Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                               --------->YAB1                                        ------>MYB83         <------MYB83                                        ------>MYB46(1)      <------MYB46(1)                                       =========================RAV                                       ----------->RAV1(1)   <---------ANAC58                                     --------->MYB46(3)      <---------ANAC58                                    -------->P<---------AHL20(2)                                 --------->At4g35610         <---------ANAC46                                 <---------At4g35610  ------>ZmHOX2a(1)                                --------->ANAC58      --------->LBD16                              ---------->DOF2--------->AHL20(2)                                     <                          --------->LBD16 --------->YAB1    --------->MYB59                      <---                         --------->HSFB2a(2) <---------AHL20(2)                  --------------->AtSPL3               --------->ATHB12 --------->ANAC58    ----------->RAV1(2)     --------->ANAC58     ----       --------->AHL20(2)<---------HSFB2a(2) <---------AHL20(1)             --------->ANAC58    <----   ccctgtgaataaaaaaactattggtttccagagaaagctaccaacaataaaatttcctgagttgggtctgtcaaattcaaggaaacgtactgagcatttc  3356200         --------->ZAT18       <---------At4g35610 <---------ARR14(2)                                                                                 < --------->ARR14(2)                                                                               >>> ------ZmHOX2a(1)        ---------->DOF2    <---------TOE2(3)                               <-------- ------HSFB2a(2)   ------->TEIL             <---------TOE1(3)                            ------>ZmHOX2a(2) ----->HSFB2a(2)<---------ATHB12     <---------TOE2(3)                                  --------->GLK1(1) -----ANAC46--------->MYB46(3)       --------->MYB59--------------------->WRI1<---------ALFIN1  <----   gaggattggagcgaaccaatgaatcttcaaaggaacagtaaggtttaagcttgattttgtattcatcgaccaagagtcgaacaccttctgatctcttttt  3356300            --------------->AGL15            <---------------AGL15           <-----------------AG     <---------YAB1      <XXXXXXXXXXXXXXXXXXXXMIR159B ---------ALFIN1        --------->ARR11(3) >>>>>>>>>>>>>>LFY  <------ZmHOX2a(1)  ---------->DOF2                                  <---------ZAT2 --DOF2 <---------YAB1  <---------ARR11(3)                                              <---------At4g35610 -------GT1<-----------------AGL1    --------->MYB46(3)        ---------->DOF2          --------->ZAT2   ccccactgttattactcgtataggaagagctctctgtgaaccaaagtgacaattccatcaaacccaaatgcccaaattcaaataagctcgagcagagatt  3356400                          ------->TEIL                          >>>>>>>>>>WRKY26                          <---------ARR11(1)                    >>>>>>>>>>WRKY38                          <---------ARR14(2)                    >>>>>>>>>>WRKY43                          --------->ARR14(2)                 <---------At4g35610                         <---------ARR14(1)                  --------->At4g35610                    <---------LBD16                      ------->TEIL                              --                 <---------WRKY18(1)                  --------->ANAC58                          -----                ----------->HVH21                --------->ANAC46    ------>MYB83               -----               <---------WOX13(1)                --------->ANAC58    ------>MYB46(1)    <---------ANAC58              <---------ANAC58     --------->ARR11(3) <---------MYB52(2)     --------->YAB1   -------              <---------ANAC58     <---------ARR11(3) --------->ANAC58 --------->YAB1   <---------ANAC58         --------->ZAT6  <---------CCA1(2)       --------->ANAC58  <---------MYB59      <---------ANAC46      <-----------GT1 --------->LBD16     ------>ZmHOX2a(1)<-----------RAV1(2)     <---------ICU4 <--   gtttttagttaccactgcttgacccgcgtatctacaagttcttcctgatacaagtcacgaaccagatgaccaaacacaatcttcagcattgcgttcgaaa  3356500        --------->AtMYB61                                             <-------MYC3 --------->RAV1(1)                               <------ZmHOX2a(1)    ------->MYC3 ---->ANAC58                         --------->TOE2(3) <------ZmHOX2a(1)                         ---- ---->ANAC58                 ---------->DOF2 --------->LBD16      <-------TEIL  <-----------RAV1(2) --->DOF2            --------->AHL20(2)      ------>ZmHOX2a(1) --------->At4g35610<---------At4g35610 --------ID1         <---------AHL20(2)    ----------->RAV1(2) <---------At4g35610--------->At4g35610   gcaacaaaaaccaaaaccaatttttaaatgaaaaagaaacctttttcctgaggagtaggagaagcagatgcatatggctgattcaggtgagaattggcca  3356600                                                                                                   <-                                                                                                  <--                                                                                                 ----                                                                                               <-----                                                                                           <---------ATERF1(1)                                                            --------->ANAC58               --------->HSFC1(2)                                                            --------->ANAC46               <---------HSFC1(2)                                                       --------->REM1(2)                   <---------HSFB2a(1)                                                    ------->GAMYB                          --------->HSFB2a(1)                                                  <---------At5g28300 --------->O2   --------->GLK1(2)                               --------->ZAT18--------->TOE2(3)       --------->ANAC46<-------TEIL<-- ------->HVH21            ---------->DOF2   <---------YAB1  --------->ANAC58         --------->CCA1(2)   tgacagagatggacatttttgtgttcttcaaagttcaccaaaaattttcattaaccgtgtttacgctaatccacatgactacatgagattcgaagcctcc  3356700                                                                                               <-----                                                                                            <--------                                                                                           --------->AHL20(2)                             ------------>CBF                                          --------->YAB1 -------P                 <---------ANAC58                   <---------ICU4     <---------ANAC58 -----GAMYB               <---------ANAC58                   --------->YAB1     <---------ANAC58  <-- ----->LBD16             <---------ICU4                     <---------ATHB12    <---------ANAC46  <-- ----LBD16              <---------ATHB12        <---------MYB59            --------->YAB1  <---------AHL20(2) -------MYB52(1)    ------------>CBF    <---------ATHB51------------>CBF <-----------TBP   --------->ICU4   ggttgatatcgagggtctaaggcccaatgcttacaatatcaaattatgggcctaactatacaatcatcgtagcccatttatagcgtctatgaaaaaatta  3356800   <---------------AGL15   --------------->AGL15  <-----------------AGL1  <-----------------AG           <----------DOF2                                                  --- ---------->ID1           --------->ATHB12                                               <-----------HVH21 ------GT1                -------->HAHB4           <---------ICU4                        --------->TOE2(3) -ICU4--------->ARR14(2) <---------ATHB12         --------->ICU4                ---------->DOF2 <---- -------DAG2    <---------AHL20(2)  --------------->AtSPL8         --------->LBD16       <-----------TGA1 --------DOF2   --------->AHL20(2)  <---------------AtSPL8       <-----------------AGL1 --------->bZIP60(2)   cttttccctatttgctaataaaactaaatgattcgatttatgtactaatctactgattacatttgtgtccgaagaaggcatgaaaagacaacgtcagact  3356900                       <---------ICU4                 <------ZmHOX2a(2)                      <---------YAB1                 --------->AGP1                --------->ATHB12               --------->AtMYB61                <--------HAHB4                --------->MYB46(3)                <---------ICU4                <---------MYB55(2)     <---------ICU4 --------->YAB1           ------>MYB83             --------->ZAT14     --------->YAB1--------->AHL20(2)        --------->SPL7           <---------ZAT14    --------->ICU4 <---------AHL20(2)        -------->P       --------->AHL20(2) -------->GT1  --------->ICU4         ------->TEIL   <---------ARR11(3) ------DOF2    <---------YAB1--------->LBD16 ------>MYB46(1)--------->AHL20(2)    <----------DOF2   <   ttgttaattatcagataatcatttattattccgaacaatgcatcccctaccaccagatcaatttttatatagtttagtgatgttctttttttttttcatt  3357000                                                                                                 ----                                                                                                <----                                                                                                <----                                                                                                <----                                                                                                <----                                                                                          <---------YAB1                                                                                --------->AHL20(2)                     --------->YAB1                     --------->ARR11(3)    <----------DOF2   <----                  --------->YAB1                <----------DOF2              --------->TOE2(3)  -----             <----------DOF2             <---------ANAC58        <---------ALFIN1   <---------ICU4      --------->AHL20(2)<---------AtLEC2 <---------ANAC58      --------->ANAC46 <---------AHL20(2) ---------ALFIN1 <---------YAB1      --------->CCA1(2)  <---------ARR11(3)   <-----------------AGL3   caacacattttaaaactttataataagcatggaacaaaaatatgcgtcttcttttgtatatattcccccaatctacatacctttaattagttctaattcc  3357100  Previous    Next  AGI:  At5g10620.1    Description:  Identical to UPF0247 protein At5g10620 [Arabidopsis Thaliana] (GB:Q9LXB4); similar to unnamed protein product [Vitis vinifera] (GB:CAO43951.1); contains InterPro domain Protein of unknown function DUF163 (InterPro:IPR003742) Range:  from: 3355321    to: 3356616    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version