Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100            --------->At4g35610                                     <----------DOF2          <---------At4g35610                                    <---------DAG2         ----------->RAV1(1)                               <---------ICU4       <---------At4g35610                                 --------->YAB1              --------->TOE2(3) ---------ARR11(3)                                        <---------YAB1             --------->ARR11(3) -------->ARR14(2)                                      --------->YAB1               <---------ARR11(3) -------->ARR11(3)     --------->YAB1                  <---------YAB1            ---------->DOF2 ---------ARR14(2)  ------>ZmHOX2a(1) <xxxxxxxxxxxxxxxxsmallRNA(le3)         --------->ANAC58 --ZAT2--------->At4g35610  --------->At4g35610   ------->TEIL<-----------GT1--------->ANAC58   ggtatcttcagcagcagttttcctctcatcaccagacttaaactcagccatgtaccgatgataatcacctttcatcttcaagtaaaagaccttagactca  3285900                                                                                                   --                   --------->At4g35610                                                    --------->ICU4                   <---------At4g35610                                            <---------AGP1   --                 <-----------RAV1(2)                                              <---------ARR14(2)                <------ZmHOX2a(2)              --------->LBD16                    --------->ARR11(3)                ================================HOX2a_HOX2a                       --------->ARR14(2)         --------->At4g35610                  <---------HSFB2a(2)                 <---------ARR11(3)      --------->At4g35610                 <xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)   --------->AGP1   --      <---------At4g35610                <------ZmHOX2a(1)      --------->At4g35610 ------>ZmHOX2a(2)      <---------ZAT2   <---------ANAC58<---------TOE1(3)        <---------At4g35610<------ZmHOX2a(2)     ----------->RAV1(1)   --------->WRKY18(1)--------->HSFB2a(2)            <----------DOF2---------     ========================RAV  --------->At4g35610--------->MYB52(1)      ========================    <-----------RAV1(2)<---------ANAC58<---------TOE2(3)     ---------->DOF2 --------->TOE2(3)-------   ctcgctccagcagatgggatcagatgcgagtcaaggagcttaaggattccagagcaaacagaagaaagctcagactcaactttagatctgtaatccttga  3286000                                                                                ------>ZmHOX2a(2)                                                                               --------->ARR14(1)                                                                               <------ZmHOX2a(2)                                                                               --------->CCA1(2)                                                                               ======================                                                                              --------->ARR14(2)                                                                              <---------ARR14(2)                                                                              --------->ARR11(3)                                                                        --------->REM1(2)                                                                       <------NtERF2                                                                     <---------ANAC46                                                                    <------NtERF2                                                                    --------->ATERF1(1)                                                                   <---------RAP2.3(1)                                                                   <---------ORA47(2)       <-------MYC3                                                <---------ATERF1(1)       ------->MYC2                                                ------>NtERF2=====================       <-------MYC2                                                <---------RAP2.6(1)       ------->PIF4                                                <---------RRTF1(1)       <-------PIF4                                                <---------DEAR4(2)       ------->MYC3                                                <---------ERF1       <-------PIF5                                               <---------RAP2.3(3)       ------->MYC4                                               <---------RAP2.3(2)       <-------MYC4                                               <---------RRTF1(3)       ------->PIF5                                               <---------RRTF1(2)      <---------ANAC55(2)                                         --------->ATERF1(2)      --------->O2                                                <---------DEAR3(1)      --------->ANAC55(2)                                         <---------ATERF1(2)      <---------O2                                                --------->ALFIN1      <---------TGA1a                                            <---------ABI4(1)     --------->ANAC55(2)      --------->TGA1a                                         <-----------RAV1(2)   <------ZmHOX2a(2)     ------------>OsbHLH66                                  ==========================HOX2a_HOX2a    <---------ALFIN1                                        ===============================HOX2a_HOX2a    <------------OsbHLH66                                <------ZmHOX2a(2)    <---------ARR11(3) ----------->HVH21                                      --------->ARR14(2)    --------->AGP1        - ------->ANAC58                                         <---------ARR11(3)   --------->GLK1(1)   ---- ------->ANAC58                                         <---------ARR14(2)  ----------->ARR10    ---- ------->ANAC46                                       --------->ANAC58 <---------ANAC46<---------ANAC55(2) >TOE2(3)                              --------->At4g35610  ===========================HOX2a_HOX2a  - ===============bZIP_DOF------>ZmHOX2a(1)             --------->ANAC58------>NtERF2 ================= ---->HVH21   ---------->ID1           <---------At4g35610  ------>ZmHOX2a(1)<---------GLK1(1)   ----   caagcgacacgtgctcgtcgttcttcctactctcttccttctgctcaatcgaagacacgatcctccaggcggcgcgtagagatccgatcacgtttttgta  3286100           --------->HSFB2a(1)           <---------HSFB2a(1)         <------ZmHOX2a(1)   ------->GAMYB ------>ZmHOX2a(1) ===============HOX2a_HOX2a             --------->At4g35610 ===============HOX2a_HOX2a             <---------At4g35610 -------->MYB52(1)              <---------At4g35610                                                 < ----->ANAC46--------->GLK1(2)<---------ZAT18                                                      <- ----->ANAC58<---------ARR14(2) --------->At4g35610                                              <--- ---------->RAV1(1)         <-----------HVH21                                      <---------CCA1(2)- ===============HOX2a_HOX2a------->GAMYB--------->LBD16                         --------->MYB46(3) -- ----->ANAC58--------->ARR14(2)----------->ARR10    ----------->RAV1(2)       <-----------GT1  ------   agcaacagagaggagattcctctcttcaacggtgagctcttccgctggagtagcgcctgtaacgagctgttccatgaattgaaccatctcttcgtaacgc  3286200                                                       <------NtERF2                                                     --------->RAP2.3(2)                                                     --------->DREB2C(2)                                                     --------->RAP2.6(2)                                                     <---------ATERF1(2)                                                     --------->ATERF1(2)                                                     --------->RRTF1(2)                                                     --------->RAP2.3(3)                                                     --------->ANAC46                                                     --------->RRTF1(3)                                                     --------->DEAR3(1)                                                    --------->RRTF1(1)                                                    --------->ORA47(2)                                                    --------->RAP2.3(1)                                                    <------NtERF2             <---------ZAT2                         --------->ATERF1(1)       <---------DEAR3(1)                           --------->DEAR4(2)    --------->ZAT2                                  --------->ERF1    <---------ZAT2                                 <---------RRTF1(1) ----------->RAV1(2)                               ------>NtERF2 ---------ATERF1(1)                                <---------RAP2.3(1) --------ALFIN1                                    <---------ATERF1(1) ------ATERF1(1)                                  <---------DEAR3(1) ----->NtERF2--------->ZAT2                     <-----------HVH21 ------->DEAR3(1)      --------->REM1(2)       <-----------RAV1(1)             --------->CCA1(2)<---- ->GAMYB <------NtERF2--------->AtLEC2   ------>NtERF2------>NtERF2 ---------->DOF2   <---------AHL20(2)   tccgcctgctcggcgagcttcgccatgtacacatactggtctctgcctaatgtcgccgccattagagagagaaagagagagatttgatttttttttgttt  3286300                                                                         <---------AHL20(2)                                                                 --------->ZAT18                                                                --------->ALFIN1                                                              --------->O2                                                              --------->TGA1a                                                              --------->ZAT2                                                              <---------TGA1a                      --                                                              <---------O2                         --                                                              --------->At4g35610                  --                                                            <-----------RAV1(2)                   ---                                                     ===================bZIP_DOF                  <--                                               --------->DAG2 <---------At4g35610                 <--                                              ---------->DOF2 <---------ZAT2                      <--                             ===========================================bZIP_DOF                  ---                             ---------->DOF2  ==========================bZIP_DOF                  ---                        ------------------------>ANAC81   <-----------HVH21                      ----  ----------->GT1      ---------->DOF2  >>>>>>>>>TBF1---------->DOF2    --------->AHL20(2)     <----- -----AHL20(2)    *TSS =================================================bZIP_DOF     ------->TEIL----   aatggggaaaatttgaagaaaatgggaaagagaaagagagaagaagaataaagggcaaagagtcaggtgggctattaaaaatagatgtatattaaaccca  3286400                                                                                              <------MYB46(1)                                                                                           <-------GAMYB                                                                                          <------MYB83 ------->ANAC58                                                                           <------MYB46(1) ------->ANAC46                      <---------TOE2(3)                          <---------ANAC58 ------->ANAC58                  <-------GAMYB                                  <---------ANAC46 ---->MYC3                     <---------ANAC58                                 <---------ANAC58 -----MYC3                     <---------ANAC58                  <---------ANAC46         --------->ATHB12 -----PIF5                     <---------ANAC46                  <---------ANAC58   --------->ALFIN1 -----MYC2--------->ZAT18     <------NtERF2                      <---------ANAC58 --------->ALFIN1 ---->MYC2<---------ZAT14   <---------DEAR3(1)                <------ZmHOX2a(1)<------NtERF2<--------P ---->PIF5<---------ZAT18   <XXXXXXXXXXXXXXXXXXXXMIR4228<---------ZAT6    <-----------RAV1(1) <------MYB83 ----->ANAC58            --------->ANAC46          <---------ANAC58   <---------ANAC46    <---------MYB46(3) ----ALFIN1              ----------->HVH21         <---------ANAC46   <---------ANAC58    --------->MYB55(2) ----->ANAC58 <----------DOF2------>NtERF2         <---------ANAC58   <---------ANAC58   <---------AtMYB61   cgcgcaagtgtgttcactttcgattatacgacggcgtttgatgttatagtctttcgtagagtgaggagcgtggtttgtgttggcgagtgggatggttggg  3286500                                                                                                    -                                                                                                   <-                                                                                          --------->ATHB12                                                                                     --------->GLK1(1)                                     --------->YAB1      <---------ZAT2 <---------ZAT6   <---------YAB1            <---------YAB1          <---------YAB1       <---------At4g35610         <---------GLK1(1) --------->ALFIN1                  <<<<<<<<<<GATA-1      --------->At4g35610---------->DOF2 <--------   agggtttggggtttgtgataagagcgagtgaatggacgataatagttttttagtgagtcagcttctagtcactagttttaaagtcagaactctgattggg  3286600                                                                       <---------MYB46(3)                                                                       <---------REM1(1)                                                                       <-----------RAV1(1)                                                            <----------DOF2                           --------->GLK1(1)               <---------DAG2                           - -------->ICU4          <---------YAB1                  --------->ANAC46                    <-------- ---------DOF2      <---------DAG2             ----------->GT1      <-----------RAV1(1)     <-------- -WOX13(1)          <----------DOF2  --------->ICU4     <---------ALFIN1       --------->AHL20(2)----   cctttattaggcctaatatgggccttatgaattccaatacttatgaagtttgtaatacacacctttttttttgttgttgcataaaatgcgaaaacttttt  3286700                                                                    --------->TOE2(3)                                                                   --------------->AGL15                       <---------AHL20(2)                          ----------------->AGL1                      --------->AHL20(2)                <---------TOE2(3)    --------->GLK1(1)                --------->ANAC55(2)                    ---------->DOF2       <---------GLK1(1)           --------->DAG2                            <---------YAB1<---------------AGL15           <---------------AtSPL8            --------------->AGL15<-----------------AG    ----------->GT1   <---------AHL20(2)     <----------DOF2      <-----------------AGL1 --------->DOF2 <---------ANAC55(2)    <---------ARR11(3)        <<<<<<<<<GT-1 -DAG2     --------------->AtSPL8      --------->ARR11(3)   --------->AHL20(1) <---------ATHB12    <- --DOF2   ---------->DOF2---------->DOF2     ======================================MADS_MADS       <- ----->TOE2(3) <-------TEIL     ---------->DOF2--------->AHL20(2)<-----------GT1                   <-   cttaaagagaaataaagtacataatttaaaagactaaagtatatattcttttaatattaaagtatattaaccaaaatggaaatcaatagttagtagtagt  3286800  Previous    Next  AGI:  At5g10450.1    Description:  GRF6 (G-BOX REGULATING FACTOR 6); protein phosphorylated amino acid binding. Identical to 14-3-3-like protein GF14 lambda (GRF6) [Arabidopsis Thaliana] (GB:P48349;GB:P42647;GB:Q9LX97); similar to GRF8 (GENERAL REGULATORY FACTOR 8), protein phosphorylated amino acid binding [Arabidopsis thaliana] (TAIR:AT5G65430.1); similar to 117M18_25 [Brassica rapa] (GB:AAZ66944.1); contains InterPro domain 14-3-3 protein; (InterPro:IPR000308) Range:  from: 3283854    to: 3286318    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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