Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                  ----------->RAV1(1)                                               --------->ANAC46                                     <                                         <---------GLK1(2)  --------->ANAC58                       <-                <---------WRKY18(1)      <---------ICU4     --------->ANAC58            ------>ZmHOX2a(1) -->GT1         <-----------GT1       --------->YAB1 --------->ARR14(2)        --------->YAB1      --   aatatggccatcacagtttgaccatactcttctctgcatttcataatctccaccagttcgtcaagacaccattttgaagaagcatagttcctagagagca  3591600                                          <------ZmHOX2a(1)                                    --------->At4g35610          --------->TOE2(3)   <------NtERF2   <---------WOX13(1)         --------->At4g35610           <----------DOF2          <---------ANAC58 <---------ICU4               --------->LBD16             ------>ZmHOX2a(1)          <---------ANAC46 ---------YAB1               ----------->RAV1(1)   --------->ARR14(2)         --------->MYB46(3) --------ARR11(3)           <---------LBD16        <---------ARR14(2)     <---------YAB1      <------ ------->ARR11(3)           --------->ZAT18        <---------GLK1(2)   --------->ICU4<---------ANAC58   agataattgctatcttagaccctctaatagcccgcagaagctcaggaccgatggattctcctcttttaatctcattatcaacgaatggagtgattcccat  3591700                                                          --------->TOE1(2)                                                         --------->ZAT2                                                         <---------ZAT2                                                         --------->At4g35610                                                         <---------At4g35610                                                     ----------->HVH21                                                    <----------CDC5                                                   <---------At4g35610                                                   --------->At4g35610              <-------TEIL                                                   ----------->RAV1(2)           --------->At4g35610                                                  --------->ANAC46               <---------At4g35610                           ---------->DOF2       <---------LBD16         <---------ANAC46           <---------At4g35610            --------->ARR11(3)             <---------ANAC58           --------->At4g35610            <---------ARR11(3)   ---------->DOF2 <---------HSFB2a(2) ---------AGL15    ----------->HVH21<---------LBD16--------->LBD16       <---------ANAC58          --   tctttgaaactccatctgaatgtgactgagaaagtctctacggacatcttccccgctgaagctgggaaagacttggtgtgtccagatgcaagacgaagaa  3591800                                                                                      --------->At4g35610                                                                                      <---------At4g35610                                                                                     --------->GLK1(2)                                                                               --------->ATHB12                 <----------ID1                                               --------->ICU4           <---------REM1(1)                    ---------->DOF2             --------->YAB1        --------->ICU4                     <------ZmHOX2a(1)                <---------ICU4     <---------ARR14(2)               <---------REM1(1)                    --------->ICU4           -     --------->ARR14(2)            --------->ICU4                   <----------DOF2 <---------GLK1(2)    <------ZmHOX2a(1)---------->DOF2  <---------YAB1           <----------DOF2<---------YAB1     ---- ------->ALFIN1 <------ZmHOX2a(1)<---------At4g35610    --------->WRKY12   <---------YAB1        <---   ggtggaggaactgatgaaggagacaaagaagatggagatgatgaaggagataaagaagttgacttcttttctttgttatcatgatggaatctgagttttc  3591900                                        <------ZmHOX2a(1)                                       ----------->GT1     --------->AHL20(2)                                    <--------P      --------->ANAC58    ----------->GT1         ----------->RAV1(1)     --------->ANAC58   <------ZmHOX2a(2)           <-  --------->DAG2       <---------At4g35610        ---------->DOF2    <------ZmHOX2a(1)             <- --------->DOF2        <---------ZAT2 --------->ANAC58     <---------AHL20(2)              <---------CCA1(2) ----------->AGL15     --------->ZAT2 --------->ANAC58    --------->AHL20(2)  <-----------GT1  <----- ------------AGL15     --------->At4g35610    <----------ID1       <---------TOE1(2)     <---------CCA1(2)   tcaaaagggtgaagaagcctattgcagctgcaacagtggtaaggaaaaacgaagaagccataaaattagtaggatcagtatcacagttttcttatctctt  3592000                                                                       <---------WRKY18(1)                                                                    <------------CBF       <---------WRKY38(1)            --------->ETT(2)--------->WRKY38(1)       <---------WRKY12               <---------ETT(2)--------->WRKY12--------->WRKY12 --------ANAC58          ---------->DOF2  ----------->GT1  ------------>CBF --------ANAC58       <----------DOF2 <---------ZAT14 --------->WRKY45--------->WRKY38(1)           < -----DOF2  <-----------HVH21         --------->ZAT14--------->DOF5.7(2)                      <------   ttcttgcagtcaactatcacagagctttaaagaggctctgtatacagtgaaaaacgttgactccaatctccattgactgagaatgttgaaactattacat  3592100                                                                                       <---------TOE2(3)                                                                                      --------->YAB1                                                                          <---------HSFC1(2)            --------->HSFB2a(2)                                           --------->HSFB2a(1)            <---------HSFB2a(2)                                           <---------HSFB2a(1)           <---------LBD16                                    <---------STY1(2)       <---------ICU4         --------->GLK1(2)                                    --------->STY1(2)      <---------ATHB51        <---------GLK1(2)                                    --------->ANAC58        <---------ATHB12  --------->ANAC46                                           --------->ANAC58    ------------>CBF -----------GT1 <---------CCA1(1)                          <---------MYB52(2)<-------TEIL ---ANAC55(2)  <---------ARR11(3)               ------>ZmHOX2a(1)         --------->HSFC1(2)---------   atataccccaaattctggatatttctcacagaaaattacaagaacgggtcctacatgagcaactagcaagagaagaagcttcgttcaataatgtttcaat  3592200                                                   --------->MYB52(1)                    --------->ANAC58                                               --------->ANAC58                          --------->ANAC46                                        --------->YAB1                           --------->YAB1                                    <---------AHL20(2)       ----------->GT1   --------->ANAC58                                   --------->AHL20(2)     ---------->DOF2      --------->ANAC58    -- --->CBF       ------->GAMYB--------->AHL20(2) --------->ANAC58       <-----------GT1    --------->ANAC58   agcaaaatgaggtccaacgaaaaaaaaaaactaaatataaaatcataagaagcaaacagcaaaaggaaaatttaacctcacaagcataaacaagacacag  3592300                                                             <---------MYB46(3)                                                           <---------ANAC58                                                           <---------ANAC58                      <---------ARR11(3)              --------->ATHB12             ---------->DOF2                         <---------YAB1          --------->At5g28300                   --------->ARR11(3)                  ---------->DOF2         ----------->GT1                        <---------ARR11(3)     <---------YAB1      ------------------------>ANAC81          <------ZmHOX2a(1)    --------->GLK1(2)   --------->ANAC58   --------->ARR11(3) --------->YAB1   <---------MYB46(3)       <------ZmHOX2a(1)   --------->ANAC58  --------->YAB1 <XXXXXXXXXXXXXXXXXXXXMIR172A/B --------->ARR11(3) --------->GT1    ---------->DOF2   <XXXXXXXXXXXXXXXXXXXXMIR172E   <---------ARR11(3)         <------   aatgtaagaaacagtaaaaggaaagataatgtagaatgtagaatcataaggatttttcattggttgtgagattttgattctaagaggaaagcagcaacta  3592400                                                                                                   <-                                                                                                   <-                                         --------->GLK1(1)                           <----------DOF2<                    ---------->DOF2<-----------ARR10                           ------>ZmHOX2a(1)   --                  --------->ANAC58 --------->GLK1(2)                       --------->ANAC46     -----          --------->AHL20(2)       --------->ARR14(2)                   <---------ZAT18        ------        <---------ARR11(3)     --------->YAB1             <---------ICU4--------->ZAT14      <------- ---MYB52(2)      --------->ANAC58 <---------ARR11(3)--------->AHL20(2) <---------ZAT14    <---------   aaaaactcaagataaatttcaagaaagcattgatcaaaatctgagttccatgacttaaaatacttacattgctgttcactcctcaagctttctctttgtc  3592500  Previous    Next  AGI:  At5g11250.1    Description:  disease resistance protein (TIR-NBS-LRR class), putative. similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT5G44510.1); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT3G25510.1); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT2G14080.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO70119.1); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR000157); contains InterPro domain NB-ARC; (InterPr Range:  from: 3587979    to: 3591961    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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