Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                       <------ZmHOX2a(2)                                                    --------->AGP1                                                    <---------ARR14(2)                                                    --------->ARR14(2)                                                    <---------ARR11(3)                                                    <-----------ARR10                                                   --------->GLK1(1)                                                <---------At4g35610                                              --------->MYB46(3)                                 <---             <---------ALFIN1               ----------->RAV1(1)                                ------            --------->MYB46(3)            --------->LBD16                                      ------          <---------WRKY18(1)            --------->DEAR3(1)                                   -------      <---------ZAT2                     --------->ANAC46                                     <------      --------->ZAT2                     --------->ANAC58                                     -------   ------->GAMYB                         --------->ANAC58       --------->SPL7            --------->At4g35610 --------WRKY12                         --------->ANAC46      <---------SPL7              <---------At4g35610 ------>DOF5.7(2)                     <---------ALFIN1       --------->TOE2(1)           ============ --------HVH21                      ------>MYB46(1)--------->At4g35610 <---------ANAC58  ----------->RAV1(1) ----->TOE1(3)    <---------MYB52(1)------>MYB83--------->At4g35610    <---------ANAC58<-------TEIL ----->TOE2(3)   <-------GAMYB <---------ALFIN1------->GAMYB --------->TOE1(1)   ---------->DOF2<----   gtcaacccagcttgaccaccgttgtacatagcccgaccttccaccgcaacagcagatccaatctcgtaccatagcgttctattgaaagatgcagcagata  3339000                              <---------------------WRI1                              <------ZmHOX2a(2)                            --------->GLK1(1)                         --------->LBD16                     <---------DOF5.7(2)                        <---------DEAR3(1)                 --------->DOF5.7(2)                     --                        <---------ANAC46                   <---------MYB52(1)                     ---         ============================HOX2a_HOX2a      <---------PCF5                  ------>NtERF2--   <---------ANAC55(2) <------NtERF2                 ----------->HVH21               --------->DEAR3(1)   ----------->RAV1(2) --------->ATERF1(1)          --------->LBD16                  <---------ETT(1) ------YAB1            <---------LBD16              --------->HSFB2a(2)      ---------->DOF2     <--- --->CCA1(2)          <---------RAP2.3(1)          <---------LBD16         --------->REM1(2)  <------ --->ARR14(1)        <---------RAP2.3(2)          <---------LBD16        --------->LBD16    --------- -->ARR14(2)         <---------RRTF1(3)        --------->HSFC1(2)       <---------ANAC46    <-------- ---ARR14(2)         <---------RAP2.6(2)       <---------HSFB2a(1)      <---------ANAC58   --------->MYB46(3) -->ARR11(1)         <---------DEAR3(1)        --------->HSFB2a(1)   --------->ARR14(2)  --------->AtMYB61 ==============RAV  --------->At4g35610        <---------HSFC1(2)    <---------ARR14(2) --------->MYB46(3) ---TEIL <------ZmHOX2a(1)<------NtERF2--------->WRKY12   <-------GAMYB <---------ANAC58<---------MYB55(2)   cgattacctgaggaaaactagtagcggcggagatcgaaccgttgaaggaaactccgggaccgttatcggcgagtccgtgtaaagactccgaccaccactc  3339100                                                            <---------HSFB2a(2)                                                    <---------ARR14(2)                                                    --------->ARR14(2)                                            <---------ZAT2  --------->HSFB2a(2)     <------ZmHOX2a(1)                      --------->ZAT2 <---------LBD16 ------->SPL7                  <---------At4g35610  ------>MYB46(1)                                 < ------>SPL1(1)                --------->ZAT2 --------->WRKY12                  ===================== ------->SPL1(2)               --------->At4g35610  ------>MYB83                ===================== ------SPL7                 <---------At4g35610   <---------MYB59               <---------TGA1a <---- ------------SPL14  <---------SPL7          <---------At4g35610                 <---------O2   <----- >AtMYB61       <---------ANAC46            --------->At4g35610          --------->ALFIN1   <-------- -ALFIN1     ----------->HVH21 <---------ZAT2 ----------->HVH21         <------ZmHOX2a(1)   <--------   gtacggaggaataccgagacggggtactgaagcagctgtgtttgagagctgacctatcttctctgggagcatgaggagggagacgagagaaattgctcgt  3339200    <---------TOE2(3) ----------DOF2 ==MYC_MYB ==========bZIP_DOF -----MYB52(1)                                                                          <---------TOE2(3) --GAMYB                                      <------ZmHOX2a(1)                         <---------TOE1(3) -ANAC58                           ----------->GT1                            <---------TOE2(3) ----- -ANAC58 ---------->DOF2           --------->At4g35610     --------->ZAT18--------->GLK1(2)     <----   tgttttatggataaagagacattgcagaagggataagagctaaaatgaggaggtttacaagggaactgtggatgagaatcgaggtttttgaaggtttcag  3339300                                      ------->GAMYB                                    <---------At4g35610     <------NtERF2                  --------->At4g35610   <---------ANAC58               --------->ZAT18   <---------ANAC58               <---------WRKY12                 *TSS   <---------ANAC46               <---------ZAT14               <---------AHL20(2)      ----------->GT1  <---------LBD16                 <---------WRKY38(1)     <------ZmHOX2a(1)           --------->DAG2 ---->At4g35610                <---------ZAT6 --------->YAB1   --------->AHL20(2)    ---------->DOF2 -----At4g35610        <------ZmHOX2a(1)     <-------TEIL----------->GT1       ----------->GT1  -----   ctatggcggaagtgaagaagagtaaggagattagagtcaactgaagattcatattttggaggaaaataaatctgtagagaagagtgaaaaaggaaactaa  3339400                                                                    <---------ZAT14                                                                    --------->ZAT14      <---------At4g35610                                                               <---------ZAT14       <-----------HVH21                                                               --------->ZAT14    --------->ANAC55(2)                                                            <------MYB83   <---------ANAC58                                                            <---------DEAR3(2)    <---------ANAC58                                                            <---------MYB46(3)    <---------ANAC55(1)                                                            <------MYB46(1)<---------ANAC58      ----                                                           <---------MYB46(3)     <---------ANAC55(2)                                            <-----------GT1<---------AtMYB61      <---------ANAC46                ------>MYB83         --------->TOE2(3)    <---------MYB52(1)      <---------ANAC58                ------>MYB46(1)    --------->ARR11(3)     <--------P<---------At4g35610  --------->At4g35610              <---------MYB59      <---------ARR11(3)     <---------MYB55(1)     --------->MYB52(2)    ----------->GT1           --------->At5g28300        <---------MYB52(1)<---------ANAC46---------- ----->DOF2<-----------GT1   ----------->GT1--------->MYB52(1) --------->ZAT18  <-----------GT1<-----   aaggtatagttttaaaccgaactaaatagaccggtaaaatctaaattaacagttggaccggttggttcactgctgtttcttgttacttgtcatttgacgg  3339500                  <---------ICU4                                --------->ZAT14                 <---------YAB1                                 <---------ZAT18                 --------->ICU4                                 <---------ZAT14               --------->YAB1                             --------->ARR11(3)               <---------ICU4                           <---------YAB1       <---------PCF2                             <---------AHL20(2)       <---------PCF5                             --------->AHL20(2)       <----------ID1                             <---------AHL20(1)                <---------DAG2--- ----->SPL7   <---------ATHB12                    --------->AHL20(1)     <---------YAB1      <------- ->HVH21------>NtERF2     <----------DOF2   ----------->GT1<------ZmHOX2a(2)        <----------DOF2 < ----SPL7     --------->ICU4                --------->YAB1<---------ARR11(3)  --------->ALFIN1    <--   acggtagaggggccaaatcattatgggcctttatctaatcgatttatagtaattaattaagatcagtgaacatttatgaattggggctttatctaatcaa  3339600                                                                                                 <---                                                                                                 ----                                                                                                 ----                                                                                                 <---                                                    <------MYB83                            <--------                                                   <---------MYB46(3)                       --------- ------>ARR11(3)                     <----------DOF2<------MYB46(1)                         <-------- --ATHB12             <---------ANAC58          <---------ANAC58                ---------->DOF2 ----- ---------ETT(2)      <---------ANAC58          <---------ANAC58     --------->STY1(2)     --------->AHL20(2) -------ARR11(3)    <---------YAB1<-----------GT1 --------->ALFIN1   <---------STY1(2)   --------->TOE2(3)   ggtctacaatttttgtagactaatgcttgaataattttacttttacaaatgggtgggtttcaagtgtctctagctagttgacaaaagaaaacattaaatt  3339700        --------->AHL20(1)        --------->AHL20(2)        <---------AHL20(2)       <---------AHL20(2)       --------->AHL20(2)  <---------AHL20(2)                                                     <---------AHL20(2) ------AHL20(2)                                           --------->ANAC58   --------->YAB1 ----->AHL20(1)             <---------AHL20(2)   <---------AHL20(2)      --------->AHL20(2) ----->AHL20(2)    --------->YAB1             <---------AHL20(2)       --------->TOE2(3) ------AHL20(1)   <---------YAB1              --------->AHL20(2)     --------->AHL20(1) -AHL20(1)      --------->YAB1           <---------AHL20(2)          <---------AHL20(1) >AHL20(2)  --------->AHL20(2)           --------->AHL20(2)     --------->AHL20(2) -AHL20(2)  <---------AHL20(2)     ----------->GT1        --------->ANAC58   ----------->GT1 ---->AHL20(2)  <---------ICU4 <---------YAB1 --------->AHL20(1)<---------AHL20(2)                  -   ttattttaaaaaaattaaaaatgatagtattttaaaattgtatataaattttttattcacaaggatttaaaaatattaattgtaaataacaaaaatttta  3339800                                                      ----------->GT1                                                      <---------ANAC46                                              <-----------GT1             --------->ANAC55(2)          --------->ATHB51          <---------AHL20(2)              --------->AHL20(2)                  ------->TEIL         --------->AHL20(2)               <---------AHL20(2)            <---------AHL20(2)      ------>MYB83                    --------->ICU4<---------ANAC46   <---------AHL20(2)      ------>MYB46(1)          ---------->DOF2<---------AHL20(2)       --------->AHL20(2) -------->MYB46(3)            <---------AHL20(2) <----------DOF2     --------->YAB1   aaaccaccaaattttatgtattgtagttatattaaaagtcagaattatttactttggtgtaaaactctctaaaataaatgaaccgaaaactcaaaaccca  3339900  Previous    Next  AGI:  At5g10560.1    Description:  glycosyl hydrolase family 3 protein. similar to XYL4 (beta-xylosidase 4), hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] (TAIR:AT5G64570.1); similar to BXL3 (BETA-XYLOSIDASE 3), hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] (TAIR:AT5G09730.1); similar to glycosyl hydrolase family 3 protein [Arabidopsis thaliana] (TAIR:AT1G78060.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO38706.1); similar to beta-D-xylosidase [Hordeum vulgare] (GB:AAK38482.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61742.1); contains InterPro domain Glycoside hydrolase, family 3, C-terminal; (Inte Range:  from: 3336256    to: 3339367    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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