Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                               <-------                                                                                             <-------                                                                                             <-------                                                                                            <--------                                                                                           ------>ZmHOX2a(1)                                                             ----------->GT1              --------->TOE1(2)                              <---------WRKY12            =================================HOX2a_HOX2a                      ---------->DOF2                     <------ZmHOX2a(1)               --------->TOE2(2)                  --------->TOE2(3)                 <---------YAB1                  ==============HOX2a_HOX2a ---->At4g35610   --------->TOE1(3)               --------->YAB1                    ------>ZmHOX2a(2) >TOE2(3)       ------->TEIL  <---------WRKY38(1)<---------YAB1                   <---------ARR11(3) >TOE1(3)       -------->P    <---------WRKY45   --------->ICU4                   --------->ARR11(3)   ataaaactaattagcatcaaccttaaaagtagtcaactaagtctatctgttatcatgagaggaatgtgataaacaattgtatatgatcttatcctacgtg  3327700                                                             --------->DAG2                                                       ----------->GT1                                                       <---------TOE2(3)                    ---------                             <---------YAB1       --------->YAB1                           <---------LBD16   --------->MYB46(3)       --------->ARR11(3)    --------->ATHB12              <---------AHL20(2) --ANAC58     <-------TEIL  <---------ARR11(3)    <---------ICU4            --------->AHL20(2)   <--- --ANAC46    --------->CCA1(2)                   --------->ICU4    ================================== --ANAC58   <---------ARR14(2)                   <---------ATHB12  <------ZmHOX2a(1)   <-----------GT1 -TOE1(2)   --------->ARR14(2)            ----------->GT1   ---------->DOF2 <---------AHL20(2)  <----   caagaacaaacccagatacaaaaacaaaattatctttgaaaacgatgtgaaatcattaagaaaaaagtaggaacttatttaaatatttgtaaccctggat  3327800                                                                                             ------->GAMYB                                                                                            ---------                                                                                            <--------                                                                                          ------>MYB46(1)                                                                                          ------>MYB83                                                                                          --------->MYB52(1)                                                                                        ------->GAMYB                                                                                        <---------MYB55(2)                                                                                        --------->MYB46(3)                                                                                       --------->ANAC46                                                                                      ------>MYB83  -                                                                                      ------>MYB46(1)                                                                                      -------->P   --                                                                                    --------->AtMYB61     --------->AtLEC2                                                              --------->MYB46(3) >LBD16--------->YAB1                                                             >>>>>>>>>>MYB80 --- ------ICU4                                                                     ---------->DOF2   --- ==HOX2a_HOX2a                            --------->ARR11(3)                  ------>ZmHOX2a(1) <---- --ZmHOX2a(2)      <-----------GT1      <---------MYB52(1)                   --------->TOE2(3)  -----   catggccattcagaaaacaataaactttctatgacttatccagttatcttcattttcgtcgaacacttggtgagcatgtccttaaaccaacccaacgaac  3327900       --------->ARR11(3)       <---------ARR11(3)                                                             --------->ANAC46 >MYB46(3)                                                                            --------->ANAC58 -MYB52(2)    --------->ANAC58                                                  <---------TOE2(3) -------->TOE2(3)                                   --------->ATHB12           <---------DOF5.7(2) --------->RAV1(2)                                 <---------YAB1              --------->MYB52(1)  <- ----->P      --------->ANAC58                  <---------AHL20(2)           --------->DOF5.7(2)   -- ------>MYB52(1)                        --------->YAB1                ------>ZmHOX2a(1)         ----- -----MYB111(2)  <---------LBD16        --------->ATHB12              <----------DOF2 --------->ANAC58 ---->MYB46(3)--------->ANAC46         <---------YAB1              <---------YAB1--------->ANAC46 <--   tacctgaaaaatctccaagcccggttcaaaaaaaactcagaatgatagaatttatgatttgacaaaattatcctttagcattaacgaaacgcaagtttct  3328000                                                                                   ------>NtERF2                                                                                   <---------At4g35610                                                                                 --------->RAP2.3(1)                                                                                ------>NtERF2           <---------ANAC58                                                    --------->DEAR3(1)           <---------ANAC58                      ----------->RAV1(2)           ------->GAMYB     --------->YAB1                              --------->ZAT2               --------->DEAR3(2)    <---------YAB1                          <-----------------AGL2          <---------ALFIN1   <-----------GT1                          <-----------------AGL1<-------TEIL--------->MYB46(3)  --------->YAB1                        <------------CBF          *TSS     <---------MYB52(2) <---------YAB1                        --------->ATHB51         <---------GLK1(2)--------->DEAR4(2) -------HAHB4                          <---------ICU4 <---------ANAC58     --------->MYB46(3)   <---- ------->YAB1                          --------->ATHB12         --------->ARR14(2)--------->RAP2.3(2) ---------->AGL15                     <---------YAB1  <---------ANAC58   --------->ZAT6 <---------YAB1 -------YAB1 ---------->ID1 <---------MYB52(1) <---------ALFIN1 <---------ARR14(2)--------->DEAR3(1)   attattatcattttcgtccctcaagtttcccttaagtcacattattgccccatctggcttccctcagattcacttccactaccgccgcttctcattctct  3328100                                        --------->HSFB2a(2)                              --------->ARR14(1)                             <---------ARR11(3)                             --------->ARR14(2)                      --------->At4g35610                    <---------ANAC58    ------>ZmHOX2a(1)                    <---------ANAC58    <---------HSFB2a(2)             <---------ATHB12<---------ARR14(2)        --------->TOE2(3)    <---------GLK1(2)            <---------GLK1(2)           <---------MYB52(1)        --------->YAB1<---------At4g35610   --------->ARR14(2)                       ================     --------->WOX13(1)    ----------->ARR10<---------ARR14(2)  <-----------GT1      <-------GAMYB  < ------DOF2--------->WOX13(1)--------->ARR11(3) ------>ZmHOX2a(1)           <---------MYB52(1)     --   ttctcgtcaatctcaatcaatggcttctgaagatactctctcctcgaatcctctattgcagaattttgacttccctccgtttgactccgttgatgctcac  3328200                  --------->ZAT14     --------->SPL7               <---------ANAC58 <---------ZAT2               <---------ANAC58 --------->At4g35610              <-------TEIL   <---------At4g35610                 --------->ATHB12            <---------ARR14(2)  --------->ZAT2                   --------->YAB1            --------->ARR14(2)  <---------At4g35610              <---------ICU4       --------->TOE1(2)     --------->At4g35610                <---------YAB1       <---------LBD16       <---------ZAT2                     <------ZmHOX2a(2)      =========================MYC_MYB<---------TOE1(2)      --------->LBD16      <---------TGA1a <-----------RAV1(1)      <----------DOF2  <---------ATHB12<<<<<<<<<TBF1 ===============MYC_MYB<-------GAMYB  <---------TOE2(2)<---------YAB1         <---------------------- -----------HVH21 <---------ZAT14   <---------SPL7 <----------DOF2 <---------YAB1  <<<<<<<<<TBF1 ------->bZIP60(2)--------->ZAT18 <---------------AtSPL3--------->YAB1      <-----------GT1        <-   catgtcagacctgggattcgtgctctgttgcagcagctcgtacgtttctctttctttatcatcccgatcattgttgtttttcttcttcttctattggact  3328300                                                                                           <---------At4g35610                              ----------->GT1                                              --------->ZAT2                   <---------TOE1(2)                                                       <---------ZAT2                  ------>ZmHOX2a(1)                                                        --------->At4g35610                 --------->TOE1(2)                                                      <------ZmHOX2a(1)              <---------ARR11(3)             <-----------ARR10                        --------->LBD16              --------->ARR11(3)          <---------ANAC46 --------------->AGL15     <---------LBD16 --ANAC81    --------->YAB1<---------GLK1(2)<---------CCA1(2)    <---------ANAC46    --------->HSFB2a(2) --------ANAC46 ------>ZmHOX2a(2)    <-----------RAV1(1)  ----------------->AGL1     <---------HSFB2a(2)   tgtgtattgtttctatgatcctatgaacagattagtaaaatgttgcatatattagctattgccatttgtgtgaaacgattttttcttccaggaagctgaa  3328400                                                                                            ---------                                                                                     <---------LBD16             --------->DAG2                                             <---------MYB52(1) --------->ICU4            ---------->DOF2                                          ------>ZmHOX2a(2)    <---------KAN4(2)     --------->At4g35610                                          --------->ATHB12<---------ANAC46 --     --------->ZAT2       <-----------HVH21                   --------->ATHB12 <---------MYB52(1) <--  <---------At4g35610     <---------RAP2.6(3)                <---------YAB1  <-----------RAV1(1)-----   ttggagcagctagaaaaagctgtagagccttcatggccaaaactagtggagccattagagaagattattgatcggttatctgttgtttggggaatgatca  3328500                                   <---------ZAT2                                   --------->At4g35610                                   <---------At4g35610                                <---------ANAC58                                <---------ANAC46                                <---------ANAC58                               <-------TEIL                            --------->ZAT2                       <---------AHL20(2)                            <---------At4g35610                 <---------YAB1                            <---------ZAT2                  <---------GLK1(2)                       --------->TGA1a                      <---------ARR11(3)                      -                       <---------TGA1a                      --------->ARR11(3)                  -----                       ===========================================MYC_MYB                      <-----           <-----------HVH21--------->At4g35610           <-------TEIL                         ------      <---------TOE2(3)--------->ZAT2                     ----------->ARR10                  <------- >YAB1<---------TOE1(3)<---------ZAT2                    <--------P                       --------->At4g35610 ------->YAB1          ----------->RAV1(2)            <---------TOE2(3)                   <---------At4g35610 -------ATHB12       <---------ALFIN1 ------>NtERF2   <---------TOE1(3)                  <XXXXXXXXXXX ---->WOX13(1)   <------ZmHOX2a(1) --------->ZAT2    <-----------RAV1(2)              <-----------GT1   atcatcttaaggctgtcaaggacacacctgagcttcgtgctgccattgaagaagttcaggtagatttttatttgtattgccaagtttttctctgctcatg  3328600  Previous    Next  AGI:  At5g10540.1    Description:  peptidase M3 family protein / thimet oligopeptidase family protein. similar to peptidase M3 family protein / thimet oligopeptidase family protein [Arabidopsis thaliana] (TAIR:AT5G65620.1); similar to hypothetical protein OsJ_008669 [Oryza sativa (japonica cultivar-group)] (GB:EAZ25186.1); similar to oligopeptidase A [Medicago truncatula] (GB:ABY48141.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN62794.1); contains InterPro domain Peptidase M3A and M3B, thimet/oligopeptidase F; (InterPro:IPR001567) Range:  from: 3328066    to: 3334972    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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