Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100          --------->AHL20(2)      --------->ANAC58                                                                    <---------At4g35610      --------->ANAC55(2)                 <---------AHL20(2)                    --------->At4g35610      --------->ANAC46           ---------->DOF2       <---------TOE2(3)        <---------At4g35610      --------->ANAC58  --------->ANAC46  --------->AHL20(2)                 ------>ZmHOX2a(1)    --- ---------MYB46(3)      --------->ANAC58 --------->AHL20(2)                 <---------ALFIN1  ------- ---->ATHB12            --------->ANAC58 <---------AHL20(2)      ----------->RAV1(2)      --------->At4g35610   attggttcaagtaatttcatactcacaagtcacaacaaagaaattaaattcgagattgagattaatgacctgagacctcctccgctcgctggagcttcaa  3395800                   --------->ANAC46                   --------->ANAC58             <------MYB83          <-------GAMYB         <---------MYB46(3)         <------MYB83         <------MYB46(1)         --------->MYB55(2)       <---------ANAC46      <---------At4g35610      <---------ZAT2     <---------RAP2.3(1)     ------>NtERF2 <----------ID1    <---------RAP2.6(2)    <---------RAP2.3(2)    <---------DEAR3(1)   <---------LBD16 --------->ANAC58                                         <---------MYB52(1)     --   <---------At4g35610                                                    --------->MYB59         ---   --------->At4g35610                        <---------ICU4           <---------ARR14(2)         <--  <-----------RAV1(1)                        <---------ATHB12          --------->ARR14(2)      <----- ---->GAMYB  <------MYB46(1)           <---------ARR14(2)           --------->ANAC55(2)   --------->MYB52(1) -->REM1(1)<--------P                  --------->ARR14(2)           <---------ANAC55(2)   -----------   cagtctgcggctggttggaatacgacaaggccaagtccaagtatcccataattcttcagaaatttcaaacgcgtattcggtattcttcgaatcaacagat  3395900          --------->HSFB2a(1)          --------->HSFC1(2)          <---------HSFC1(2)          <---------HSFB2a(1)         <---------ARR14(2)         --------->GLK1(2)        <---------GLK1(2)      --------->LBD16     --------->LBD16     --------->ANAC58     --------->ANAC46                                                 --------->ARR14(2)     --------->ANAC58                                        <---------YAB1    <---------LBD16                                        --------->YAB1 ------->At4g35610    <---------MYB59 --------->MYB52(1)  <---------ATHB12 ------>GLK1(2)       --------->TOE2(3)                 --------->YAB1<---------ARR14(2) ---------ARR10       --------------->AGL15             --------->WOX13(1)     --------->GLK1(2) ----GLK1(2)          --------->TOE1(3)       ------>ZmHOX2a(2)   <---------LBD16 >RAV1(1)--------->ARR14(2)       --------->YAB1       --------->MYB46(3)     <---------GLK1(2)   aatctgcccggaatcttcttctaacctaaaattgaatcaaaaacgggatcgatatcaacaatcacgatttcggaaactcagaatcgagctaaacattttc  3396000                                                                                               ------                                                                                              -------                                                                                              =======                                                                                       <---------WOX13(1)                        --------------->AtSPL8                                       --------->ATHB12            --------->DAG2                  ---------->DOF2            --------->ATHB12<--------P           ---------->DOF2                --------->AtLEC2            --------->ICU4<---------YAB1  ----------->GT1       <---------------AtSPL8              <---------ZAT14      <-------TEIL--------   aaaaatgaaaaaaaaaagttttaaaaatagtacctgaaaattccatgaaagaattagaagagagaagtgagaatgatgggagattcatggttgattccta  3396100                                                                           --------->MYB52(1)                                                                         --------->MYB46(3)                                                                   --------->LBD16                                                                   ------>NtERF2                                                                  <---------LBD16                                                                 <---------LBD16                 ----                                                              <---------ARR14(2)          -----------                                                              --------->KAN4(2)           <----------                                                              --------->ARR14(2)         ------------                                <-----------RAV1(2)          <----------TaMYB80          ------------ ----------->GT1         <----------ID1                      <---------KAN4(1)           <----------- >ZmHOX2a(1)             ----------->GT1                     --------->KAN4(1)           ============ -------->AGL15        ----------->GT1                      <---------KAN4(2)            <----------- ==================================================================================================== --------->AGL1      ---------->DOF2    ------>ZmHOX2a(2)   ---------->TaMYB80     <---------AHL20(2)   gttgagaaaaatagagagagagggaaagagaaaaacaggtgatcgacgttaagagaagggagcatattccggcgaacaaatggatttatttgctaaaaat  3396200                                                                             --------->DAG2                                                                            ---------->DOF2                                                                            =========================                                                                         --------->ANAC55(2)                                                                         <---------ANAC55(2)                                                                         --------->ANAC55(1)                                                                         --------->ANAC58                                                                     <-----------HVH21                                                                    ----------->HVH21                                                                   ------->MYC4                                                                   <-------MYC4                                                                   ------->MYC3                    --                                                                   ------->MYC2                   ---                                                                   -------->ABF1                  <--                                                                   <-------MYC3                   ---                                                                   <-------MYC2                   <--                                                                  --------->O2                    ---                                        --------->ARR14(2)        <--------ABF1                   <--                                       ------>MYB46(1)            --------->TGA1a                ----                                       ------>MYB83               <---------O2                   <---                                     <---------------AGL15        <---------TGA1a                <---                                     ------->GAMYB           ----------->HVH21                   ---- *TSS------------------------>ANAC81 =======================================MYC_MYB              <--- ------->GT1                         <---------MYB59       --------->At4g35610--------->ANAC58   <--- ---->AGL15                       --------->WOX13(1)       <---------ZAT2<---------ANAC46        ==== -----AGL15                      <---------WRKY12          --------->ZAT2--------->O2            <--- ----->AGL2                     --------->WRKY18(1)  ------->TEIL <---------ANAC55(2)  <---------ANAC46 ----->AGL3   ----------->GT1 --------->ANAC46     <---------SPL7 =====================bZIP_DOF  ---- ------AGL3  --------->DAG2   --------->ANAC58   <---------------AtSPL3  --------->ANAC58        <--- ====================================================MADS_MADS<-----------HVH21     --------->ALFIN1 ------AGL2 ---------->DOF2   --------->ANAC58  <------ZmHOX2a(1) --------->ANAC55(2)--------->ZAT18 ======MADS_MADS          --------->YAB1<---------ARR14(2) <---------At4g35610--------->ANAC58   <---   agaaaaaaaaaaaaaaaagtagaaagaatcacaagtcaaccaaatttggaggatgtaccgaagctgacacgtgtcacgtaaagcaagtggagtagtatca  3396300      ------>ZmHOX2a(1)  <---------PCF2 ======bZIP_DOF ------->ALFIN1                   <---------ICU4 ---->MYC3                        --------->ATHB12 -----MYC2                        --------->ATHB51 ---->MYC2                        -------->ATHB1 -----PIF5                        <---------AHL20(2) ---->PIF5                        -------->HAHB4 -----MYC3                       <---------ATHB51 ----->O2                        --------->ICU4 ------ANAC46                    <---------YAB1 ------bZIP60(2)            --------->YAB1 ----->ANAC55(2)          <----------DOF2 ------ANAC58            --------->TOE2(3)                                       --------->ALFIN1 ------ANAC55(2)       ------->TEIL                                          <---------ZAT14 ====================================bZIP_DOF                            <---------WRKY18(1) ------ANAC58      ------->MYC3--------->YAB1                            --------->ATHB12 ----->TGA1a       <-------MYC3<---------ICU4                          <----------DOF2 ------O2      --------->ZAT18<---------AHL20(2)                     --------->At4g35610 ------TGA1a   <---------ZAT18<---------YAB1                         <---------At4g35610           --   cgtgggtccttcacaagtccacatgtacctttataattattggcaattgggctaatgggcctattgttttcagcttgactggagtagggataagtctact  3396400                                                                                                    -                                                                                                    -                                                                                                  <--                                                                                                  ---                                                                                                 <---                                                                                                 ----                                                                                                =====                                                                                                =====                                                                                             <------NtERF2                                                                                            ---------                                                      --------->ZAT14                      --------->DEAR3(1)                                                      <---------ZAT18                     <---------LBD16                                                 --------->At4g35610                      <------NtERF2                                                 <---------At4g35610                     ------>NtERF2              --------->At4g35610             <---------At4g35610                        <---------ATERF1(1)              <---------At4g35610             <---------ZAT2                            <---------DEAR3(1)           --------->At4g35610                --------->At4g35610                       --------->DEAR3(1)           <---------At4g35610                --------->ZAT2                          <-----------HVH21        ---------->DOF2                     --------->ZAT18  --------->YAB1 <---------At5g28300 <----       --------->MYB52(1)          ---------->DOF2    <---------ZAT14       *TSS <----------DOF2===== ---->ZmHOX2a(1)         ------------>CBF--------->ALFIN1 <------------CBF <-----------GT1--------->ATERF1(1)   cctagtgccaaacagcagctaaaaacttgcaatcggagaaagagtgtgagctgctgtacacattgatactcccatagttactgcttctcgtcgccggagg  3396500          ------>ZmHOX2a(2)         <------ZmHOX2a(2)        --------->ARR14(2)   ------>MYB83   --------->MYB52(1)   ------>MYB46(1)                                                                                  - -------->ANAC58                                                                              ------- -------->ANAC58                                                                         ------>ZmHOX2a(2) -------GLK1(1)                                                                        <---------ARR14(2) ------>GLK1(1)                                                                        --------->ARR14(2) ------ARR14(2)      <------ZmHOX2a(2)                                                 <---------ARR11(3) ----->ARR14(2)     --------->ARR11(3)                                                 --------->ARR11(3) ===============HOX2a_HOX2a                      <---------AtLEC2<---------ALFIN1      <---------AGP1 ===========================HOX2a_HOX2a <-----------GT1    <------ZmHOX2a(1)        <---------HSFB2a(2) >LBD16 <---------ARR14(2)             <-----------GT1<---------ANAC46              --------->HSFB2a(2) --ZmHOX2a(1)<---------MYB52(1)       <---------AHL20(2)   =====================================HOX2a_HOX2a ================HOX2a_HOX2a     <-------TEIL <----------DOF2--------->At4g35610   <---------LBD16  <   aaacccaacggatccgttttgagatcaagaagaagttcattttatcgtctttcatggcgaaggagcagcacttacgaccttggtttctggatctagtacc  3396600                      <---------ZAT2                      --------->ZAT2                      --------->At4g35610                   ------>NtERF2                   <------NtERF2                   --------->LBD16                  --------->ANAC46                  --------->DEAR3(1)               <---------DEAR3(1)             <---------ANAC58                                       ---------->ID1      <---------MYB46(3)                                           <-----------GT1    <---------ANAC58<------NtERF2                              <---------AHL20(2)    <-------GAMYB--------->RAP2.3(1)                          <---------AHL20(1)    <---------ANAC58<---------ALFIN1                          <---------AHL20(2)   <---------MYB46(3) <---------At4g35610                     --------->AHL20(2)  <---------AtMYB61<---------At4g35610                    <---------YAB1 -------------------->WRI1  <-----------HVH21         ------>ZmHOX2a(2)                        ------ -->MYB52(1) <---------ANAC58                       --------->ARR11(3)        <----------DOF2-------- ----------DOF2--------->ANAC46                     <---------ARR11(3)  <----------DOF2      <-------   ggctttggttgttttgctcgccgcagctcatgtcatcgccttggtacttctcgtgatcttataattttttttctctttctctttttatatgttctgatct  3396700  Previous    Next  AGI:  At5g10740.1    Description:  protein phosphatase 2C-related / PP2C-related. similar to protein phosphatase 2C, putative / PP2C, putative [Arabidopsis thaliana] (TAIR:AT5G24940.1); similar to protein phosphatase 2C [Mesembryanthemum crystallinum] (GB:BAB88944.1); contains InterPro domain Protein phosphatase 2C-related; (InterPro:IPR001932); contains InterPro domain Protein phosphatase 2C; (InterPro:IPR015655); contains InterPro domain Protein phosphatase 2C, N-terminal (InterPro:IPR014045); contains InterPro domain Protein phosphatase 2C, manganese/magnesium aspartate binding site; (InterPro:IPR000222) Range:  from: 3393570    to: 3396201    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g10745.1    Description:  unknown protein Range:  from: 3396476    to: 3398064    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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