Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100       --------->GLK1(1) ---------At4g35610 ---MYB46(1)    <------NtERF2 ---MYB83       <---------ANAC46 -----DEAR3(1)--------->DEAR3(1) -----AtMYB61 <---------ATERF1(2) ---->MYB111(2) ----------->RAV1(2) ---->MYB46(2)--------->RAP2.3(2) -----MYB46(3)--------->RAP2.3(3) ---->MYB111(1)------>NtERF2                                                          --------->MYB46(3) ---->MYB55(2)--------->ATERF1(2)                                                     <---------ATHB12 ----MYB55(1)--------->ORA47(2)                                                      ------>MYB83 ---P<---------GLK1(1)                                                               ------>MYB46(1) -GAMYB      --------->RAP2.3(1)                      <---------------AGL15          --------->ANAC46 ->MYB52(2)  --------->ERF1                       --------->ARR14(2)                 -------->P ---->AtMYB84--------->DEAR4(2)          --------->ANAC55(2)                ------>ZmHOX2a(2) ->MYB111(2) --------->ATERF1(1)         --------->ANAC58                 --------->ARR11(3) ->MYB55(2) <---------ATERF1(1)          --------->ANAC46                 <---------ARR11(3) --MYB46(3)--------->ANAC46              --------->ANAC58                 <---------ARR14(2) >ALFIN1   <---------DEAR3(1)     <---------MYB52(1)  --------------->AGL15<------ZmHOX2a(2)    ----- -AtMYB61 ------>ZmHOX2a(1)      --------->TOE2(3)<---------ARR14(2)      --------->ARR14(2)   <-----   ggtgctgatttcctcgccgcctgtattgaagaattcgttagagacgcaatcgaatactcaaattagataaaccctagatccccttccaaccaatttcatc  3473100                       --------->YAB1               --------->LBD16              --------->ANAC46        --------->YAB1                                      --------->GLK1(1)        --------->YAB1<-------TEIL   <------ZmHOX2a(2)                      <------ZmHOX2a(2) ---->YAB1 --------->ARR14(2)       <---------ARR11(3)                     <---------ARR11(3)<------- ----YAB1  <---------ARR14(2)       --------->ARR11(3)                     --------->ARR11(3)<-------   ataaacaaaatcaaaaccgcaagattcatactaaattagatcataaactaaaaattcaacacaatatagaaaacctagatcatatttttcagatttcgtc  3473200                                                                                               ------                                                                                               ------                                                                                               ------                                                                                              -------                                     ------>ZmHOX2a(2)                                        <------                                    <------ZmHOX2a(2)                                    --------->At4g35610                                   --------->AGP1                                     --------->At4g35610                                   <---------AGP1                                     <---------At4g35610                                   <---------ARR11(3)                                 --------->ZAT2                                   --------->ARR11(3)                                 <---------ZAT2-                                   <---------ARR14(2)               <------ZmHOX2a(1)--------->ANAC58       ----------->GT1             --------->ARR14(2)         --------->CCA1(2)      --------->ANAC58 --ANAC58         ------->GAMYB   <---------CCA1(2)      ---------->DOF2   --------->TOE2(3) -------- --ANAC58<---------MYB52(1) ------->TEIL           <---------YAB1  <----------ID1 <------NtERF2<-----   cacaaaaactcgttattcaacccaaatttgaaccctagatctactatttcggtatgaatgaaagatagaaggacaaaccttggtggcaagctgcttcctg  3473300                                          >>>>>>>>>>>>>>>>>LFY                                         --------->ANAC46                                <---------ANAC46                                <---------ANAC58  <----------DOF2               <---------ANAC58  <---------DAG2       --------->MYB52(1)--------->ANAC58 --->HSFB2a(2)   <---------GLK1(1)    --------->SPL7 >ZmHOX2a(1)     --------->GLK1(1)  <---------SPL7 --->LBD16      --------->ARR14(2) <------MYB83                      <----------DOF2 -->TOE1(2)--------->LBD16  <---------MYB52(1)                       <---------DAG2 ---LBD16<---------LBD16  <---------MYB46(3)                     ----------->HVH21                --- -------->At4g35610   ------>ZmHOX2a(1)  --------->ANAC58 ---------->DOF2                        <--- --->RAV1(2)<---------MYB52(1)  <---------AtLEC2        --------->HSFB2a(2)                   <------ ----HSFB2a(2)  <---------ARR14(2) <------MYB46(1)      <---------HSFB2a(2)                --------->GLK1(2)   ggagctttacctccggtggatttcctagcggtttgcttggtacgagccattgtttcttccaaaagatgtgacttttcgataagcttgatagagaagcttt  3473400                                                                    --------->AHL20(2)                                                                   <---------YAB1                                                                   *TSS                                                                 --------->YAB1                                                              --------->YAB1                   <-----                                        <---------ANAC46      <---------ICU4                <--------                                        <---------ANAC58     <---------YAB1                <-------GAMYB                                        <---------ANAC58     --------->ICU4               <------MYB46(1)                                   --------->ATHB12     ----------->GT1                   <------MYB83                                  <---------YAB1       --------->DAG2                     <---------DEAR3(2) ------>ATHB12                    --------->ICU4     ---------->DOF2<-----------TBP       <---------MYB46(3) ------YAB1 <------ZmHOX2a(1)<---------ANAC58    ----------->GT1--------->ICU4            ----------- ----DOF2<---------LBD16     <---------ANAC58    --------->YAB1 <---------YAB1          <------------   tgatttgattatcaggaagcgagttttgttttcttgatgattgtgtgggaatagtaaaaggtgattatgattatataggtgaatgttttagtcggttaat  3473500                                                                                 ------>ZmHOX2a(2)                                                                                 ===============HOX2a_HOX2a                                                                                <------ZmHOX2a(2)                                                                                ================HOX2a_HOX2a                                                                               --------->ARR14(2)                                                                               <---------ARR14(2)                                                       <---------YAB1       <------NtERF2                                               <-------TEIL               <---------DEAR3(1)                                              --------->ARR14(1)       --------->TGA1a                                              --------->CCA1(2)        <---------bZIP60(2)                                             <---------ARR14(2)        <---------O2                <-                                             <---------GLK1(2)         <---------ANAC46          ----  <------ZmHOX2a(1)    <---------ICU4        --------->ARR14(2)        <---------TGA1a          <---- ----YAB1              --------->YAB1        --------->ARR11(1)       <---------TOE2(3)       <------ -MYB52(1)            <---------ATHB12     ----------->ARR10        ----------->TGA1     ------>ZmHOX2a(1) >GT1             ------------>CBF         --------->ICU4       <---------ARR14(2)  <---------ANAC58 ---------WRI1--------->ALFIN1          --------->WRKY18(1)     --------->ARR14(2)  <---------ANAC58   attaggaaatacagaagtggtccaatcttcacattttcgacggtcaagattcgacttatgagagcgaatactgacgttggcgatctgcgtcctcgcttct  3473600                               <---------ANAC58                               <---------ANAC58                          <---------ANAC58                          ===============================bZIP_DOF                          --------->TGA1a                          <---------O2                          <---------ANAC58                          <---------ANAC46                          <---------ANAC55(2)                          --------->ANAC55(2)                          --------->O2                          <---------TGA1a                          <---------bZIP60(2)                          --------->bZIP60(1)                          <---------bZIP60(1)                         ----------->STF1                         ----------->bZIP910(1) <------MYB46(1)        <---------TGA2(2) ----------->GT1       ----------->TGA1                                                           --- <------MYB83          ----------->HVH21                    <---------ANAC58           <------MYB83-- --------WOX13(1)   ------>ZmHOX2a(2)                       <---------ANAC58          --------->MYB59 ----->ATHB12     <---------ARR14(2)                       ---------->ID1  <---------YAB1       ----- -----YAB1        --------->ARR14(2)          <----------DOF2            <-----------GT1   ---------- ---At4g35610    <------ZmHOX2a(1)    <---------ANAC46 <---------MYB52(1)--------->YAB1<------MYB46(1)   gattggtttaatcttgggaggatcgatgacgtggctagttttgtgtttcttttctacgtttgtcgtttgaagtaatcacgattttagttgggttagaaaa  3473700                                                                               <---------ANAC58                                                                               <------MYB46(1)                                                                               <------MYB83                                                                  <------ZmHOX2a(1)     --------->YAB1       <------MYB46(1)                         <---------------AtSPL8    ----------->TGA1      ----------->GT1                        <------MYB83  <---------ANAC58    --------->ICU4        <------MYB83 --------->ATHB12          <------MYB46(1)  <-------TEIL ------>DAG2             --------->MYB59              <---------ARR14(2)      <---------MYB46(3) --------->GT1           --------->MYB46(2)    <------NtERF2   <--------P   <---------MYB52(1) ----->DOF2     ------>ZmHOX2a(2)     <---------YAB1  --------->ARR14(2)   <-------GAMYB          --- ->GT1 <---------YAB1 --------->ATHB12--------->ICU4 <---------CCA1(2)    <---------ANAC46--------->MYB52(1)   aaggtaatgacgatttgatctacatgtttggtaattagcgatgatgggccgagtcgtatcccttggtaggagtactgcgttgggttcaggcccaactgat  3473800                                                           <------NtERF2                                                           <---------At4g35610                                                           --------->At4g35610                                                           --------->ATERF1(1)                                                          <---------ATERF1(1)                                                   <---------SPL7                                                  <------MYB46(1)                                                  <------MYB83                                                 <---------------AtSPL3                                                 --------->MYB59                                              --------->ARR14(2)                       <---------ANAC46                                              <---------ARR14(2)                       <------MYB83                                             ------>MYB83<---------DEAR3(1)            <------MYB46(1)                                             ------>MYB46(1)                           ----------->GT1                                           <---------------AGL15                      <------MYB83                                           <---------MYB59--------->RAP2.6(2)      <---------ANAC58                                           --------------->AGL15                  <---------MYB46(3)                                          <-----------------AGL3                  --------->MYB52(2)                                          <-----------------AG                    --------->MYB55(2)                          <---------YAB1  ----------------->AG                    <------MYB83                      --------->ZAT14     ----------------->AGL1                  <------MYB46(1)                      <---------ZAT14     <-----------------AGL1     --------->LBD16  <------MYB46(1)                 --------->At4g35610      ----------------->AGL2  <------ZmHOX2a(2)<---------ANAC46                 <---------ZAT2           ----------------->AGL3 <---------ARR14(2)<-------GAMYB                 <---------At4g35610      <-----------------AGL2 --------->ARR14(2)<---------ANAC58                 --------->ZAT2      ------>ZmHOX2a(2)--------->ANAC58          <--------P               <-----------RAV1(2)  <------ZmHOX2a(2) --------->ANAC58  <---------ARR11(3)              <---------MYB52(1)   <---------ARR14(2) <---------RAP2.6(2)--------->GLK1(1)       <--- ------>DAG2 <-----------HVH21     --------->ARR14(2)--------->SPL7------>ZmHOX2a(2)<--------P  -----   aaggcattgagagttcgtcagctgtgttctgaatatcgatccgaaccaaatttggtacggccgctccgatccgagatttcaagttggttgggttaaaacc  3473900                                                      <---------YAB1                                                     --------->AHL20(2)                                                    --------->AHL20(2)                                                    <---------AHL20(2)                                                    --------->YAB1                                                 <---------ICU4                                                 --------->ATHB51                                                 <--------HAHB4  <------MYB46(1)                                                --------->ICU4   <------MYB83                                                <---------YAB1  --------->MYB46(2)                                              --------->YAB1    --------->MYB59          <---------bZIP60(2)                 <---------ICU4    <---------AtMYB61       ----------->HVH21                     <---------YAB1     --------->MYB111(1) --------HVH21                        <-----------GT1<---------AHL20(2) ---->AtMYB61              --------->YAB1--------->TOE2(3)    <---------MYB52(1)              <------   atcacatatatgacatggacatggttgaattataagtttataacctcatcataattaaaattcggtttggtattagaacatgaaaacattccagcccaac  3474000  Previous    Next  AGI:  At5g10980.1    Description:  histone H3. Identical to Histone H3.3 (HTR8) [Arabidopsis Thaliana] (GB:P59169;GB:Q6NR95); similar to histone H3.2 [Arabidopsis thaliana] (TAIR:AT4G40040.1); similar to histone H3.2 [Arabidopsis thaliana] (TAIR:AT4G40040.2); similar to histone H3.2 [Arabidopsis thaliana] (TAIR:AT4G40030.3); similar to hypothetical protein [Vitis vinifera] (GB:CAN70652.1); contains InterPro domain Histone-fold; (InterPro:IPR009072); contains InterPro domain Histone core; (InterPro:IPR007125); contains InterPro domain Histone H3; (InterPro:IPR000164) Range:  from: 3472406    to: 3473467    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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