Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                    --------->TOE2(3)                                 ----------->GT1                               --------->MYB52(1)                              ------->GAMYB                             <---------MYB55(2)                                                    <-    <-------MYC3             <---------MYB52(2)        <----------DOF2   --------->TOE2(3)      -----    ------->MYC3             --------->MYB46(3)       <---------DAG2    ----------->GT1        <----- ------>GT1                ----------->RAV1(1)     <-----------GT1    --------->MYB52(1)--------->YAB1 -----ZAT6                --------->REM1(1)--------->TOE2(3)        <---------MYB52(2) <---------YAB1   gtaacatgtgtacatagcatcatcgtctacaacaaacgttatatttcttaatttcaccttttaccaaaaaacaaacgttatattctgttatcatctctgt  3347000                                                                                           <---------                                                                                         --------->ALFIN1                                                                                         <-----------                                                             <---------GLK1(1)         <-----------RAV1(1)      --------->HSFB2a(2)                       <---------LBD16                   --------->ANAC58      <---------HSFB2a(2)                     --------->ARR14(2)                  --------->ANAC46 --------bZIP60(2)                 <---------DAG2           --------->ARR11(3)    --------->ANAC58 ------>HVH21                      <----------DOF2          <---------ARR11(3)--------->CCA1(2) ------HVH21                  ---------->ID1  <---------ARR14(2)           <---------KAN4(2)<--------   gacatgttccaaaaccatctaatctaagtcttgtctcctttatctacatatacggacaattagatatcacatgtacgaatatacaggcaatgtgggacaa  3347100                                                      <---------RAP2.6(2)                                                     <---------At5g28300                      <----------ID1                 --------->RAP2.6(3)                      --------->ZAT18               --------->MYB52(1)                   --------->DAG2              --------->AHL20(2)            <---------AHL20(2) -ID1--------->AHL20(2)       ----------->GT1  <---------AHL20(2)            --------->AHL20(2) ----AtSPL8       --------->DAG2        --------->TOE2(3)                --------->AHL20(2)   ------- -PCF2           ---------->DOF2        --------->TOE1(3)          ----------->GT1    <---------ANAC46   aattcaaaaaaatgtgtctaaaaggggacaagtggtcattaaccttaatttaaattacggccaaatgtttagtaactaaataaatatggggtcgaaatgt  3347200                                                                                          --------->AHL20(2)                                  --------->ZAT18                                      --------->ARR11(3)                                  <---------ZAT18                                      <---------ARR11(3)                          <-------TEIL                                               <---------YAB1                        <---------SPL7                                        --------->ANAC58                       <---------ANAC46                                      --------->DAG2    ------                       <---------ANAC58                                     ---------->DOF2    <-----                       <---------ANAC58  --------->YAB1        ---------->DOF2--------->ANAC58<------                      <---------------AtSPL8                  <---------AHL20(2)     <---------TOE2(3)                    --------->ALFIN1 --------->ZAT6---------->DOF2       --------->ANAC58 <---------AHL20(2) ---->GT1       ---------->DOF2   --------->ZAT14 --------->ICU4         --------->ANAC58--------->AHL20(2)   aaattctaaattatctcacaaagtggggtacagaagtgaacactaataagtcataaagagagatttaaaggagaaacgaaaagcattaagatttaattta  3347300                   ------->GAMYB                  --------->MYB46(3)                 ------>MYB46(1)                         --------->LBD16                 -------->P                             <---------ANAC58                 ------>MYB83                           <---------ANAC58        <---------ZAT6        <---------AHL20(2)        --------->ANAC55(2)                         -      ----------->GT1 ---------->DOF2                  <---------LBD16                             -- --->AHL20(2)  --------->AtMYB61               ----------->GT1    <------------CBF                 -- ----AHL20(2) --------->MYB46(3)       --------->GLK1(2)<---------ANAC55(2)    ---------->DOF2    --- ---AHL20(2) >>>>>>>>>MYB2    --------->AHL20(2)    <------------CBF----------->GT1           -------   tatgaaattagtgaaaaccaaccaaaaagaatttatatgaaattctaaggggcaaattgcggaacaaagattgtaaatagcaaaaggagtttcagtataa  3347400     <----------ID1 -------->CCA1(2)                                                      ---------->DOF2 ------->AHL20(1)     *TSS                                         ---------->DOF2 ------->ARR11(3)    --------->YAB1                              --------->ANAC58             ------- ------>AHL20(2)   --------->AHL20(2)         <----------DOF2    --------->ANAC58      <-------TEIL ---->TBP         --------->YAB1    --------->TOE2(3)  --------->MYB52(1)         --------->AHL20(2)   atatatggggacaagggccataaaaataacaaaaacattcttagagagctttggagataacgagaacaagaaagaaagagaagattatatacatagaaaa  3347500                                                                       <---------MYB46(3)                                         <---------ANAC58              <------MYB46(1)              <              --------->ALFIN1           <---------ANAC58              <------MYB83             <----            <---------ANAC58           <---------ARR14(2)          --------->ATHB12--------------->AGL15            <---------ANAC46           --------->ARR14(2)         <---------YAB1   <---------------AGL15    <------ZmHOX2a(2)              <-------TEIL                 --------->YAB1    <-----------------AGL2   <---------ARR11(3)  <---------------AtSPL8                  <---------YAB1     <-----------------AGL3 --->DOF2   <---------ANAC58   ----------->ARR10       <----------DOF2--------->MYB59           <----   ggagagatcaaatggagtgggagaaatggtacttagatgcggttcttgtgccaagtgctttacttatgatgtttggttaccacatctatttgtggtataa  3347600                                                                              --------->MYB111(1)                                                                              --------->MYB46(2)                                                     ------>ZmHOX2a(2)        ----------->GT1                                                   --------->ARR14(2)         --------->MYB111(2)                   ----------->RAV1(1)             <---------ARR11(3)  <---------YAB1            ------>ZmHOX2a(1)               <------NtERF2           --------->ICU4         <------ZmHOX2a(2)                --------->ANAC46          <---------ATHB12        <---------ARR14(2)                <---------ALFIN1         <---------RAP2.6(3)        --------->ARR14(2)  <------MYB46(1)------>NtERF2     <---------At4g35610     --------->DEAR3(2)     <------MYB83 --------->LBD16     --------->At4g35610     --------->MYB46(3)    <---------------AtSPL8  --------->ARR11(3)<---------ICU4 -------TEIL<----------DOF2--------------->AtSPL8  <---------ARR14(2)--------->YAB1 -----TOE1(3)    <---------ZAT18        --------->ANAC46 <---------ANAC58  ------------>MYB.PH3(2) -----TOE2(3)    --------->ZAT18       <---------LBD16   <---------ANAC58 <---------TOE2(3)   ggttcgaaccgatcctttctgcaccattgttggtacaaattcccgcgcccgtcgatcttgggtagcagccatcatgaaggtagttatattactcaaaaac  3347700                                                                                --------->YAB1                                                                          --------->WOX13(1)                                                                         --------->AHL20(2)                                        --------->ATHB12                 <---------AHL20(2)               --------->GLK1(2)     <---------ANAC55(2)              <---------ICU4         --------->LBD16             --------->ANAC55(2)          <-----------GT1         ---------->DOF2        --------->LBD16         <---------ZAT6                   --------->ICU4<---------YAB1        --------->ANAC46  <---------ARR11(3)                   <---------ICU4<---------ICU4         -       <---------HSFB2a(2)--------->ARR11(3)                  --------->ICU4 --------->YAB1   -------       --------->HSFB2a(2)--------->GLK1(2)                 ----------->GT1 <---------ATHB12---------   gatatatatcccgaaataatctttcaaaaatcttgtgttaagtgattgtagtaactagtaagtagtaattactaattaatcatcatattagcgaaagtaa  3347800                                                                                                <----                                                                                                -----                                                                                               ------                                                                                      <------NtERF2                                                                                     <---------DEAR3(2)                                                                                    <---------DEAR3(1)                                                                                    --------->ETT(1)                                                                                    <---------DREB2C(2)                                                                                    <---------RAP2.3(3)                                                                                    <---------RAP2.6(2)                          <---------ICU4                                           <------NtERF2-----    --------->ATHB12     --------->ICU4                                            --------->DDF1   <-------TEIL          <---------YAB1                   <---------ANAC58         --------->RAP2.6(3) -------->At4g35610 --------->YAB1                        <---------ANAC46         --------->ATERF1(1) -->AHL20(2)        --------->TOE2(3)             --------->YAB1                  <-----------HVH21 -->GT1          <-----------GT1 --------->MYB52(1)       <---------ANAC58       --------->ALFIN1   ttagcttcattgaacatatataccataatgtttactaactgcaatttttctatgaaaattgcttatgcaaaaacttagtataggtgtcggcccaaaattt  3347900  Previous    Next  AGI:  At5g10580.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G31330.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN79714.1); contains InterPro domain Protein of unknown function DUF599 (InterPro:IPR006747) Range:  from: 3347422    to: 3348735    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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