Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                               <---------YAB1                                           --------->YAB1                                    <---------TOE2(3)                                 <---------YAB1                              ------>ZmHOX2a(2)                              ============================HOX2a_HOX2a                             <------ZmHOX2a(2)                                     --------->TOE1(3)                            <---------ARR11(3)     ------>ZmHOX2a(1)            <---------WRKY18(1)            ---------->ID1  --------->ARR11(3)   ------>ZmHOX2a(2)             --------->WRKY38(1)          <-----------RAV1(1)=============================HOX2a_HOX2a<---------ANAC58        <----------DOF2     --------->AGP1<---------YAB1             <---------ANAC58    <---------GLK1(2)       --------->ARR14(2) <---------ARR11(3)    <---------ANAC46 -------->LBD16             <---------AGP1--------->ICU4     --------->LBD16   --------->WRKY12 -->ZmHOX2a(1)              <---------ARR14(2) --------->ARR11(3)  <---------YAB1  --------->TOE2(3)<   tccccagtttctttgttgcattcagttcaagatctattaatgttatgatgatccttcggtttccgagttttgcttgttttgttgaccttaatttttctta  3621200                                  <---------ANAC58                        <---------MYB52(1)                    --------->LBD16    <---------GLK1(1)                <---------ANAC58         <---------AHL20(2)       <---------AtLEC2          <----------DOF2                 <--------         --------->AHL20(2)       <---------ANAC58         <---------ANAC58      --------->DAG2        --------->AHL20(2)  <---------AHL20(2)             <---------ANAC58     ---------->DOF2 ---------GLK1(2)   ------>ZmHOX2a(1)--------->ATHB12------>ZmHOX2a(1)  <---------ANAC58 <-----------GT1   ctgattctaaatttataaattcctggttatatacttgcatgatttctctaatgtcctcttggctttggacattttcgtttggaaaagtttttaactttgc  3621300                                                                        <---------GLK1(2)                                                                       --------->YAB1                                                  ------->TEIL         <--------ATHB1               -                                         <------MYB83                 <---------YAB1             ----                             <XXXXXXXXXXXXXXXXXXXXXMIR833-3P          --------->ICU4 --------->At4g35610                     <---------YAB1      <------MYB46(1)              <---------ATHB12          -----  ---------->DOF2  --------->YAB1       <---------AtMYB61 ---------->DOF2            <---------At4g35610 --DOF2<----------DOF2--------->YAB1 <-----------RAV1(1)  <---------ZAT14<---------YAB1        ------   aactcaaagctttactaccaagtatcatcgtgtttgtaaatgttggtctatgaatttgagtaaagagagacaatgattcttgttatgagctgtagaataa  3621400                                         <---------ANAC58                                         <---------ANAC46                                     <---------ANAC46                                     <---------ANAC58                              <----------DOF2       --------->AHL20(2)    <---------ANAC58               <---------ZAT14                     -----  ----------->GT1            <---------ANAC58     <---------AHL20(2)                            ----- --------->DOF2              <---------ANAC46    --------->AHL20(2)                             ----- ------->GT1             <---------ANAC58<---------ANAC55(1)--------->ZAT14                    ------ ---->DAG2               <---------ANAC58<---------ANAC58   --------->REM1(2)                 ------- ---->DOF2         <---------AHL20(2)<---------ANAC58  <---------At5g28300               --------->YAB1   agtaaagaaaaaaatgaagaatttatgacttgcgttttggcttgcgtgccatttattcacagtgaagactggaagatgtgttcttcttgaatcaaaaaac  3621500        <---------YAB1 <---------TGA1a                                                                      <---------ANAC58 ==============================================bZIP_DOF                               <---------ANAC58 --------->TGA1a                                                                      <---------ANAC46 --------->O2                                                  --------->ANAC58      ------>NtERF2 --------->ANAC58                                              --------->ANAC58      <------NtERF2 --------->ANAC58                                              --------->ANAC46     <---------RAP2.3(1) --------->bZIP60(2)                                  --------->ZAT2                --------->LBD16 --------->ANAC55(2)                          <---------ARR14(2)                   <---------DEAR3(1) ---->ANAC46                                  --------->ARR14(2)                   <---------RAP2.6(2) ---->ANAC58                             --------->MYB52(1)   *TSS         <---------WRKY18(1) ---->ANAC58                           --------->MYB46(3)   ------>ZmHOX2a(1)      <---------RAP2.3(2) --->RAP2.6(3)     <-------TEIL------------>CBF   ------>ZmHOX2a(1)       --------->WRKY38(1) -->MYB52(1)      <---------MYB52(1)---------->DOF2   <---------At4g35610<---------WOX13(1)      <---   ggcacgtcttatgagtctccgttcatcggtgtctgcaattaagcaccggttcctcgagcttcctcactcaattcgattgaccaatgcggcgttctcgttt  3621600                                     ------>NtERF2                                  <---------RAP2.3(1)                               <---------TGA2(2)                               <---------ATERF1(1)                               ------>NtERF2                            --------->At4g35610                            <---------At4g35610                    --------->DOF5.7(2)                    <---------MYB52(1)                  --------->O2----------->HVH21                  --------->TGA1a <---------ATERF1(1)                                          ------                  <---------O2--------->WRKY12           <---------ICU4           --------->At5g28300                  <---------TGA1a ------>NtERF2          --------->YAB1           <---------MYB52(1)               ----------->HVH21 --------->ANAC58       <---------ATHB12         ----------->GT1               --------->DEAR3(1)--------->ANAC58<---------At4g35610             --------->LBD16 --------RAV1(1)------>NtERF2 ----------->TGA1   --------->At4g35610           <---------LBD16 <-----   tgttgctcaagttttctccgacgttaccttcgctgacgcctccactatctctgctccaatcttcaccatgtctactcgtgctccggtaaattttctcagc  3621700                                   <---------MYB52(1)                                  <-------GAMYB                             <---------ANAC58                             <---------ANAC46                         <-------GAMYB                  <---------ANAC58                           <-                        <---------ANAC58      <---------AHL20(2)                                   <-                        <---------ANAC58      --------->AHL20(2)                          <------ZmHOX2a(1)                        <---------ANAC46      <---------YAB1                          <---------TOE2(1)                       ------>NtERF2         --------->AHL20(2)                 --------->LBD16   <--                    --------->At4g35610      --------->AHL20(1)              --------->ZAT18    -----             --------->ZAT6  <---------ANAC58<---------AHL20(1)      <---------ZAT14  <---------TOE1(1) --->At4g35610      <---------At4g35610--------->HSFB2a(2)           --------->ZAT14<------ZmHOX2a(1) ----At4g35610     --------->ANAC46<---------ARR14(2)   <---------ANAC58    --------->ALFIN1<--------   tattctcttgttctatcactcccgctgcgttgcttcggttactggaatataatttgtttcttacgaagcagtacagaggtgcccgaggacgaggacgagg  3621800                                    ----------->TGA1                                  <------------ATHB5                                  <---------ICU4                                  --------->YAB1                             >>>>>>>>>SPL5                             >>>>>>>>>SPL1           <---------HSFC1(2)>>>>>>>>>SPL4           <---------HSFB2a(1)   <---------ATHB12           --------->HSFB2a(1)   --------->ICU4                                               ------>NtERF2   --------->ALFIN1        <---------SPL7                                                    <------- <---------ZAT2          --------------->AtSPL3                      --------->GLK1(2)       -------- <---------O2          <---------SPL7     --------->LBD16           <---------GLK1(2)        -------- <---------TGA1a       ------------------>SPL14                     <---------ARR14(2)       -------- --------->ZAT2       ------>ZmHOX2a(2)  <---------ANAC46  <---------MYB52(1)                -------- -----NtERF2         <------ZmHOX2a(2)  <---------LBD16  --------->MYB52(2)       <---------ATHB12 ----------RAV1(2)  --------->ARR14(2) <---------bZIP60(2)<-------GAMYB <---------YAB1      --------- -------TOE1(1)     <---------ARR14(2) <---------ANAC46<---------MYB52(1)       --------->WOX13(1) ->NtERF2 ----------->ARR10<---------SPL1(2)       <------ZmHOX2a(2)--------->ARR14(2)    ----------- -bZIP60(2)--------->HSFC1(2)--------->SPL7      <---------GLK1(1)----------->ARR10<---------ICU4   ccgaggtgggagaagtttctccgatcgtccgtacaatgatgacgcgggaagagatcagttcgttactggagattctcattttcaatcagttcatgacgcc  3621900                                                                                                    <                                                                                                    -                                                                                                    -                                                                                                    -                                                                                                    -                                                                                                    -                                                                                                    -                                                                                                    -                                                                                                    -                                                                                                   --                                                                                                   --                                                                <---------ALFIN1                   --          ------>NtERF2                                         ------->GAMYB                      --        --------->RAP2.6(3)                                     --------->AtMYB61                  --        <---------LBD16                                        --------->MYB46(3)                  --      --------->ARR14(2)                                       <---------ABI4(2)                   --      <---------ARR14(2)                                       <---------MYB52(2)                 ---  <-----------------AGL1                                       <---------MYB55(2)                 ---  <-----------------AGL2                                    --------->MYB46(3)                    <--  ----------------->AGL1                                   <------NtERF2                          ---  ----------------->AG                                     --------->At4g35610                    --- <-----------GT1      <---------DAG2                       <---------At4g35610        ------->TEIL<-- --bZIP60(1)          --------->TOE2(3)                 --------->At4g35610        <---------ANAC55(2) ->bZIP60(1)          --------->TOE1(3)                 <------NtERF2              --------->ANAC55(2) ->ANAC58 --------->LBD16                              ----------->RAV1(1)       <-----------GT1 <--- ->ANAC46<---------RAP2.6(2)                         --------->At4g35610   --------->YAB1        ---- ->ANAC58<---------LBD16                      <----------DOF2 -------->P  <---------ATHB12       ---- >RAP2.6(3)         ------->TEIL      --------->At4g35610 --------->RAP2.6(2) <---------ICU4   <----- >TGA1--------->GLK1(2)        ----------->RAV1(1)   <---------At4g35610--------->WOX13(1)    -------   aatttccgattccggcatggtgaaccttatcgacaacatcagcctccgcttgatcagcggcagcaaccaccgttcaatcagaattacgaatttcgacctc  3622000        <---------O2        --------->O2     ----------->HVH21     <------NtERF2    <---------RAP2.6(3)    <-----------TGA1    <-----------HVH21    ------>NtERF2   --------->RRTF1(3)   --------->RAP2.3(2)   --------->RAP2.6(2)   --------->RAP2.3(3)   --------->RRTF1(2)   --------->DEAR3(1)   <---------ATERF1(2)   --------->ATERF1(2)   --------->ANAC46   --------->O2   --------->bZIP60(1)  <------NtERF2  --------->ATERF1(1)  --------->RAP2.3(1)  --------->RRTF1(1)  --------->ERF1 --------->ABI4(1) <---------ATERF1(1) ------>NtERF2 ---------DEAR3(1) -------->RRTF1(2) -------->RRTF1(3) -------->DREB2C(2) -------->RAP2.3(2) -------->ATERF1(2) -------->RAP2.6(2) -------->RAP2.3(3) -------->DEAR3(1) ------->RAP2.3(1) ------->ERF1 ------->DEAR4(2) ------->RAP2.6(1) ------->RRTF1(1) ------->ORA47(2) ------->ATERF1(1)                    ------>MYB46(1) --->NtERF2                           ------>MYB83 ------>LBD16                   <---------WRKY12 -------At4g35610              <---------MYB52(1) ------>ABI4(1)                --------->WRKY18(1)                   <---------ANAC58 ------>At4g35610             <-----------HVH21                      <---------ANAC58 -------ATERF1(1)            <---------ANAC55(2) --------->LBD16    --------->ZAT2 ------ALFIN1        ----------->RAV1(1)<---------ATHB12            <------NtERF2           --------- ----->ANAC46   --------->At4g35610 --------->TOE2(3)   --------->YAB1        <---------ALFIN1 ----->DEAR3(1)--------->MYB52(2)   <---------MYB59    <---------ATHB12     <---------ATERF1(1) ----ATERF1(1)<---------WRKY12--------->LBD16   <---------ANAC46 <---------LBD16      <---------MYB52(1) -->AtMYB61 <-----------HVH21<---------ANAC46--------->ARR14(2) --------->ANAC46 <---------ALFIN1   -   cgccgccgtcacgaggtcagtggcaacaattccgtcaacctaatcagtttccgtctaatcaaaactacgcggcttgccctccccctccgttctatcaaaa  3622100  Previous    Next  AGI:  At5g11340.1    Description:  GCN5-related N-acetyltransferase (GNAT) family protein. similar to GCN5-related N-acetyltransferase (GNAT) family protein [Arabidopsis thaliana] (TAIR:AT5G16800.2); similar to GCN5-related N-acetyltransferase (GNAT) family protein [Arabidopsis thaliana] (TAIR:AT5G16800.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN65722.1); contains InterPro domain Acyl-CoA N-acyltransferase (InterPro:IPR016181); contains InterPro domain GCN5-related N-acetyltransferase; (InterPro:IPR000182) Range:  from: 3619156    to: 3621302    Orientation: Forward Links:  TAIR  MIPS    AGI:  At5g11350.1    Description:  endonuclease/exonuclease/phosphatase family protein. similar to endonuclease/exonuclease/phosphatase family protein [Arabidopsis thaliana] (TAIR:AT1G73875.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44152.1); contains InterPro domain Endonuclease/exonuclease/phosphatase (InterPro:IPR005135) Range:  from: 3621562    to: 3625646    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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