Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                  <-----------HVH21           <-----------GT1                <-----------TGA1          -------->HAHB4             --------->ARR11(3)          <---------YAB1       <---------ANAC55(2)             --------->YAB1                                      <---------AHL20(2)       --------->ANAC55(2)            <---------ATHB51                                     --------->AHL20(2)     <-----------GT1                  <---------ATHB12                     <---------ARR11(3)     --------->AHL20(2)       ------->TEIL--------->YAB1   ----------->RAV1(1)            --------->AHL20(2) --------->AHL20(2)        <---------MYB52(2) <---------YAB1     ---------->DOF2 <---------ANAC55(2) ------>GT1  <---------ARR11(3)--------->MYB46(3)         --------->MYB46(3)     ----------->GT1   gtataaattacttaatatcgtcactgaaaacgaaccatcaataataatacgattcagacaacaacacaaaagaaaacgatattaagtaaaaaaaaaattt  3341000                          <------MYB46(1)                          <------MYB83                         --------->MYB111(2)                                             ------>ZmHOX2a(1)                         --------->MYB55(2)                                             --------->TOE2(3)                         <---------MYB46(3)                                             --------->TOE1(3)                         <---------DEAR3(1)                                        ------>ZmHOX2a(2)                         --------->MYB46(2)                                        =============HOX2a_HOX2a                         --------->MYB111(1)                                      <---------GLK1(1)                         --------->ALFIN1                                        <---------ARR11(3)                         <---------AtMYB61                                       <---------ARR14(2)                        <---------MYB55(1)                                       <---------AGP1                     <---------TOE2(2)                                           --------->ARR14(2)        --------->At4g35610                                                      <-----------ARR10        <---------ZAT2  <--------P                                  --------->ICU4--------->GLK1(1)        <---------At4g35610                                    --------->YAB1    --------->ARR11(3) --------->WOX13(1)  <---------TOE1(2)    <------ZmHOX2a(2)  <------------CBF   <---------CCA1(2)   catcaatctcagcttatgcctcataggttggtgctggaccatggatcaaaaacaaacacactaaattgtaatgttttctagtggatctctccttaaacaa  3341100                                      <---------AHL20(2)                                      --------->AHL20(2)                               <-----------GT1                       --------->ICU4                          <---------AHL20(2)                    --------->ANAC58                        <---------AHL20(2)                <---------MYB52(2)                    -----                       --------->AHL20(1)                 --------->MYB46(3)                   ------                       <---------AHL20(1)      <---------DAG2   --------->ANAC46              -------                      <---------AHL20(2)       <----------DOF2  --------->ANAC58  <-----------HVH21                    <-----------TBP  --------->YAB1  --------->ANAC55(2)    <-------TEIL ----------->GT1   ctagacaaaactacttatttgtatatatatttttaactattaaaatccactttttatgtaacaaacaagtcataaatatacatatgtcaaatggaataaa  3341200                                                                                       <---------ZAT2                                                                                       --------->ZAT2                                                                              ----------->HVH21                                                                              --------->WRKY12                                                                      --------->ARR14(2)                                                                ------->TEIL  --------->WRKY38(1)                 ----------->GT1                              <-------TEIL  <----------DOF2       <---------ATHB12                       --------->ANAC55(2)     <---------ARR14(2) --------->ZAT18 ------>GT1     --------->DAG2   <---------YAB1              --------->AtLEC2 --------->WRKY45 --->DAG2      ---------->DOF2  ------------>CBF      ------->TEIL    ------->TEIL     --------->At4g35610 --->DOF2----------->GT1    <---------ICU4    <---------ANAC55(2)    <---------CCA1(2) <---------At4g35610   gtaattctaatcagttaaaaagtgaattcttcattacaattcacacttatgtaatgcatttacatgcatttgtatcttctttgaccccaagctcacaaac  3341300                                                                                                   --                                                                      --------->ANAC58         ------                                                                      --------->ANAC58       --------            <----------DOF2                                        ----------->HVH21      --------->ANAC58         <---------ALFIN1                                    --------->ANAC58             --------->ANAC58  <---------ZAT14               --------->HSFB2a(2)        --------->MYB52(1)           ---------->DOF2  <---------ZAT18               <---------HSFB2a(2)  --------->CCA1(2)--------->ANAC46--------->ANAC58  --------->ZAT14     --------->MYB52(1)      ---------->DOF2--------->ANAC58         --------->ANAC58   tctgttcacttccactttcacaaataacagagtttcagaaaatagagagaaagagagatggaaacggaattgacgcaattgagaaaacaagaaagcaaca  3341400         --------->DOF5.7(2)    <---------WRKY18(1)        <----------DOF2        --------->WRKY38(1)  <---------WOX13(1)       <---------ANAC46       <---------WOX13(1)  --------->ATHB12     ------->GAMYB           <-------GAMYB        -------->HAHB4  --------->MYB52(1) <-------TEIL                --------->ICU4 ------->TOE2(3)   <---------ARR14(2)            <---------YAB1                        <---------HSFB2a(2) --->MYB46(3)      --------->ARR14(2)            <---------ATHB12                      --------->HSFB2a(2) --->RAV1(1)      <------ZmHOX2a(1)       ---------->ID1                       --------->MYB46(3)<---   atctcaacggcgttaatggaggattcatggcgattgaccaattcgtcccaaatgattggaacttcgattacctctgtttcaacaatcttctccaagaaga  3341500                                                                                    <-----------TGA1                                                                                   --------->bZIP60(1)                                                                                   --------->O2                                                                                ------->GAMYB                                                                            --------->MYB46(3)                                                                          <---------ALFIN1                                                             <---------ANAC58   --------->DEAR3(1)                                                             <---------ANAC58  --------->MYB46(3)                                                     --------->AtMYB61    --------->AtMYB61                                                   ------>NtERF2       --------->AtMYB61                                                   <---------ATERF1(1) ------->GAMYB<-----------HVH21                                                  <---------ALFIN1    --------->MYB46(3)                                                  --------->RAP2.6(2) <---------MYB55(2)          <--                   <<<<<<<<<TBF1                 --------->MYB46(3)  -------->P<------------AtMYB77       --------->YAB1      <----------DOF2      <---------At4g35610 --------->WOX13(1)          <---- ----------->RAV1(1)  <<<<<<<<<TBF1             --------->At4g35610--------->MYB46(3)       <-------- -------ID1    ------>ZmHOX2a(1)   ------->TEIL--------->ANAC46 --------->REM1(1)  <---------bZIP60(1)   cgacaacattgatcatccttcttcttcttctttgatgaatctaatttctcagccacctccattgcttcatcaaccaccacaaccgtcgtcacctctttat  3341600         <---------ALFIN1                                                                  --------->ANAC58        <---------At4g35610                                                                --------->ANAC58        --------->At4g35610                 --------->GLK1(1)                           --------->ARR14(2)        ------>NtERF2                       <---------GLK1(1)                         ------>NtERF2      --------->RAP2.3(1)                  --------->ARR14(2)                       <---------LBD16     ------>NtERF2                         <---------ARR14(2)                       --------->RAP2.6(3)     <---------ATERF1(1)                   --------->ARR11(3)                     ------>ZmHOX2a(1)     --------->LBD16                       <---------ARR11(3)          ------>ZmHOX2a(1)<---------ARR14(2)    --------->DEAR3(1)                    <------ZmHOX2a(1)         ===================HOX2a_HOX2a    --------->ANAC46                 --------->HSFB2a(2) ------>ZmHOX2a(1)--------------------->WRI1   <---------LBD16              <----------DOF2      --------->ANAC46  ================HOX2a_HOX2a -------GLK1(2)     <----------DOF2  <---------HSFB2a(2) ==============================HOX2a_HOX2a -----YAB1     ------>ZmHOX2a(1)------>ZmHOX2a(1)  <---------ALFIN1 ------>ZmHOX2a(1) --------->LBD16 --DOF2--------->DEAR3(1)   <---------ARR14(2)<---------YAB1    <-----------GT1 ------>ZmHOX2a(2)   gattctccgccgctctcctccgctttcgactatccttttctcgaggatatcatacactcctcttattctcctcctccattgatccttccggcttcgcaag  3341700                 <---------YAB1           <-------TEIL               --------->ANAC46       <---------ARR11(3)        <---------ICU4                --------->ARR11(3)                  ----------->GT1      ------>MYB83              --------->ANAC58                     ---------->DOF2      ------>MYB46(1)           --------->ANAC58      <---------------------WRI1     ----------->RAV1(1)      ---------->DOF2  --------->ANAC58   --------->ANAC58    --------->AtMYB61        <------ZmHOX2a(1) --------->ANAC58   --------->ANAC58           <-------   agaacaccaacaattactcaccattgatggaggaaagcaagagcttcataagcatcggagagactaacaagaaaaggagtaacaagaagcttgaaggtca  3341800                                       --------->At5g28300                              <------NtERF2                            <---------DEAR3(1)                            <---------ANAC46                           <---------LBD16                           <------NtERF2                           --------->ATERF1(1)                          <---------RAP2.3(1)                          <---------ORA47(2)                         <---------DEAR3(1)                       --------->CCA1(2)                    ----------->ARR10 ----------->GT1                   <------NtERF2   --------->MYB52(1)                  --------->LBD16  ------------>MYB.PH3(1)                 <---------ANAC46 --------->ARR14(2)        <---------ZAT2                <---------LBD16   <---------ARR14(2)        --------->ZAT2      ---------->DOF2        --------->GLK1(2)<---------RAP2.3(3)       ------>MYB46(1) <------ZmHOX2a(2)       <---------GLK1(2) <---------RAP2.3(2) ----------->HVH21    <---------ARR14(2) ----HVH21    <-----------RAV1(1)<------ZmHOX2a(1) ------>MYB83   --------->ARR14(2)   gccttcgaagaatcttatggcggagagacggcggaggaaacggttaaatgaccgactctccctgctccgatccattgtccctaaaatcaccaaggtcaaa  3341900  Previous    Next  AGI:  At5g10570.1    Description:  basic helix-loop-helix (bHLH) family protein. similar to BHLH093 (BETA HLH PROTEIN 93), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT5G65640.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO38705.1); contains InterPro domain Basic helix-loop-helix dimerisation region bHLH; (InterPro:IPR001092); contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598) Range:  from: 3341358    to: 3342993    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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