Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                     <---------GLK1(1)                                                   --------->GLK1(1)                                                  <---------ARR11(3)                                                 <---------HSFB2a(1)                                                 --------->HSFB2a(1)                              ---                                          <---------ARR14(2)                                      ---                                         <---------SPL7                             =================                                        --------->HSFC1(2)                          <---------TGA1a                                        <---------HSFC1(2)                          <---------ANAC46                                        <---------HSFB2a(1)                         <---------ANAC58                                        --------->HSFB2a(1)                         <---------ANAC58                          <------ZmHOX2a(1)<-------TEIL  <---------HSFB2a(2)        --------->O2  ---                  =============================RAV--------->ARR11(3)                --------->TGA1a                  ----------->RAV1(1) <------ZmHOX2a(1)  --------->HSFB2a(2)        <---------O2 ----                <---------ZAT2     <-----------RAV1(2) <---------HSFB2a(2) --------->ZAT2        <--- --->RAV1(2)    --------->ZAT2   ----------->RAV1(1)   --------->HSFB2a(2) <---------ZAT2     -------   agggtcgagtccgagcccagcaccagtaggactcccaacaggaggttcggaagatttctcgagaaccaaaacatcccagcatgctaacgtgagcgagtgt  3618800       --------->ANAC58       --------->ANAC58     --------->CCA1(2)    <---------ARR11(3)  --------->ANAC58  --------->ANAC58                    <----------DOF2 ------>ANAC46                  --------->YAB1                                                     <- ------>ANAC58            ================HOX2a_HOX2a                                             <-- ========================bZIP_DOF  ------>ZmHOX2a(2)                                              *TSS ------>ANAC58            ------>ZmHOX2a(1)                                                     ----- ----->ZAT18           ===================HOX2a_HOX2a   <---------ALFIN1           --------->At4g35610 ------ZAT18           ------>ZmHOX2a(1)    <----------DOF2                        <---------At4g35610 -->ALFIN1    <----------DOF2  <---------YAB1    <<<<<<<<<TBF1                  <---------At4g35610<-   gcgcaagataagcctgctatacttcctcctactatgatcgctttccctttcttcttccccatctcatcaaatcaaatgtttcttctgcttcacaaattgt  3618900                                                                                                    <                                                                            ------------>CBF        <                                                                  --------->HSFC1(2)               <-                                                                  <---------HSFB2a(1)              --                                                                  <---------HSFC1(2)          <------ --------TOE2(3)                                                  --------->HSFB2a(1)     ----------- -------DOF5.7(2)                              <------ZmHOX2a(1) <---------YAB1        --------->ANAC58 ---->DOF5.7(2)                       <---------MYB46(3)         --------->ICU4        --------->ANAC58 --------TOE1(3)                   <---------ANAC46       <-----------RAV1(1)   <---------KAN4(1)<---   taacgataagagagagtttcaacttaatgaaacctctgggtggataagaggattagaactatgtgggatgattccaggcccaatattccaagcccaatcg  3619000       --------->AHL20(2) ------MYB83 ------MYB46(1)             <---------MYB52(1) --------MYB46(3)          <-------GAMYB ------->MYB59         ------>ZmHOX2a(2) ---ATHB12            --------->GLK1(1)                                                  ------------ ->CBF <---------AHL20(2) <-----------RAV1(1)       <---------GLK1(2)             --------->ATHB12 ------MYB52(1)       <---------GLK1(1)          --------->YAB1                   --------->YAB1   tttggtcatataaataagaaactgatctctgttgtgcgtcaaaactatgtattagaatttcattttgtccaggcccagaatgaattataggcccaatagt  3619100                                                                                               ------                                                                                               <-----                                                                                            ---------                                                                                            <--------                                                                                            <--------                                                                                           --------->SPL7                       <---------AHL20(2)                                                 <---------SPL1(1)                     <-----------TBP                                                     <---------SPL7                   --------->AHL20(2)                                                    <---------SPL1(2)               ------->TEIL                                                             <---------ANAC58            --------->ANAC58<---------ARR11(3)          <----------DOF2                 <---------ANAC58            <---------MYB52(2)       <---------GLK1(1)  *TSS                           --------------            --------->ANAC58--------->ARR11(3)          <---------DAG2               ---------------- >CBF      <---------TOE1(2)<---------GLK1(2) <---------CCA1(2)            <----------DOF2--------->SPL1(1)   ctattctctctcccacgaacattatttatagatttttgggtttcccctaaatctcgagctttttcttcccttgatttctttggtctctgtccgtacgacg  3619200                                                                                               ------   <---------ARR11(3)                                                                          ------   <---------ARR14(2)        --------->ZAT2                                                 <--------   --------->ARR11(3)        <---------At4g35610                                            ---------  --------->GLK1(1)          <---------ZAT2      --------->ARR14(2)                         <-------- --->O2              <---------DEAR3(1)      --------->At4g35610                            <-------- ----O2             <------NtERF2            <------NtERF2                                  --------- -->HVH21           <---------------------WRI1   <---------ARR14(2)                       ----------- -TOE2(1)          ------>NtERF2             <---------At4g35610                     <---------At4g35610 -TOE1(1)         <---------DEAR3(1)       <---------WRKY12                          --------->At4g35610 ->AtSPL3      ----------->HVH21   <----------ARF1            <-----------HVH21     ------->TEIL    < -->SPL14<---------GLK1(2)   --------->At4g35610<---------CCA1(2)                <---------REM1(1) <-   tcgaatatctagattgttcgacggcgatgggagctgggagagaagtcagcgtatcgctagatggagtcagagacaaaaacttgatgcagcttaagatact  3619300                                                                  <-----------GT1                                                               <---------ARR14(2)                                                           <------NtERF2                                                          --------->LBD16                                                          ------>NtERF2                                                         --------->ATERF1(2)                                                         <---------ATERF1(2)                           <----------ID1                --------->DEAR3(1) --->ANAC58               <---------------------WRI1     <---------DEAR3(1) --->ANAC58         <-------GAMYB                       <---------LBD16        <-------TEIL -ARR11(3)         --------->MYB52(2)                   --------->ATERF1(1) <---------MYB46(3) >ARR11(3)         <---------MYB46(3)                  ------>NtERF2        <------MYB83 -ARR14(2)         ----------->GT1                     --------->ZAT2   --------->ZAT2 -GLK1(2)         <-------TEIL  --------->ANAC58      ----------->HVH21------>MYB46(1) >ARR14(2)    --------->LBD16   --------->ANAC58    --------->At4g35610------>MYB83          <------- >ARR10      <---------LBD16------->GAMYB --------->DEAR3(1)   --------->ARR14(2) ---------->ID1 ---------ALFIN1 <---------MYB52(1)     ------>NtERF2 --------->DEAR3(1)<---------ZAT2       <------- --------REM1(2)<---------MYB52(1)     --------->ANAC46<---------ATERF1(1)  <------MYB46(1)  --------   caacacggttttgttcccggttcgttacaacgacaagtactacgccgatgcaatcgctgccggcgaattcaccaagcttggttcgtcttcttcttacttg  3619400                                                                    <----------DOF2                                                                <-------MYC2              ------->TEIL                                                                <-------PIF4           <---------HSFB2a(1)                                                                ------->PIF5          ---------->TaMYB80                                                                ------->MYC4          <---------KAN4(2)                                                                <-------PIF5      --------->LBD16                              --------->LBD16                   ------->MYC2     <---------LBD16   --------->TOE2(3)     <----------DOF2                        ------->PIF4     --------->ANAC46 --ANAC58               <---------ANAC58            --------->TOE2(3)    <---------YAB1--------->HSFB2a(1) --ANAC58               <---------ANAC58    <----------DOF2     <-------MYC3    <---------LBD16 ->ANAC55(2)        <----------DOF2      ------>ZmHOX2a(1)      ------->MYC3 <-----------HVH21      -   atttttcttaatttctgtctctctttgctttccccagtaattcctgcttaaatttcttaatgggcatgtgctattacgatttcacgggaatgtgcctctg  3619500                                                                                                   --                                                                                                <----                                                                                               <-----                                                                                        =============                                                                                        <----------DOF2                                                                                        <------------                                                                                        -------------                                                                                       <-------------                                                                                       <-------------                                                                                       <-------------                                                                                       <-------------                                                                                       --------------                                                                                      ---------------                                                        ----------->RAV1(2)           <--------------                                                      <-----------GT1                 ===============                                                  <----------DOF2                     ---------------            <-------TEIL                  <---------GLK1(1)                         ---------->ID1--- -------->YAB1                            --------->GLK1(1)                       <---------MYB46(3)   aatcagaactaaaattcatcgaattttggtatttttgctctcagatttctgtctttttacctgagcgagcattagtagtcgagtttgttcctttaatagg  3619600      <---------ANAC58      <---------ANAC58 ------->DAG2 --ZmHOX2a(1) -----ID1 ====================================================================MADS_MADS ---AGL15 -->AGL15                                                                                        <--- ----AG<----------DOF2                                  <---------REM1(2)                      <----- ----AGL1                                            <---------------AGL15                   <------- ----AGL3                                           --------->ANAC46                         <------- --AGL15                                         --------->ARR14(2)   <----------DOF2        <-------GAMYB ->AGL15                                      <------MYB83---------->DOF2                   <-------- -->AGL3             --------->YAB1           <------MYB46(1)        <---------DAG2        <---------AtMYB61 ---AGL3    <---------ANAC46               <---------ANAC58    <---------------AtSPL8     <---------MYB52(1) ====================================================================MADS_MADS           <----------DOF2 -->AGL2 --------->ALFIN1        <---------ANAC46--------->ZAT14   ------->TEIL     <----------DOF2 ------->DOF2       <---------YAB1         <---------ANAC58   ---------->DOF2    ------>ZmHOX2a(1)   aaaagtttgctttggggggtttatgatgaactgttctgtgattaggcttggtatactctacaaagaaagtaccttttgcaatcctgctttcctttggttg  3619700  Previous    Next  AGI:  At5g11330.1    Description:  monooxygenase family protein. similar to CTF2B, monooxygenase [Arabidopsis thaliana] (TAIR:AT2G29720.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44155.1); contains InterPro domain Aromatic-ring hydroxylase; (InterPro:IPR003042); contains InterPro domain Monooxygenase, FAD-binding; (InterPro:IPR002938) Range:  from: 3617216    to: 3618898    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g11340.1    Description:  GCN5-related N-acetyltransferase (GNAT) family protein. similar to GCN5-related N-acetyltransferase (GNAT) family protein [Arabidopsis thaliana] (TAIR:AT5G16800.2); similar to GCN5-related N-acetyltransferase (GNAT) family protein [Arabidopsis thaliana] (TAIR:AT5G16800.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN65722.1); contains InterPro domain Acyl-CoA N-acyltransferase (InterPro:IPR016181); contains InterPro domain GCN5-related N-acetyltransferase; (InterPro:IPR000182) Range:  from: 3619156    to: 3621302    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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