Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                 ----------->GT1                                             ------->MYC2                                             <-------MYC2                                             <-------MYC3                                             ------->MYC3                                        --------->AtLEC2                                   <---------WRKY18(1)                                  --------->WRKY12<---------GLK1(1)                  <---------AHL20(2)                                  --------->WRKY38(1)                             <----------DOF2 --ZmHOX2a(2)                 <-------TEIL ------->TEIL             <----------DOF2  --------->AHL20(2)   caaatgtctccatgagttggcatttgtgttgatacattgaccatgcatgtggatatatgatcaacacaaacttttgttaatgctcttttaattaacacat  3644100                                                                                                  ---                                                                                                  ---                                                                                                <----                                                                                                <----                                                                                               <-----                                                                                       <-------TEIL                                                                                      --------->CCA1(2)                                                                                      --------->ARR14(1)                                                                                      --------->GLK1(2)                                                                                     <---------GLK1(2)                                                                                     --------->ARR14(2)                                                                                     --------->ARR11(1)                  <---------TOE2(3)          ---------->DOF2                         <---------ARR14(2)        --------->DAG2                   --------->ANAC58                           <---------GLK1(1)       ---------->DOF2                   --------->ANAC58                           <---------HSFB2a(1)   --------->AtLEC2                   <------ZmHOX2a(2)                            ----------->ARR10   --------->ANAC58                  --------->ARR11(3)                       ---------->DOF2--------   --------->ANAC58    <---------AHL20(2)--------->AtLEC2                 --------->YAB1<---------DEAR3(1)   ataacatgcaaaagttgtctaatgttttattttgtctacgatcatgcaaaagaaatactagcagtataagtttcaaaaataaaaggagattcggcgttaa  3644200     --------->ANAC58     --------->ANAC58 ------>TOE1(3)                                                 <---------AHL20(1) ------>TOE2(3)                        --------->MYB52(1)       --------->AHL20(1) -----TOE2(3)                         ------->GAMYB          --------->AHL20(2)            --------->YAB1 -----YAB1                        --------->MYB46(3)       <---------YAB1              --------->ICU4 ----DOF5.7(2)               ----------->GT1               --------->ICU4       ---------->DOF2 ->DOF5.7(2)           ------->TEIL  <---------MYB52(2) <---------YAB1        <---------YAB1     ----   cattaacaagcactaaatgcaaatgtatgcatagtaacaactaacaacgtcgaaatttgtcattaatatatatgttaactattaaagccatatttataaa  3644300                                                                             <---------ATERF1(2)                                                                             --------->ATERF1(2)                                                                             --------->ANAC58                                                                      <---------ICU4                                                                     --------->ICU4                                                                   --------->YAB1         --------->ATHB12                                                                  <---------YAB1          <---------ICU4                                                                ----------->GT1          <---------YAB1                                                                --------->YAB1 --------->At4g35610                                                               <---------YAB1--------->ANAC58                                                               ----------->GT1 <------NtERF2                                                             --------->YAB1  --------->ANAC46     <------MYB83--------->DAG2                              <------ZmHOX2a(1) <---------At4g35610     <------MYB46(1)                                       <---------TOE2(3)--------->RAP2.6(3)   ---    --------->MYB59                                        <---------TOE1(3)--------->SPL7-------->ATHB1 ----->YAB1    ---------->DOF2           <---------YAB1<----------DOF2--------->YAB1    <---------ARR11(3)   cataatttggtatgtccaaaaggtgttttgtactactggccttataatttgtttttggtttaaggatgataataatcagacggcagacaaaatcattgag  3644400                                                                                           <---------ANAC55(2)                                                                                           <---------ANAC55(1)                                                                                           --------->ANAC55(2)                                                                                           <---------ANAC58                                                                                          <-------TEIL                                                                                         --------->CCA1(2)                                                                                        --------->ARR14(2)                                                                                    ------->PIF5                                                                                    ------->MYC3                                                                                    ------->MYC4                                                                                    <-------MYC4                                                                                    <-------MYC3                                                                                    ------->MYC2                                                                                    <-------MYC2                                                                                    <-------PIF5                                                                                   <---------O2                                                                                   <---------PIF3(3)                                                                                   --------->PIF3(3)                                                                                   --------->TGA1a                                                                                   <---------ANAC46                                                                                   <---------TGA1a                                                                                   --------->O2                                                                                 <-----------RAV1(2)                                                                                 <---------ALFIN1                       ------->GAMYB                                            <------NtERF2                    <-----------GT1                                             ---------------->PIF3(2)                <------ZmHOX2a(1)            <---------ARR11(3)                ------>NtERF2                ========================HOX2a_HOX2a--------->At4g35610         <-----------------PIF3(1)                ============================HOX2a_HOX2a                       --------->PCF5              --------->LBD16                --------->ARR11(3)               --------->PCF2             <---------LBD16                --------->GLK1(1)                 <---------TCP15(1)             --------->HSFB2a(2)         --------->HSFB2a(2)                --------->DEAR3(1)        <---------HSFC1(2)             --------->At4g35610                 --------->ANAC58<---------ANAC46        --------->HSFB2a(1)          ------>ZmHOX2a(2)                     --------->ANAC58<---------ANAC58        --------->HSFC1(2)         <---------ARR11(3)         ---------->DOF2 <---------TCP20        <---------HSFB2a(1)  ----------->HVH21 --------->TOE2(3)          <---------At5g28300  ---------->DOF2 <---------KAN4(2)--------->ARR11(3)         ===============================bZIP_DOF ------->DOF2<---------HSFB2a(2) ------>ZmHOX2a(2) <---------At4g35610 <-----------HVH21<---------ARR14(2)   aaaagaaaggagtttccaggaataaccctctctgatcgatcttctgaaatcttagctaaaccccaaaagagtgagtcacggccccacgtggatacgtgaa  3644500                                                                                   <---------ALFIN1                      <------------CBF                                        ------>NtERF2                  --------->LBD16--------->ARR11(3)                           <---------ATERF1(1)                 <---------ANAC55(2)                                        <---------ANAC58                 --------->ANAC55(2)            *TSS                        <---------ANAC58                 ----------->GT1 --------->GLK1(2)                  --------->ANAC58                -         <---------ANAC46  ----------->GT1    <-----------GT1       --------->ANAC58                -   --------->ATHB12<---------MYB52(1)     <---------RVE1(1)         --------->ANAC46------>ZmHOX2a(1)   tcacatcagtggcataaatccgtaaattgtagtaaaatctagaggtattttccaagttagacttccatataagctattgctggctcctctcccaatttcc  3644600                                                                                                    <              <-----------GT1                                                                      --           <---------ICU4                                        <------NtERF2                    ---    <-----------GT1                          <---------SPL7      <---------At4g35610             ----   --------->AHL20(2)                   <---------AtMYB61     <------NtERF2                     ----- -------->ATHB51 <----------DOF2      <----------DOF2         --------->ATERF1(1)        ------>ZmHOX2a(1) -------->AHL20(2)               <----------DOF2       ---------->DOF2   <---------CCA1(2)   --------   cataatttactaaatatcactttctagtctcttctctttactttggtcgtccacaatgaaaggaggcagcctctcgtttctcttcgttctcctaatcgcc  3644700                                    <---------ICU4                                    --------->YAB1             <---------YAB1         --------->LBD16        <---------ATHB12               --------->ICU4        --------->ANAC55(2)     --------->ICU4               --------->YAB1  <---------ALFIN1     ----------->HVH21                     <---------ICU4 -----------HVH21      ----------->TGA1               ------->TEIL ------->AtMYB61  <----------DOF2  <---------YAB1 --------------->AtSPL8           --------->ARR11(3) ------>MYB46(3) <---------ANAC58--------->YAB1   <---------------AtSPL3         <---------YAB1 -->NtERF2<---------MYB52(1)--------->At5g28300   --------------->AtSPL3  --------->ARR14(2) ---->DEAR3(1)   <---------ANAC58<---------ICU4   <---------------AtSPL8  <---------ARR14(2) ->ANAC46<-----------HVH21<---------ANAC46  <-------TEIL    <---------ATHB12 <---------AHL20(2)   ---   accatcacttccgtcatttgcttcagtgacggtaatcatcatcacatacatagacgtacttaatcatgtttaagcgtatatatatgattttgcattttca  3644800                                                                              --------->bZIP60(1)                                                                              =======================                                                                              <---------TGA1a                                                                              =======================                                                                              --------->O2                                                                              <---------O2                      --------->GLK1(2)                                    ----------->HVH21                 <---------MYB59                                           ----------->TGA1                 --------->TOE1(3)                                 ---------->DOF2         <----------DOF2            --------->GLK1(2)              =====================bZIP_DOF----- -------->HVH21  --------->TOE2(3)  <-----------ARR10      --------->GLK1(2)  --------->TGA1a  ------   gtgacatttttctttaaaacctaaattctgttttagcgaatcgaagcttaattctgtcgagtttctatccaaagtccctgacgagacattttgacaaaaa  3644900          <---------ANAC58     <---------MYB46(3)   <-------GAMYB   <---------ANAC58   <---------ANAC58  <------MYB46(1)  <---------MYB46(3)                                          --------->TOE1(3)          --------->AHL20(2)  <------MYB83                                                <---------DAG2         <---------HSFC1(2) <---------AtMYB61                                            --------->TOE2(3)      --------->HSFC1(2) --------->MYB59                                            ------->TEIL            ------->TEIL ==========MYC_MYB                                         <-----------GT1  --------->ARR11(3) =====bZIP_DOF        <---------ZAT14            --------->ANAC58           <---------------AtSPL8 <- ---->DAG2<---------ANAC46              --------->ICU4  --------------->AtSPL8   --------->ANAC46 <-- ---->DOF2<---------ANAC58 <---------ZAT18       --------->ANAC58       ---------->DOF2<----------DOF2   agtttggttgtgacttgtaagtagtctagtggtcttagagtaatgttttgcaccctagtttgaaccttatttgtaaaagatgtacgaagcttttaataga  3645000  Previous    Next  AGI:  At5g11420.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G25460.1); similar to unknown [Ricinus communis] (GB:CAB02653.1); contains InterPro domain Protein of unknown function DUF642 (InterPro:IPR006946); contains InterPro domain Galactose-binding like (InterPro:IPR008979) Range:  from: 3644548    to: 3647296    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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