Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                             ------>ZmHOX2a(2)                             <---------At4g35610                             --------->At4g35610                 ----------->GT1        --------->YAB1                         <-----------GT1 ---------ZAT18  --------->ANAC58      --------->ICU4                   ----------->GT1 ->ZmHOX2a(2)    --------->ANAC58      <---------ATHB12                 --------->YAB1 ---ARR11(3)    --------->DAG2    --------->ANAC58                    --------->ZAT14 -->ARR11(3)   ---------->DOF2    --------->ANAC58<-------TEIL        <---------ZAT14              <-   tgtgccctcaaaaaacaaaaagcaaaatgttagcttaagcaatgatccaaggtccatagcataaaacaagagtatagtaattcacaatgtgagaatataa  3658500                                                                ---------->DOF2                                                           <---------ARR14(2)                               ----------->RAV1(1)         --------->ARR14(2)                            --------->ANAC58               --------->GLK1(2)                            --------->ANAC58              <---------GLK1(1)           --------->TOE2(3)                          ---------->DOF2                 --------->GLK1(1)==========================                         <------ZmHOX2a(1)                <---------HSFB2a(1)---------->DOF2                   --------->YAB1--------->MYB46(3)    <------ZmHOX2a(1)   <------ZmHOX2a(2)                 --------->AHL20(2)                    ===========================HOX2a_HOX2a        <----------DOF2<---------TOE2(3)       <---------------AGL15      <---------ARR11(3)       --   ---------->DOF2<---------AHL20(2) --------->ATHB12 ----------->GT1     --------->ARR11(3)  ------- ---------ID1    <---------AHL20(2)--------->GLK1(2) <---------TOE2(3)---------->DOF2----------->GT1   aaaaacaaagctttgattttttaataaggaaagcaacaatctttggaacctagataaggaaaatccgaaagggaaagatcaaagaaatcgtcaatacaaa  3658600                   --------->At4g35610                <------ZmHOX2a(2)               --------->ARR11(3)        --------->At4g35610     <------ZmHOX2a(2)    --------->ARR11(3)                                                                         <-----    <---------ARR11(3)                                                                         ------   <------ZmHOX2a(1)                                                     <----------ID1    --------->AHL20(2)   ====================HOX2a_HOX2a          --------->ZAT14      ------->GAMYB             <---------AHL20(2) =========HOX2a_HOX2a             --------->At4g35610           ----------->GT1    ----------->GT1 -------->DOF2 <---------ARR11(3) <---------At4g35610   <---------ANAC55(2)      --------->At4g35610 --->DOF2    ----------->ARR10    --------->ZAT14       --------->ANAC55(2)      <---------At4g35610   ggaaaggatcatcggaagatcatcagaccagaccagagcagaccagtccagacagattacttaacaacgaaaaaaacaacaagagctgaaaaattatata  3658700                        --------->HSFC1(2)                        <---------HSFC1(2)                   ----------->GT1                   --------->LBD16         <---------At4g35610         --------->At4g35610  <-----------RAV1(2)         --------->ZAT2 --------->HSFB2a(1)         ---------->DOF2         <---------ZAT2 <---------HSFB2a(1)       <-------TEIL --------->ATHB12--------->TOE1(2)               --------->CCA1(2)      ----------->GT1 ----AHL20(2) <---------GLK1(1)              ------------------------>ANAC81  ---------->DOF2 --->AHL20(2) --------->GLK1(1)          ---------->DOF2                <----------ID1 <---------O2   aatcgattggaagctgaaatctgggaaatttctcaggctattacaaagaagattcaaagtagaagaaattcagagggaaaaaaagagagacctgggttct  3658800                                                                                            <--------                                                                                            ---------                                                                                           <---------CCA1(2)                                                                                         <---------CCA1(2)                                                                                     <---------ANAC58                                                                                     <---------ANAC55(2)                        ---------->DOF2                          <---------At4g35610 --------->ANAC55(2)                    ----------->GT1                              --------->At4g35610 <---------ANAC55(1)               <---------At4g35610                      <------ZmHOX2a(1)            <---------ANAC46             <---------ANAC58                     <------ZmHOX2a(1)       --------->YAB1------->TEIL             <---------ANAC58     >>>>>>>>>TBF1 ------------------------>ANAC81      <---------ANAC58 <------ZmHOX2a(1) <---------TOE2(3)        <------ZmHOX2a(1) ---------->DOF2       <---------TOE1(2)   tcaggacttgttcttgcttctgaggtaaaagttgaagaagaaggaaggagaaggagaaggagaagaaagcagacaatgagaagtcttacgtatatatctg  3658900                                                                                                <----                                                                                       --------->ANAC55(2)                                                       --------->At4g35610           <-----------GT1          <---------------AtSPL8                       <---------At4g35610        <---------ARR14(2) -ARR11(3)--------------->AtSPL3  ------>ZmHOX2a(1)  <---------ZAT18              --------->ARR14(2) >ARR11(3)--------------->AtSPL8*TSS       --------->At4g35610               --------->MYB52(1) -----   tgcaagtcttgtgaggtactcttctctctctctctcctcaaaatcagcgaagcagtgagcttctcagtctctctctatctatcggattcacgttttaagt  3659000                                                                                             <-------                                                                                  --------->AHL20(2)                                                                                  --------->AHL20(1)                                                                    ----------->GT1<---------AHL20(2)                                                                   <---------TOE1(3)       ----------                                                                   <---------TOE2(3)   <---------AHL20(2)                              ------------>CBF                <---------AtLEC2    <---------ARR11(3)                   <---------ANAC46                    --------->AHL20(2)         <---------AHL20(2)                   ----------->GT1                 --------->ICU4 ---------->DOF2 --------->ARR11(3)                 --------->ZAT14        <----------DOF2<---------AHL20(2)         <---------AHL20(1) -----ARR11(3)   --------->ZAT18       <---------DAG2 --------->AHL20(2)         --------->AHL20(2) ---->ARR11(3)   <---------ZAT14    <-----------GT1--------->AHL20(2)        --------->AHL20(2)<-----   tctctctgaaatgtgtaagtgtagtagaaaaaaacaatttacctttcttcgaaatatttaatttgcattaaagttataagaaaatatattttataaagga  3659100                                             --------->ALFIN1                                           <-----------RAV1(1)                                           --------->ALFIN1               <---------RVE1(1)    <------NtERF2                    <---------ZAT14              <---------ARR11(3)   --------->LBD16          --------->ATHB12          <-----------GT1           <------ZmHOX2a(1)      <---------ANAC46          --------->YAB1       --------->GLK1(2)          <------MYB46(1)         <---------ANAC58         <---------YAB1   --------->ANAC58 <---------AHL20(2)<---------AHL20(2)  <------ZmHOX2a(1) <---------ICU4     --------->ANAC58 --TOE2(3)<------MYB83            <---------ANAC58       --------->YAB1  ----------->HVH21 >DOF2  <--------P<---------YAB1  <---------DEAR3(1)   <---------AHL20(2)----------->TGA1  <--------- -ZmHOX2a(1)  --------->ARR11(3) <---------LBD16      --------->YAB1 --------->ZAT14<----------DOF2   ttttaaaatggtaggagatttttatttgtataaatggcggaggaagtgtggcagaataaaaatgatagcacttctctgacgaaattctttactcttttgt  3659200                                     <---------DAG2                         ----------->GT1                                     <----------DOF2                 <---------ANAC55(2)                                 <---------ZAT18                     <------MYB46(1)                                 <-------TEIL                        <------MYB83                                 <---------ZAT14                    --------->MYB111(1)                                 --------->ZAT14                    --------->MYB59                             --------------->AtSPL3            <---------AHL20(2)                             --------------->AtSPL8            --------->AHL20(2)                             --------->MYB59                --------->AHL20(2)                         <---------AHL20(2)                 <---------AHL20(2)                        <---------AHL20(1)                  <---------ARR11(3)    <---------GLK1(2)   --------->AHL20(1)                  <---------AHL20(1)    --------->ARR14(2)  <---------AHL20(2)                  --------->AHL20(1)    <---------ARR14(2)  --------->AHL20(2)     <----------DOF2 <---------YAB1       <---------YAB1 -DOF2              <---------AHL20(2)      <-----------GT1 --------->ARR11(3)<---------ANAC46      -   ttggcagatttggctgttttagttaatttattcggtacactttttttttctttacttaagaatatattattaggtatgttgtttatatgaatgaattgtg  3659300                                                              --------->AHL20(2)                                                            <---------YAB1                                                           <---------AHL20(1)                                                         <---------YAB1    <-------TEIL      <---------AHL20(2)                               <---------ICU4   --------->HSFC1(2)      --------->AHL20(2)                              <---------YAB1    <---------HSFC1(2)      <--------ATHB1                                  --------->ICU4    <---------HSFB2a(1)      --------->ATHB51                   <---------AHL20(2)<---------AHL20(2) <---------MYB52(1)      <---------ICU4           <-----------GT1<---------AHL20(2)     ---------->DOF2     --------->ICU4        <---------AHL20(2)--------->AHL20(2)   <---------HSFB2a(2)    <---------YAB1     <---------ATHB51      --------->AHL20(2)<---------AHL20(2)   --------->HSFB2a(2) <---------MYB52(1)   --------->YAB1        <---------AHL20(2) <---------WOX13(1)<---------AHL20(2)    ----------->GT1 ---------->GT1   <-----------GT1     ------->TEIL <---------YAB1--------------------->WRI1  <-------   aagagtaataatttagaaattttctatatttttttacatgtatttgattaattttgattattatttttttagaaagcttcgttgtttcgttatatttacg  3659400  Previous    Next  AGI:  At5g11460.1    Description:  senescence-associated protein-related. similar to senescence-associated protein-related [Arabidopsis thaliana] (TAIR:AT2G25690.2); similar to senescence-associated protein-related [Arabidopsis thaliana] (TAIR:AT2G25690.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44134.1); contains InterPro domain Protein of unknown function DUF581 (InterPro:IPR007650) Range:  from: 3656812    to: 3658932    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version