61154.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44073.1); contains InterPro domain Armadillo-type fold; (InterPro:IPR016024); contains InterPro domain Clathrin/coatomer adaptor, adaptin-like, appendage, C-terminal subdomain; (InterPro:IPR009028); contains InterPro domain Adaptor protein complex, beta subunit (InterPro:IPR016342); contains InterPro domain Armadillo-like helical; (Int Range:  from: 3671819    to: 3676310    Orientation: Forward Links:  TAIR  MIPS    AGI:  At5g11500.1    Description:  similar to unknown [Brassica juncea] (GB:ABX10747.1); contains InterPro domain Protein of unknown function DUF814 (InterPro:IPR008532) Range:  from: 3676580    to: 3679353    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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