AthaMap

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Position

Exon region

Intron region

UTR region

AGI

% Restriction to highly conserved TF binding sites (0-100)

1 10 20 30 40 50 60 70 80 90 100
--------->YAB1 ------->MYC3 <-------MYC3 <---------TGA1a --------->ANAC58 --------->TGA1a --------->ANAC58 --------->ANAC46 <---------O2 --------->O2 --------->ANAC55(1) <---------ALFIN1 ---------->DOF2 --------->ANAC46 ------>ZmHOX2a(1) <---------ZAT14 <----------DOF2 --------->ZAT14 --------->TOE2(3) <---------ZAT18 <---------ARR11(3) --------->ZAT18 --------->AHL20(2) --------->ARR11(3) <---------ANAC55(2) <---------------AtSPL8 --------->WRKY18(1)
gcattgttcttcatagcaaaaatcctttaaaagaccgattacttaaacaaacaatgagccatagagtacacacacgtttcataaaatccagtcaaacaga	3604900
--------->ANAC58 <-------- --------->ANAC58 <---------ARR14(2) -- <---------ANAC58 ------>MYB46(1) ---------->DOF2 ------>ZmHOX2a(2) <---------ANAC58 ------>MYB83 <----------ID1 <-- <------ZmHOX2a(2) <---------YAB1 --------->ANAC46 ----------->GT1 <------ZmHOX2a(1) --------->ARR11(3) --------->ATHB12 <---------ARR14(2) <---------------------WRI1 <---------ARR11(3) <---------ATHB12 --------->ARR14(2)---------->DOF2 ==========
taagaacgatctcaacaatttcaatttcccagtgattagccatgcttgaagaacaaatacgcagaaaccaaatacaagcggaaacaacaaagaggaatcg	3605000
--------->At4g35610 --- -ARR14(2) --------->YAB1 ----- ------->YAB1 <------ZmHOX2a(2) ----- ----ZmHOX2a(2) --------->At4g35610 <--------- ====HOX2a_HOX2a <------ZmHOX2a(2) <---------YAB1 <------ZmHOX2a(2) -----
atcatctcaatcgaagaccaaaaaacattcgctagagagatcgattagactaaaatccaaactactattagctccgatcgatcaaaacgcagagcaacaa	3605100
<---------YAB1 --------->YAB1 --------->ICU4 <---------YAB1 <---------YAB1 ------>TOE1(2) <---------TGA1a ---->ANAC58 --------->GLK1(2) --------->TGA1a < ---->ANAC46 <---------ARR14(2) <---------At4g35610 --- -ID1 <---------GLK1(2)<------ZmHOX2a(1) --------->ALFIN1 --------->MYB46(3) --- ---->ANAC58 --------->ARR14(2) --------->At4g35610 ----------->RAV1(2) <----
gctacgattcagagaatcggtaatcaaacaggaaattgtgagcagacgagaggtgatgatgatacctggctcaacaaataggtttatgagtttgtgaagg	3605200
<---------ANAC46 <------NtERF2 --- --------->At5g28300 <---------MYB46(3) <-- <------NtERF2 --------->ALFIN1 --- <---------ANAC46 --------->LBD16 <------MYB46(1) ----- ----------DOF2 --------->HSFB2a(1) --------->MYB111(1) <----- ------>At4g35610 <---------HSFB2a(1) <---------AtMYB61 -------- ------>GLK1(1) --------->ANAC58 *TSS--------->ALFIN1 --------->At4g35610 --ZmHOX2a(1) --------->At4g35610 --------->ANAC58 --------->ALFIN1 <------MYB83 <---------At4g35610
agctctaatggcggtaagagaagctcaaggagagaagagaacgctccagagagagagagagtgttgaaatatgtgtaggtgggggagagagcggagagga	3605300
<---- <---- <----- ====== <----- <----- <----- <----- <--------- <---------ZAT6 --------->GLK1(2) <---------------AtSPL8 <---------ARR11(3) --------->DAG2 --------->CCA1(2) --------->CCA1(1) ------>ALFIN1 --------->DAG2 <---------AHL20(2) --------->RVE1(1) -------ANAC46 ====================================================================================== ------>ATERF1(1) ---------->DOF2 <---------RVE1(1) --------->AHL20(2)----- ---->ALFIN1 <---------------AGL15 <---------ARR14(2) <---------AHL20(2)<---- -ZmHOX2a(1) <-----------------AGL1 <---------GLK1(2) --------->AHL20(2)<----- ->ALFIN1 ----------->HVH21 --------->ARR14(2) --------->AHL20(2)--------->ARR11(3)
gcgggggaagcgactgactgaaaaaggtactgtttgaaattcggatttttttggatataacaaaaaaaaaaaatcggaatttaaaaaatctttctttgct	3605400
<---------ARR11(3) --------->GLK1(2) ------DOF2 -----DAG2 ------------AGL1 ------->GAMYB ====================================================================================MADS_MADS ------------AGL3 <------------AtMYB77 ------------AG --------->ATHB12 --------->ANAC58 ----ANAC58 <---------ICU4 <---------------AGL15 <-- ------------AGL2 ----------->GT1 <---------YAB1 <---------At4g35610 -DOF2 --------->ARR11(3) <---------AHL20(2) <-----------GT1 --------->At4g35610 ============MADS_MADS --------->AHL20(2) --------->ANAC46 <---------ZAT18 <- ---------->AGL15 ----------->GT1 --------->ICU4 <------MYB46(1) --------->ANAC46 ------ -----------AGL15 <----------DOF2 --------->YAB1 <------MYB83 --------------->AGL15 <----- ----ANAC58 <---------ARR11(3) --------->ICU4 --------->MYB59 --------->ANAC58 <-------
ttttttggaaaaatcttcaatttctttggtaaaaaattgtaagaatgatttctataatttggtccaagttactatacaaggaatagtgcaactgtctttt	3605500
--------->WOX13(1) <-----------HVH21 --------->YAB1 -------YAB1 --------->At4g35610 ----------->GT1 ----------GT1 <---------ZAT2 <---------TOE1(3) --------->ZAT6 --->AHL20(2) --------->ZAT2 ----------->GT1 --------->ZAT14 ----AHL20(2) <---------At4g35610 --------->DAG2 <---------TOE2(3) --------->ZAT18 ---DOF2 <-----------RAV1(1) ---------->DOF2 <---------YAB1 <---------ZAT14
attactacacatatgttggagctgtcaattaacaaaaaaaagtttatatgttatggtaatttgtttgttttttaagaactacactacttcgatagataga	3605600
--------->TOE2(3) --------->ANAC58 <---------ANAC55(2) --------->ANAC58 <---------ANAC55(1) ----------->GT1 --------->ANAC55(2) <---------HSFC1(2) <---------ANAC46 <---------HSFB2a(1) <---------DAG2 --------->HSFB2a(1) <-----------GT1 --------->HSFB2a(2) <---------AHL20(2) <---------HSFB2a(2) <---------YAB1 <---------AHL20(2) <---------ICU4 --------->YAB1 --------->AHL20(2) -------->ATHB1 --------->AHL20(2)<---------AHL20(2)--------->AHL20(1) --------->ATHB12 --------------->AGL15 <---------AHL20(1) <----- --------->ATHB51 ========================================================================= <---------ATHB51 <---------------AGL15 --------->ARR11(3) <----- <---------AHL20(2) --------->YAB1 <---------YAB1 <---------ARR11(3) --------->At5g28300 --------->AHL20(2) <---------ETT(1) --------->ICU4 --------->AHL20(2) ----------->GT1 --------->ICU4 --------->HSFC1(2) ----------->GT1 --------->AHL20(2) <---------At5g28300
caaattattggtcgagaaatttccgacaaacataaaatggtaatgactattattttgaaaacaaaaaatatatttaccttacgtaaattacagtaatttc	3605700
--------->ANAC46 <xxxxxxxxxxxxxxxxxxxxxxx smallRNA(si3) xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2) <xxxxxxxxxxxxxxxxxxxxxxx smallRNA(se3) <---------SPL7 <---------LBD16 <-----------GT1 <---------YAB1 <---------YAB1 --------->TOE2(3) <xxxxxxxxxxxxxxxxxxxxxxx smallRNA(i2) <---------YAB1 <---------GLK1(2)<-----------GT1 --------->YAB1 --------->YAB1 <---------AHL20(2)--------->SPL7 <xxxxxxxxxxxxxxxxxxxxxxx smallRNA(si3) --------->ANAC58 --------->AHL20(2) <xxxxxxxxxxxxxxxxxxxxxxx smallRNA(se3) --------->ANAC58 --------->AHL20(1) --------------->AtSPL8 -------->P ----------->GT1 <---------AHL20(2) --------------->AtSPL3 ------->TEIL ------------AGL1 --------->TOE2(3) <-----------GT1 <xxxxxxxxxxxxxxxxxxxxxxx smallRNA(si3) ============MADS_MADS <---------AHL20(1) <---------------AtSPL3 <---------CCA1(2) <----- ------------AG <-------TEIL --------->AHL20(2)--------->GLK1(2)<---------At5g28300 --------->ANAC55(2)
taatttggaaacgaaaatacattaatagacattatatttacattaaacgattctgtacgatattatcaccgcaatgtatctaccatcattcacgttttta	3605800

AGI:	At5g11300.1
Description:	CYC3B (MITOTIC-LIKE CYCLIN 3B FROM ARABIDOPSIS); cyclin-dependent protein kinase regulator. Identical to Cyclin-A2-2 (CYCA2-2) [Arabidopsis Thaliana] (GB:Q147G5;GB:Q39073;GB:Q9LFM7); similar to CYCA2,1 (CYCLIN A2,1), cyclin-dependent protein kinase regulator [Arabidopsis thaliana] (TAIR:AT5G25380.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44116.1); contains InterPro domain G2/mitotic-specific cyclin A (InterPro:IPR015453); contains InterPro domain Cyclin (InterPro:IPR006670); contains InterPro domain Cyclin-related (InterPro:IPR013763); contains InterPro domain Cyclin, A/B/D/E (InterPro:IPR014400); contains InterPro domai
Range:	from: 3601518	to: 3605266	Orientation: Reverse
Links:	TAIR MIPS

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