Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                 <---------YAB1             --------->YAB1                                       --------->YAB1               ------>NtERF2         <---------WRKY18(1)           <---------ICU4           --------->ANAC46 ----------DOF2                       <---------ATHB51         --------->SPL7 ------>At4g35610           --------->YAB1  ------->TEIL     <---------SPL7                       <-- -------At4g35610          <---------YAB1<---------YAB1 <---------At4g35610    ------->TEIL    ------ -------ZAT2     <---------At4g35610  --------->ICU4    --------->At4g35610<---------TOE2(3)   ------   agctttgtgtttgactgtctgatgatgttatcatcaaacaattatgaatatgttagtcagcatcatacggctccattaatgaacatttgatgatgccaag  3582100                                                       <------MYB83                                                       <------MYB46(1)      <----------DOF2                                  <---------MYB46(3)         ------>MYB83-------    ------>ZmHOX2a(1)                                 --------->ALFIN1            ------>MYB46(1) ---------GT1                                         <---------AtMYB61     ---------->DOF2  -------- --->ANAC58   <---------ANAC55(2)             <---------YAB1              ------>ZmHOX2a(1)  <------- --->ANAC58   --------->ANAC55(2)           --------->YAB1     <---------ALFIN1--------->DEAR3(2)   ttactcctctttagtcacatattgttttcatttcatttagcaccaaaaattatagggtggttctcacacattgttcctaaaaccgactgtgtcttccaga  3582200                                                                                            ---------                                                                                           ----------                                                        --------->ANAC58                 <---------At4g35610                                                    ------>MYB46(1)                      --------->At4g35610                              <---------ANAC58      ------>MYB83                        ------->GAMYB                      <-----------GT1             <---------MYB59            --------->GLK1(2) -->LBD16 <-----------GT1     <---------ANAC58 <-----------GT1               <-----------ARR10     -- ->HSFB2a(2)      <---------ARR11(3)       --------->YAB1              <------NtERF2   --------->MYB46(3) --HSFB2a(2)      --------->ARR11(3)------>ZmHOX2a(1)   --------->ANAC58    <---------GLK1(2)   <----   gactgtgagttatttccaaacatcttacaatttcgttcctgccaaaaataaaccaaactagcaattggaaggccgagagaatctcatcaacagcagcaca  3582300                                                                                --------->ALFIN1                                                                              <-----------RAV1(1)                                                                            <---------ICU4                       ----------->GT1      ----------->GT1                 --------->YAB1 >At4g35610           --------->LBD16      --------->DAG2                  <---------ATHB12<---------AHL20(2) ->RAV1(1)<----------DOF2      --------->AHL20(2)                          --------->ICU4 --------->AHL20(2) ----->GAMYB         --------->LBD16      ---------->DOF2        ----------->HVH21   <----------DOF2 -----ALFIN1        <---------LBD16 ----------->GT1     ---------->DOF2  --------->YAB1   <---------AHL20(2)   actccctaattccttttgctctccagggaaaaaaaaaatagtcaaaaagttataacaaaaaagagaagtgacgactaataatgtgggctttattaaatga  3582400                                                                            ------>ZmHOX2a(1)                                                                           <---------MYB59                                                                         ---------->ID1                                                       <-----------------AGL3                                                       <-----------------AGL2      <---------MYB52(2)         <---------TOE2(3)<---------MYB52(1)    <-----------GT1   <---------ZAT18    --------->YAB1             <-------GAMYB   <---------ANAC46                 <--   --------->ZAT18   --------->ICU4             ----------->GT1 ---------->ID1               <-------GAMYB   ataagcccactaactatttggcaatgttgatgaccaaggttttataaggcccgttaatctatatttggcgcatttttcctaatccttgtaatttctgttg  3582500                      <---------AHL20(2)                      --------->AHL20(2)                      --------->AHL20(1)                  <--------HAHB4                  -------->HAHB4                  --------->ATHB51                  <--------ATHB1                  --------->YAB1                  <---------ICU4                 <---------YAB1                 <---------ATHB51                 --------->ICU4               --------->YAB1             --------->LBD16            --------->ANAC58            --------->ANAC55(1)            --------->ANAC46            <---------ANAC55(2)           <---------DAG2            --------->ANAC55(2)       ------>MYB83            --------->ANAC58          ------>MYB46(1)       ---------->DOF2<---------AHL20(1)  <----------DOF2    --------->TOE2(3)<---------AHL20(2)  *TSS  <---------AHL20(2) --------->AHL20(2) --------------------->WRI1                            ------- -------YAB1----------->GT1           -------->P        <---------MYB52(1) ----------->GT1    -------   ataattcattaaacccgtaataattaaatttgactaatccaacccttttcgcttcgccgttttgaaacttcagaaaacagaaaaacctctcaaaaaccct  3582600                            ----------->HVH21                          ======================RAV                          ----------->RAV1(2)                        --------->ANAC58                        --------->DEAR3(1)                        --------->ANAC58                       --------->ATERF1(1)                      <---------ATERF1(1)                      --------->MYB52(1)                     ----------->HVH21                    --------->DEAR3(1)                     <---------DEAR3(1)                  <------NtERF2                    ------>NtERF2                       ------>NtERF2                --------->At4g35610                    --------->LBD16                    <---------ALFIN1              <---------At4g35610                  <---------LBD16                    ------>NtERF2                   --------->ZAT2         <<<<<<<<<TBF1------>NtERF2                  --------->LBD16                 <---------ZAT2    <----------DOF2 <------NtERF2                   --------->ANAC58          --------->LBD16   <---------ANAC58--------->DEAR3(1)               --------->ANAC46          ------>ZmHOX2a(1)   <---------ANAC58--------->ANAC46  <-----------HVH21--------->MYB46(3)    ----------->RAV1(2) -->TOE1(3)     --------->ANAC46    <-----------RAV1(1)--------->DEAR3(1)<---------At4g35610    <---- -->TOE2(3) <<<<<<<<<TBF1------>NtERF2              --------->ANAC58   <-----------GT1      ---------   aatttgctttcttcttcttcgccgcgacgcctgactctctgtcgctcttctcttccgccaccgtctaactgattcacctcctgggcaagctgaagaaagt  3582700                                                                                                    -                                                                                                   --                                         <---------ANAC46                                       <----                                         <---------ANAC58                                       <----                                         <---------ANAC58                                       -----                                     <---------At4g35610                                       ------                                     --------->At4g35610                                       ------                                    --------->MYB46(2)                                         <-----                                    <---------MYB46(3)                                         ------                                    --------->MYB52(2)                                         ------                                    --------->MYB111(1)                                        <-----                                  <--------P                                                  <------  <----------DOF2                 <---------MYB52(1)                                          <------ -----------AtSPL8              ----------->GT1                                              <-------GAMYB ->DOF2             ------>ZmHOX2a(1)<-------GAMYB                                     --------->ATHB12   tgtactttgaagcctgcttctccttcgattagtctggttagttgcctgtttttgttattctctaagtgttgaattagattgtttttgagcgattgggttg  3582800 -------->DAG2 -------->DOF2 --MYB46(1)                <---------GLK1(1) --MYB83                   --------->GLK1(1) ------>GT1               --------->ARR11(3) --->MYB111(1)            <---------ARR11(3)                                               <---------ANAC58 --->MYB111(2)            --------->ARR14(2)                                               <---------ANAC58 ----AtMYB61              <---------ARR14(2)                                           <-------GAMYB --->MYB46(2)            --------->HSFB2a(1)                             <---------CCA1(2) <---------ANAC46 --->MYB59  <---------ARR14(2)                                       <---------ARR11(3)<---------ANAC58 ----MYB46(3)     ---------->DOF2                                 <---------HSFB2a(2)  <---------ANAC58 --P   <---------TOE1(2) <---------HSFB2a(1)                      ------>ZmHOX2a(1)   <---------MYB46(3) ---MYB55(1)--------->ARR14(2)      --------->At4g35610           --------->HSFB2a(2)<---------AtMYB61   gtaaagtcgcagcatttcttcaaaggaagatttccatgagctagaagacacttacatccacttatttcctagaccttatctcgagttttggttgtgtgtt  3582900                                            --------->ICU4                                          ---------->DOF2                                       --------->LBD16               >>>>>>>>>ARR2          <---------LBD16            <---------TOE2(3)             <---------AHL20(2)      <---------LBD16            ---------->DOF2            <---------ZAT18             <---------YAB1    --------->AHL20(2)          --------->ICU4                  --------->ZAT14    <------ZmHOX2a(1)         <---------AHL20(2)      ----------->GT1                      <---------ZAT14  --------->ANAC58            <---------ATHB51        <------MYB46(1)                      --------->ZAT18  <---------TOE2(3)           <---------ATHB12        <------MYB83                        ------>ZmHOX2a(1)  --------->ANAC58            --------->AHL20(2)  ------->TEIL<---------YAB1     <----------DOF2  <--   tgataaggaaggaatttgattgtatgcttcaaataattttcagggaaagatgaatttggtgaatattaaagatgtattgacttctttcagtcctgcacta  3583000  Previous    Next  AGI:  At5g11240.1    Description:  transducin family protein / WD-40 repeat family protein. similar to unnamed protein product [Vitis vinifera] (GB:CAO44842.1); contains InterPro domain WD40 repeat-like (InterPro:IPR011046); contains InterPro domain WD40/YVTN repeat-like (InterPro:IPR015943); contains InterPro domain Protein of unknown function NUC189, C-terminal (InterPro:IPR012979); contains InterPro domain WD40 repeat (InterPro:IPR001680) Range:  from: 3582541    to: 3586987    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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