Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                              --------->ARR14(2)                                                         <---------ANAC58                                                         <---------ANAC58                                                     <---------YAB1                                                   --------->ATHB51                                                   -------->HAHB4                                                   --------->ATHB12                                                   <---------AHL20(2)                                                   -------->ATHB1                                                   <---------ICU4                        --------->MYB52(1)        <---------ATHB12                     --------->STY1(2)            --------->ICU4                     <---------STY1(2)            <---------YAB1             --------->ANAC58                     <---------ATHB51 ------->ICU4--------->ANAC58                  --------->ICU4                       ---------->DOF2 --RAV1(1)   --------->ANAC46     <---------YAB1<---------ICU4       --------->AHL20(2)        <-----   aatttttgttaactcactcaactagctaacaaaattttgattacaactactaattattgtcgtttcccccattaaacatatactactaaagacatattta  3405000                                                                             ------>ZmHOX2a(1)                                                                   --------->TOE2(2)                                                                   --------->TOE2(3)                                                                   <---------MYB59                    --------->ARR14(2)                          <-----------GT1                    <---------ARR14(2)                       --------->YAB1 <---------------AGL15                    --------->GLK1(2)                     <---------ARR11(3)--------------->AGL15   -               ----------->GT1                            --------->ARR11(3)<---------MYB59         -    <----------DOF2 ------->TEIL                    --------->ANAC58       ----------------->AGL1---- ------GT1     ------>ZmHOX2a(1)                    --------->ANAC58       ----------------->AG  <---   ctatcgctttcttagtcctgtgaatctgtgatggtaatagtatcaactacttggaagcaagatttataacctaagtttcctaattgagagtctctattca  3405100                                                                     --------->HSFB2a(2)                                                                     <---------HSFB2a(2)         <---  <---------ANAC58                                                  <---------LBD16              <---  <---------ANAC58                                             <---------ALFIN1               <------ ------>TEIL                   --------->YAB1               <---------ICU4                    ------- ------->P ---------->DOF2   ------->TEIL                   --------->YAB1                  --------- ----->At4g35610          <---------ATHB12                 --------->ICU4                  <---------YAB1 ------At4g35610  ---------->DOF2                          <---------ATHB12---------->DOF2 --------->ICU4   tctaccttgtctataaagctaaaagacaatgaatcatatcagaaaatgaattggctaagaaatcatcacctctgggagaaagaacacaagatgatgatga  3405200                 <---------ANAC58                                                                   <                 <---------ANAC46                                                                   -                 <---------ANAC58                                                                  --            --------->ZAT2                                                                        <-- ------REM1(1)----------->HVH21                     <---------At4g35610                         ----- ------YAB1 --------->At4g35610                <---------ANAC58     ------->GAMYB              <----- ---YAB1    <---------ZAT2                     <---------ANAC58     ----------------->AGL2  <-------- -->ICU4    <---------At4g35610  --------->GLK1(2)  --------->At4g35610                   <------ZmHOX2a(1) >YAB1<------ZmHOX2a(1)      --------->YAB1 <----------DOF2<---------ICU4               <---------TOE2(3)   tgaagggaggagagagctgacttggatagtatgagaatcagtctctctttcttgagctccatcgttacaacccaaattgagacatatacaaaggattatt  3405300                                                                                           ------>ZmHOX2a(1)                                                                                           <---------                                                                                      <------MYB46(1)                                                                                      <------MYB83                                                                                     <---------AtMYB61 ---------ARR11(3)                                                                   --------->MYB59 -------->ARR11(3)                                                                   --------->MYB111(1) ------->YAB1                                                    --------->ANAC46    <---------MYB46(3) -------YAB1                                                     --------->ANAC58   <--------P ---->YAB1      ------>ZmHOX2a(1)                                --------->ANAC58 <---------MYB46(3) ----YAB1   --------->GLK1(2)                             <---------ICU4          --------->ATHB12--- -YAB1     <---------GLK1(2)   <-----------GT1            --------->YAB1    <<<<<<<<<<<<<<<<<LFY<----   atgatattcaacagattcctatttatgctcattttgctctcttaattctctccctcacaaaaatgacactcaataacatgacaatggttggtcctttata  3405400                                                    --------->WOX13(1)                                           <----------DOF2                                        <---------TOE1(3)                              --------->ANAC58    <----------DOF2                 <-------GAMYB--------->ANAC58                      --------->ANAC58  <---------ATHB12                 <---------MYB46(3)                                <---------ALFIN1 ------>MYB46(1)                   --------->MYB111(2)                              <---------ZAT18 ------>MYB83                     <--------P     --------->ANAC46        --------->ANAC58 -DOF2         --------->ANAC58  <-------GAMYB   *TSS      <---------ATHB12    --------->ALFIN1    <- ------>MYB46(3) ---------->DOF2<---------MYB46(3)------------>CBF       --------->ANAC58        <--- -------GT1    --------->ANAC58<---------AtMYB61 --------->ANAC58        --------->ANAC46       <----   accaatcttttttgctcaagaaagtctctagtggaggttgttaagctttagaagcaatccagtcatccacatatcacacaagtaggggcaccctattcca  3405500                                                  <---------YAB1                                                 <------------CBF                                                -------->ATHB1                                                --------->ATHB12                                                --------->ATHB51                                                <---------ICU4         -------->P                            --------->ICU4      <---------MYB52(2)                       <---------YAB1    <-----------GT1             --------->At4g35610                       <---------ALFIN1         --    --------->ZAT6         --------->bZIP60(2)<----------DOF2  <---------MYB52(1)               ----- --------MYB46(3)   ----------->GT1 ------------>CBF          <-------GAMYB                    ------ ------MYB52(1) --------->MYB59 <---------At4g35610          <-----------RAV1(1)       <---------At4g35610 --------CBF  <---------MYB52(1)----------->RAV1(2)  <---------YAB1   --------->AtLEC2 --------->At4g35610   ttggtttcactaaccagttagatagtgacacatcatctggcaatggagcattattgttattttctgttgtctatgcacacttcaatttcagcacaatgaa  3405600                                                  <------MYB46(1)                                                  <------MYB83                                                 --------->MYB111(1)                                                 <---------AtMYB61                                                 --------->MYB46(2)                          --------->YAB1         --------->MYB59                        <---------WOX13(1)       --------->MYB111(2)                      --------->ATHB12          <--------P                     <-------TEIL               <---------MYB55(1)      <---------ANAC46                  -------->HAHB4              <------MYB83              <---------ANAC58                  --------->ATHB12            <------MYB46(1) --------->AtLEC2                 <---------ATHB12            --------->MYB59  <---------YAB1               ------>MYB46(1)               --------->MYB46(2)         --------->ALFIN1             --------->AtMYB61               --------->MYB111(1)<---------AtLEC2             <---------MYB55(2)          --------->ATHB12   --------->YAB1 --------->GT1 ------>MYB83           <-----------------AG <---------ATHB12              <---------MYB52(1) -->TEIL    --------->ANAC46        <---------ZAT14   <------NtERF2     <---------ANAC58--------->TOE2(3) --->MYB52(1)--------->MYB46(3)     --------->ZAT14 --------->ALFIN1 ------->TEIL      ----------->GT1   cgggataatattccaccaaatgattcattgatcagtagtaaactgattaggtaggtgtcgaatcatgcatggatgtgtgtgatgctcattcgttaatttg  3405700                    --------->AHL20(2)                    -------->ATHB1                    --------->ATHB51                   --------->ICU4                   <---------ATHB12                   <---------ATHB51                                                                 -         --------->AHL20(1)                                                            <-------------         <---------AHL20(1)                  --------->YAB1--------->YAB1              --------------         <---------AHL20(2)           ------->TEIL         -------->HAHB4              <---------TOE2(3)        --------->AHL20(2)         <---------ATHB12       <---------YAB1           --------->TOE2(3)<        --------->YAB1             <---------MYB52(2)   --------->YAB1  --------->DOF5.7(2)        --        <---------AHL20(2)     --------->ZAT18         <---------YAB1  --------->TOE2(3)   ------->TEIL   cgaaacaaaattatattttcaattattcaaatgtgcaatgaacccatttataaacgtataattatagtttattcgttaacaaaaacattaatgtactctc  3405800                                                                         --------->ZAT2                                                                --------->AHL20(2)                                                             <---------ICU4         <-----------RAV1(1)                                                             --------->ATHB51      <---------TOE2(3)     <---------RVE1(1)                                       --------->ATHB12     --------->YAB1     <---------CCA1(1)                                       --------->YAB1       <---------ICU4    <---------ARR11(3)                                       <------------ATHB5  <---------ATHB12    --------->ARR11(3)     ----------->GT1                   <--------ATHB1      --------->ICU4   --------->YAB1  <---------ICU4                            -------->ATHB1      <---------ATHB51  <---------YAB1   --------->YAB1                           <---------ATHB12--------->ANAC58 -------->YAB1     -------->HAHB4                     --------->ANAC58  --------->ANAC58 <---------ANAC58 --AtSPL8         --------->ICU4                      --------->ANAC58  --------->ANAC46 <---------ANAC58 ->AtSPL8         <---------ATHB51     --------->ANAC58     <---------ATHB51--------->ANAC46 ---------ICU4    <---------ATHB12 --------->YAB1     --------->ANAC46  --------->ANAC58 <---------ANAC46 ------->ICU4  <---------------AGL15   --------->ANAC58     --------->ICU4  --------->ANAC58   cataatgatattttcgcctaataatggaagagtcaattcataagcctcatattagaacgccaataattgaataccagcaagcaataatgttgcttaaaat  3405900  Previous    Next  AGI:  At5g10770.1    Description:  chloroplast nucleoid DNA-binding protein, putative. similar to aspartyl protease family protein [Arabidopsis thaliana] (TAIR:AT5G10760.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44388.1); contains InterPro domain Peptidase aspartic, catalytic; (InterPro:IPR009007); contains InterPro domain Peptidase A1; (InterPro:IPR001461) Range:  from: 3403111    to: 3405449    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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