Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                           ------>ZmHOX2a(2)                                                                                    <----------DOF2                                                                                   <---------ANAC58                                                                                   <---------ANAC58                                                                                ------->MYC3                                                                                <-------MYC2                                                                                <-------MYC3                                                                                <-------PIF5                                                                                ------->MYC2                                                                                ------->MYC4                                                                                <-------MYC4               --------->WRKY38(1)                                              ------->PIF5               --------->WRKY45                                                 ------->PIF4               --------->WRKY12                                                 <-------PIF4              --------->DOF5.7(2)                                              <---------TGA1a             --------->At4g35610                                               --------->ANAC55(2)             <---------At4g35610                                               --------->TGA1a        <---------At4g35610                                                    <---------O2<---------ANAC46        <---------ZAT2                                                         --------->O2<---------ANAC58        --------->At4g35610   ------>NtERF2                                    ================bZIP_DOF        --------->ZAT2     --------->At4g35610                                 <---------ANAC55(2)      <--------P  <---------ANAC58                                            ------------>OsbHLH66     <---------MYB52(1)<---------ANAC58                                      <---------ALFIN1   <---------ATERF1(2) <---------ANAC58     <----------DOF2                  <------------OsbHLH66 <-  <---------LBD16 <---------ANAC58          =============================================bZIP_DOF  -- ------DOF2  <-------GAMYB <---------At4g35610   <----------DOF2            <---------REM1(2)   <---- -----DAG2  <---------ANAC46 --------->WRKY12    ========================================bZIP_DOF <-- -------->AGL3<---------MYB52(1)--------->bZIP60(1)                        <---------ALFIN1<---------ANAC58   tttagccggtagctccgttgacttggcttcgctgacttcatttgcgctattctttgacaattttgagtagatggactccacacgtgcttgatcgcgtctg  3401800                                                                  --------->ANAC46                                                                  --------->ANAC58                                                                 <-------MYC3                                                                 ------->MYC2                                                          --------->ZAT18                                                        ------->PIF5                                                        ------->MYC4                                                        <-------MYC2                                               ------->TEIL      ------->MYC3                                              --------->ANAC46   ------->PIF5                                            --------->ANAC46     <-------PIF5                                            --------->ANAC58     <-------MYC2                                            --------->ANAC58  <---------ALFIN1                                           --------->ZAT18<---------ZAT18                                           <---------ZAT18--------->ZAT14                                         <---------ZAT2 ------->PIF4       ------>NtERF2                                         --------->ZAT2 <-------MYC3   ----------->HVH21                                      <---------ANAC58  <-------PIF5   --------->DEAR3(1)     <-----------TGA1        <---------At4g35610        ------->MYC3  --------->At4g35610 --------ICU4<---------WRKY38(1) ----------->ARR10      <-------PIF4  <------NtERF2 ------->ATHB12     --------->ANAC58  <---------ANAC58  ------->MYC2  --------->DEAR3(2)         ---- -----At4g35610     --------->ANAC58--------->CCA1(2) ------->TEIL--------->ANAC58             ------ -------YAB1 --------->ETT(2)--------->At4g35610   --------->AtLEC2   <---------At4g35610   <--------   atgatttcgtcatggtcgactctcgcatcgctgctaagatgcgagcacgcaccatgcatgtgcaccacgcgcagcgacgacttggtattagatgctgtga  3401900                                                                                            <--------                                                                                           <---------                                                                                           ----------                                                  --------->ANAC46                         <---------DAG2                                         <---------ARR11(3)                             <-----------GT1                                     ---------->DOF2                ----------->GT1<---------ARR11(3)                                <---------------AGL15       --------->YAB1         --------->ARR11(3)         ----------->GT1       ----------------->AGL3     ------->TEIL            --------->YAB1 ------->GT1                   ----------------->AGL2  <---------ATHB12          ----------->ARR10 --->REM1(2)--------->AHL20(2) ====================================================================== -ANAC46----------->GT1---------->DOF2   --------->ARR11(3) --------->ATHB12     <---------TOE2(3)   agaaaatagcatgttaaaatataacaaaagagacccaaaaaaagaactctaaacacaatgaatcatcggtgagtaaataggctaagataatcaccttttg  3402000                                                              ------->TEIL                 ------>ZmHOX2a(1)                                       <---------ANAC46   <---------------AtSPL3      --------->At4g35610                                  --------->ZAT2<---------REM1(1)    --------->ZAT6   <---------At4g35610 --DOF2            <---------REM1(1)----------->HVH21     --------------->AtSPL8      --------->ZAT2 ------AGL15       <---------YAB1 <---------ZAT2<---------ANAC46<---------DAG2<---------DAG2   <----- ----->AGL15    --------->ICU4    <---------At4g35610     <---------------AtSPL8      <---------ZAT2 ======MADS_MADS<---------YAB1    --------->At4g35610  --------->GLK1(2)      <----------DOF2  ------   aagaagggacacaagatgatgatgaagggaacagagagctgacttgaatggtgtaagaatcaagtacctttccactatcgcttttctcagctccttcagc  3402100                                <---------YAB1                              <---------ICU4                              --------->YAB1                             --------->ICU4                             <---------YAB1                           <---------ICU4                           <--------HAHB4                          <---------YAB1                <---------YAB1                          --------->ICU4              <---------ICU4                             <---                        --------->YAB1             <---------ICU4      ------>MYB83              ----                    ---------->DOF2        <---------ARR11(3)          ------>MYB46(1)        -------                 --------->ANAC58        --------->ANAC58         <-----------GT1            -------- ----At4g35610   --------->ANAC46        --------->ANAC58        <-----------GT1          --------->ANAC58 --->At4g35610   --------->ANAC58--------->YAB1   ------>ZmHOX2a(1) --------->MYB46(3)    --------->ANAC58   aaaacaccaattgagacatacgcaaagcataattatcatactcaagaaattcctcattatgctcattttaacctccctcttactctcacaacaagaaaag  3402200                         ---------->ID1                       <------MYB83                       <------MYB46(1)                      <---------AtMYB61                      --------->MYB59                      --------->MYB111(1)                      <---------MYB46(3)                     <--------P                    <-------GAMYB                                                         <---------YAB1                   <---------MYB46(3)                                                   --------->GLK1(1)                   <------MYB46(1)                                                     <---------ARR11(3)          <---------ANAC55(2)<-----------TBP                             <---------MYB46(3) ------ZAT6        <------MYB83--------->YAB1                          <-------GAMYB   --------->ARR11(3) ------->GT1      --------->MYB59 <-----------GT1        <---------ANAC55(2)         <---------TOE2(3) -->DAG2--------->AHL20(2)  <----------DOF2 <----------DOF2           <---------MYB46(3)<---------GLK1(1) -->DOF2*TSS   ------->TEIL ------>ZmHOX2a(1)            --------->ANAC55(2) ---------->DOF2      <--   tgttactcaattacatgaatttggttggtccttttataaccattctctttgctgtagataagtgtctagtggctgttgttaaagtctaagatatcataca  3402300                                                                                                    -                                                                                             --------       <---------YAB1     -------->P                                                        <--------       --------->ICU4     ------>MYB46(1)                                                  <---------LBD16 -----TEIL                ------>MYB83       <-----------GT1                            <-----------HVH21   tacattcacattattaagtagggactccaacctgtttgtgtttgatatttctgtctctcgagacgactgactccaagtctcaagtctccatgtcccgcgt  3402400                                         ----------->GT1                                       <---------ANAC58                                       <---------ANAC58                                       <---------ANAC46                                      <---------TOE1(3)                           <---------MYB52(1)                                     <---------DOF5.7(2)                         <-----------HVH21                                   --------->DOF5.7(2)                           <-----------TGA1                                 <---------ZAT6                                 --------->YAB1                                <---------YAB1                          <---------ANAC58         <---                             <---------AHL20(2)                         <---------ANAC58         ----                             <---------YAB1                             <---------ANAC46  --------->ARR11(3)                           <---------CCA1(1)          ------>ZmHOX2a(1)---------->ID1     <---------ARR11(3)                          <---------ARR11(3)     <------MYB83 <-----------------AGL3 <---------At4g35610 --------->DOF2      ------>ZmHOX2a(1)<---------TOE2(3)       ----------------->AGL3 --------->At4g35610 ->LBD16   <-----------GT1--------->ARR11(3)     <------MYB46(1)  --------->ARR14(2) <---------ZAT2 -ANAC46----------->GT1--------->HSFB2a(2)      --------->MYB59   <---------ARR14(2) --------->ZAT2 <   actaaaggggttgtaacattttcctctagatattattgttaacgtgtaatttggtcctctaggctccaaatttggcgtttaatcgtcagctagatgttga  3402500                                                              ----------->GT1                                                            <---------ANAC58                                                            <---------ANAC58                                                            <---------ANAC46                        <---------ZAT14             --------->ANAC58                        --------->ZAT14             --------->ANAC58                      --------->ANAC46           <---------SPL7                                    <-                   --------->ZAT14               --------->ZAT14                                   <-          <----------DOF2                        <---------ZAT18            ---------->DOF2        -- ------bZIP60(1)   <---------ZAT14               --------->ZAT18            --------->ZAT14    <----- ----->bZIP60(1)---------->ID1                  <---------ANAC58   --------->KAN4(1)         -------- ------------------------ANAC81                 <---------ANAC58   <---------KAN4(1)       <---------WOX13(1)   tgtcattctgttctttttgtcttcactccagtctccagtctccaagtctagcgtactcaatgggttgtaatattccactaaagtctaagcgcgattgatt  3402600            <---------AHL20(2)            <---------AHL20(1)    <---------ZAT18    --------->ZAT18    --------->ZAT14    <---------ZAT14                                        >>>>>>>>>EIN3                    <------ZmHOX2a(2) --------At4g35610            <-----------TGA1            <-------TEIL                --------->DAG2 --------ZAT14               <---------ANAC58          --------->CCA1(2)      <----------DOF2 ------->ZAT14               <---------ANAC58       ----------->GT1       <---------TOE2(3)<---------ARR11(3) ----WOX13(1)<---------AHL20(2)                 <---------AHL20(2)  ------>ZmHOX2a(1)---------->DOF2 ->ATHB12   --------->AHL20(2)<-----------HVH21--------->AHL20(2)   ===============================HOX2a_HOX2a   gagcagtgaactaattttttttttttttgtagcgtcatttcattagagattaaatggatatacattgttcctgatttaggctttacaaaaagagatcaaa  3402700  Previous    Next  AGI:  At5g10760.1    Description:  aspartyl protease family protein. similar to chloroplast nucleoid DNA-binding protein, putative [Arabidopsis thaliana] (TAIR:AT5G10770.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44388.1); contains InterPro domain Peptidase aspartic, catalytic; (InterPro:IPR009007); contains InterPro domain Peptidase A1; (InterPro:IPR001461) Range:  from: 3400343    to: 3402208    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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