Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100         <---------TOE2(3) --TOE1(3)                        <------MYB46(1) --TOE2(3)                        <------MYB83  <---------ANAC46 ->AGL15                         <---------AtMYB61 --AGL15                <--------ATHB1          <---------ANAC58 ---AGL3                --------->YAB1          <---------ANAC58 ---AGL2               <---------YAB1    <---------ANAC58                                           - -->AGL3               <---------ATHB51  <---------ANAC58     <---------DOF5.7(2)                  <- -->AGL1    --------->YAB1    <---------MYB46(3)<---------ANAC55(1)  <----------DOF2<---------------AtSPL8 ---AG<-----------GT1--------->YAB1   <----------DOF2       --------->DOF5.7(2)     --------------->AtSPL8   ttgtatattaacaatattaagaacaataatagtggatggtctttcgtcttgcgtgtgttatcgttcacgagctttataacttatatatggtaccaattcc  3407900                                   --------->At4g35610                                <---------ZAT2                                --------->At4g35610                                --------->ZAT2                                <---------At4g35610    <-------TEIL                               --------->MYB111(1)    --------->AtLEC2                              <--------P    ------>MYB46(1)                         <---------ICU4   <---------------AGL15           ----------->GT1 <---------YAB1 --------------->AGL15          --------->DAG2 <--------ATHB1   <---------MYB59         ---------->DOF2 --------->YAB1<---------ARR14(2)                         --------->ZAT6      --------->AHL20(2) <------------ATHB5 ------>MYB83                    <---------ARR14(2)      --------->YAB1    <---------ATHB12 ----------------->AGL3             --------->ARR14(2)  <---- -------->YAB1          <---------ATHB51 <-----------------AGL3    <---------ALFIN1        --------->AHL20(2) --------ATHB12         --------->ICU4 --------->ARR14(2)---------->DOF2    <---------GLK1(2)<-------   aataacaataaaaaagtgatatatcaataatggtagctgcagaaccaaatttagagatgcaaagtatcaacacatctagatttgccactacaatttaaca  3408000                                                                    <---------ICU4                                  <-------TEIL                      <--------HAHB4                       --------->CCA1(2)                            --------->ATHB51                      <---------ARR11(3)                         <---------ICU4                      --------->ARR11(3)               --------->ARR14(2)                      <---------ARR14(2)               <---------ARR14(2)<---------ANAC55(2)   --------->O2       --------->ARR14(2)         --------->TOE1(2) <---------YAB1 -----ICU4      <---------HSFB2a(2)              --------->TOE2(2) --------->ICU4       <-------TEIL ----GT1        --------->HSFB2a(2)     <---------ANAC46        <---------YAB1------->TEIL   atgacacatcgcatgcttcaagaagatataccaaaatacatcgtgtgtaaacctccgaattcgaacatcattattacatgaacatctaaattcgtttcat  3408100                           <-----------------AGL1                                    ------------>CBF              <---------AHL20(2)      --------->ANAC58                              <-----------GT1            <----------DOF2------->TEIL                                  ---------->DOF2      --------->ZAT14 ----------->RAV1(2)      ----------->GT1          ---------->DOF2      <---------ZAT18------->TEIL     --------->ANAC58              <-------TEIL  --------->AHL20(2)-   attagtagtagactctttaatcgaacctgtaccggtttggaagcaatagaagtaatatagactatatgggttcgtaaaggcccattaaacaatttgccaa  3408200                                                <---------LBD16                                              <---------ARR11(3)                                              --------->ARR14(2)                                              <---------ARR14(2)                                              --------->ARR11(3)                                             --------->CCA1(1)                                             --------->RVE1(1)                                  <------ZmHOX2a(2)                                               <--                                  --------->CCA1(2)                                          <-------                                 --------->ARR14(2)                     --------->CCA1(2)  <---------RVE1(1)                                 --------->AGP1 <-----------------AGL2  --------->MYB52(1) <---------CCA1(1)                                 <---------ARR14(2)          ----------->HVH21            <---------ARR11(3)                                 --------->ARR11(3)         --------->DEAR3(2)     <---------ANAC46     ---------->DOF2            --------->GLK1(1)   <---------ARR14(2) <---------ARR14(2) --------->ARR11(3) <---------ANAC46     <---------TOE2(3)  --------->AHL20(2) --------->MYB46(3)  *TSS    ----------->ARR10 -------->At4g35610 ---------->DOF2  ----------->GT1--------->ARR14(2) --------->ARR14(2) <---------GLK1(2)   gttgctgaaaagcctaatagaataaaggaaactgagatccagttaaaatatctggatttggacccgacctgaagaaacgggtttggagtgaagatttttt  3408300               <---------ICU4               --------->ATHB51               -------->ATHB1              --------->ICU4              <---------ATHB51      <---------ANAC58                                        <------ZmHOX2a(2)      <---------ANAC58                            ----------->GT1  <----------DOF2                             =======================HOX2a_HOX2a <---------ANAC58                             <------ZmHOX2a(1) <---------ANAC58                       <---------At4g35610  <---------ARR14(2) ---------GT1 <---------ATHB12          --------->At4g35610  --------->ARR14(2) --AHL20(2) --------->WOX13(1)       ---------->DOF2         --------->AGP1    --------->LBD16   ttagctttccttgtcaattattcgaattgggaaaacatctaaagctgaggagaagataaatccgatctaggtctcttcttccccaatctctctgtgtctc  3408400                                                                 <------NtERF2                                                      <------NtERF2                                                    <---------DEAR3(1)        <---------ATHB12                                                    --------->ETT(1) <---------ARR14(2)             -                                          <---------MYB46(3)   --------->DEAR3(1)                   -                                       --------->ATHB12        <---------ANAC46 --------->WOX13(1)  <                               ---------->DOF2    <-----------HVH21  --------->ARR14(2)             <               <<<<<<<<<<<<<<<<<LFY   ----------->HVH21       --------->ATERF1(1)      <---------ZAT6         ---------->DOF2 ---------->DOF2 <---------ANAC46 --------->ALFIN1    <------ZmHOX2a(2)     -   tctcgatcgaagaaagaagacaatggacaaaggcaaagcagtgatgggtactggtcggagatgggccgtcgaattctccgatcaatctactgttccatct  3408500                  --------->O2<---------TGA1a                  <---------O2======================================bZIP_DOF                  ----------->RAV1(2)               --------->MYB46(3)              <------ZmHOX2a(2)              ===================================HOX2a_HOX2a                        <---------GLK1(2)          ------>ZmHOX2a(1)   --------->TGA1a                             <-----------------AGL2     --------->bZIP60(1)      <---------ANAC58                            <---------LBD16     <---------bZIP60(1)      <---------ANAC58                            <-----------------AGL1  ----------->HVH21           ======================================bZIP_DOF <---------MYB52(1) <-----------HVH21<---------ZAT2                                        <---------ARR14(2) --------->LBD16  --------->ZAT2                                        --------->ARR14(2) -------->ANAC46<---------ALFIN1               ----------->GT1         <---------SPL7 -------->O2 --------->ARR14(2)              <-----------RAV1(2)       <---------RAP2.6(3) ---------O2 <---------ARR14(2)           <------ZmHOX2a(1)           <---------MYB46(3)          --- ---------ANAC55(2)    <---------ANAC58 <---------TOE1(2)    <----------DOF2--------->LBD16       <-- -------->ANAC55(2)    <---------ANAC58<---------LBD16   <----------DOF2<---------MYB52(1)    <------   tcccgtgacatcctcgatccacctggcttctctcgtgcctctcaggaacaggttaatttctttctttttaggccgttccggtattggattcttatatttc  3408600              <---------ARR14(2)        --------->ATHB12      --------->HSFB2a(2) --->ZmHOX2a(1) ---------RAV1(1) -----GT1     --------->ARR14(2)      <---------YAB1                                               <-   ctgttgttctcgattggattcgaggtttcaatttggaattttgactgagaattgagttgttttgctactgggatttgatgtgttatcgtttgatgagttc  3408700                          ---------->DOF2                      ---------->DOF2                   <------NtERF2                  ------>NtERF2                  --------->LBD16                  <---------RAP2.6(3)                 --------->RAP2.6(2)                 --------->ATERF1(2)                 --------->RAP2.3(2)                 <---------ATERF1(2)                 --------->ANAC46                 --------->DEAR3(1)                 --------->RAP2.3(3)                 ------->GAMYB                 --------->RRTF1(3)                 --------->RRTF1(2)                                                       <----------                 --------->DREB2C(2)                                                  --------->ARR14(2)                --------->MYB46(3)                                                    ------->TEIL                --------->ERF1                                                        <---------ARR11(1)               <---------At4g35610                                                    <---------ARR14(2)             --------->MYB46(3)                                                       <-----------ARR10           --------->MYB52(1)                    --------->HSFC1(2)                  <---------CCA1(2)        <---------At4g35610                      <---------HSFC1(2)                  <---------ARR14(1)        --------->At4g35610     --------->At4g35610  <-----------RAV1(2)      ---------->DOF2-------- <---------YAB1--------->At4g35610        <---------ANAC46               --------->ARR14(2)  <------- -----ZmHOX2a(1)--------->RAP2.3(1)   <---------At4g35610                <---------ARR14(2) ---------   aggatgattcagcaaacagccgccaaaagaaagacgctgaagctacttggaaacttcaggtatacacttatgtcaaatctgaaagtcgtatcttactcta  3408800  Previous    Next  AGI:  At5g10780.1    Description:  similar to unknown [Populus trichocarpa] (GB:ABK95804.1); contains InterPro domain Uncharacterised conserved protein UCP017207, transmembrane-p85 (InterPro:IPR016687); contains InterPro domain Protein of unknown function DUF1077 (InterPro:IPR009445) Range:  from: 3408280    to: 3410071    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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