Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100       ------>ZmHOX2a(1)    --------->TOE1(3)    --------->TOE2(3) <---------ARR11(3) --------->ARR14(2) --------->ARR11(3) <---------ARR14(2) ---------GLK1(1)                                                                  --------->ZAT2 -------->GLK1(1)                                                           --------->ANAC58 ------->ARR14(2)                           --------->ICU4                  --------->ANAC58   ------ --------ARR14(2)                        <------NtERF2              -------->P     --------->At4g35610 -->At4g35610                          <---------ANAC46             ------>MYB83 ---------->CDC5 ---At4g35610                 <---------ANAC58                      ------>MYB46(1)<---------At4g35610 -->ZAT2    --------->ICU4    <---------ANAC58                   --------->MYB46(3)<---------ZAT2 ---ZAT2    <---------YAB1    <---------ANAC46               <---------MYB52(2)  <-----------RAV1(2)   ggatatccttaggcatgatggtgaccctcttagcgtgaatggcgcaaagattagtgtcttcaaacaaaccaacaaggtaagcctcagcagcctcttgtaa  3269200                                      --------->GLK1(1)                                     ---------                             <-------TEIL                                                 <---------GLK1(2)                             ------>ZmHOX2a(2)                                        ===============                             =====================HOX2a_HOX2a                         <------ZmHOX2a(2)                            ======================HOX2a_HOX2a                        <---------ARR14(2)                            <------ZmHOX2a(2)                                     --------->ANAC55(2)                           <---------ARR14(2)                                     <---------ANAC55(2)                ----------->HVH21     <---------GLK1(1)   ------->TEIL           <---------LBD16            <---------ZAT14--------->AGP1              --------->ANAC46         --------->MYB52(1)       <---------ZAT14     <---------GLK1(2)           --------->ANAC58      --------->HSFB2a(1)       --------->ZAT14    <---------At4g35610          --------->ANAC58      <---------At4g35610      ------->GAMYB       --------->At4g35610          <---------MYB52(2)    <---------HSFB2a(1)     --------->MYB46(3)  ----------->ARR10    <---------At4g35610            --------->At4g35610   --   ----------->RAV1(1)--------->TOE1(3)    ------>ZmHOX2a(1)                 <---------HSFC1(2)    <- --------->At4g35610  --------->TOE2(3)  ----------->RAV1(2)                 --------->HSFC1(2)    <- ---->DOF2  --------->ZAT14--------->ARR14(2) --------->At4g35610     ---------->DOF2--------->ARR14(2)   agcagcaacagcactgctctgaaacctcagatccgtcttgaaatcctgagctatctcacgaaccagacgctggaaaggaagcttacggatcagaagctca  3269300                                                                                         <---------GLK1(1)                                                                                        <---------ARR14(2)                                                                                    --------->At4g35610                                                                                  <------NtERF2                                                                                 <------NtERF2                                                                                 --------->LBD16                                                 --------->GLK1(2)              <---------DEAR3(1)                                                <---------GLK1(2)              <---------LBD16                                         --------->HSFB2a(2)                  <------NtERF2         <                                ----------->RAV1(1)                          <---------MYB46(3)    <-                             --------->ANAC46--------->ANAC58                ------>NtERF2         --      <---------YAB1        --------->ANAC58 --------->ANAC46               ----------->HVH21     ---    <---------At4g35610     --------->ANAC58 --------->ANAC58               --------->ALFIN1 <------- <----------DOF2    ------>ZmHOX2a(2)    <---------HSFB2a(2)              --------->LBD16--------->GLK1(1) >At4g35610         ============================HOX2a_HOX2a             <---------LBD16 --------->ARR14(2) ======================HOX2a_HOX2a       ------>ZmHOX2a(1)         --------->ANAC46 <---------At4g35610 ------->ZAT14     --------->GLK1(1)    <---------LBD16         --------->ZAT14<---------ANAC46   --- --------ZAT18    <---------ARR11(3) --------->ARR14(2) <---------RAP2.6(2)<---------MYB52(1)<------- --------ZAT14  ------>ZmHOX2a(1)    <---------ARR14(2)<---------LBD16 ------>ZmHOX2a(1)<---------GLK1(2)   gtgctcttctgatacttcctgatctctctcaaggcaacagttcctggacggaatctatgcggcttcttcactcctccggtggccggagcagatttccttg  3269400         <---------ANAC58     <---------ANAC58     <---------ANAC58     <-------GAMYB    <---------MYB46(3)      <----------DOF2               <---------ANAC58 ------NtERF2       <---------ANAC58      <---------ARR14(2) --------RAP2.6(3)  <---------ANAC58      --------->ARR14(2) ---->NtERF2    <---------ANAC58     ------>ZmHOX2a(1)    <---------ANAC58 ------>RAP2.6(2)<----------DOF2   ----------->RAV1(2)<---------MYB52(1) --ANAC58<---------ANAC46  <---------ANAC58--------->GLK1(1)       --------->ANAC46 ------>DEAR3(1)<---------ANAC58  ------>NtERF2 ------>ZmHOX2a(1)  --------->ANAC58 --ANAC58<---------ANAC58  <---------ANAC58<---------GLK1(1)       --------->ANAC58   ---------->DOF2   ccgccttggttgcgagttgctttcttggtgctttgcctcctgtggatttcctcgcggtttgcttagtacgagccatttcgaaatcaaacaaagactaatc  3269500                         <---------ARR14(2)                        ====================================HOX2a_HOX2a                            --                        <------ZmHOX2a(1)                                                         <--          <-----------GT1--------->ARR14(2)               ------->GAMYB                           <--        <---------HSFC1(2)                            <---------WRKY12                           <---        --------->HSFB2a(1)                          <------ZmHOX2a(2)                     >>>>>>>>>SARD1        <---------HSFB2a(1)                         --------->ARR11(3)          <---------LBD16 <----        --------->HSFC1(2)                          <-----------ARR10     <---------------AGL15 <----   ============================HOX2a_HOX2a          <---------ARR11(3)    --------------->AGL15 <----   <------ZmHOX2a(2)  <---------ANAC46             *TSS  --------->ANAC46 <----------DOF2  >>>>>>>>>CBP60g   gaccgatcgaattttcttcttgtggaggatgcgaatgagaaattttgtagtgaagatcaacgcagaagagggactgcttttatggggagagaaatttggc  3269600    ----------->GT1  ----------->GT1  <---------ANAC46                                                                         <------ZmHOX2a(2)  --------->At4g35610                                                             --------->MYB46(3)  <---------At4g35610                                                           --------->MYB52(1) <---------AtMYB61                                                             <---------WRKY38(1) ------->ALFIN1                                                       <---------ICU4      <---------ARR11(3) ----NtERF2                                                           <---------AHL20(2)  --------->ARR11(3) ---------HVH21                                                    <---------AHL20(2)   ----------->ARR10 ------MYB46(3)                                                   --------->AHL20(2)--------->At4g35610 -----DREB2C(2)                                             <---------MYB52(1)<---------ATHB12 -----DEAR3(1)--------->TOE1(2)                            <-------GAMYB      --------->MYB46(3) -----ANAC46  --------->TOE2(2)          ---------->DOF2  <---------MYB46(3)--------->WOX13(1)   ----   ggtgaggtgaaaaaaacatgggagggagttttgtttttggagggaaagttgtattcttgtccgttggattaaatatttcaatcaacggctgagatcatca  3269700                                                           <-----------HVH21                                                         --------->LBD16                                                        <---------ANAC58                                                        <---------ANAC55(1)                                                        --------->ANAC55(2)               <---------ARR11(3)                       <---------ANAC58          <-----------HVH21                       ------>NtERF2                           ------>ZmHOX2a(1)        --------->LBD16                          --------->LBD16                     --------->YAB1       <---------ANAC58         <---------YAB1 <---------LBD16                  --------->AHL20(2)       <---------ANAC46        <---------AHL20(2)------>NtERF2                  <---------AHL20(2)       <---------ANAC58        --------->AHL20(2)--------->ANAC46              --------->AHL20(2) <--       <---------ANAC55(1)    --------->AHL20(2)<---------RAP2.6(2)       --------->MYB46(3)      <--       <---------ANAC55(2)    --------->YAB1   --------->RAP2.6(3)       -------->P <---------ATHB12 ------->GT1   --------->ARR11(3)            --------->GLK1(2)          --------->WOX13(1)<----------DOF2   ggtataaatccgtgtgagaccttatcaacgaattaaaatagactaaaattccggccatccgtgtcatttactatcaaccaatttaaatcatccttttcag  3269800                                          ------>NtERF2                                         --------->RAP2.6(2)                                         --------->ANAC46        <----------DOF2        --------->AHL20(2)    <---------TOE2(2)    --------->ARR14(2) --------->ANAC46        <---------ARR11(3) <---------O2            <---------ARR14(2) --------->O2            <---------ARR11(1)<------NtERF2 -------ZAT18--------->ANAC46  <---------AHL20(2)----------->GT1              --------->AHL20(2)   <- -------WRKY38(1)       <---------CCA1(2)<----------ID1         ----------->HVH21       --------->YAB1   tccacgtaggcttttgcgctacttccaaatcttttaattttaggcgccaaatcgaaaattttggctatgaagggtctcaaaaaaattcaatcgtagaaaa  3269900                                                                                               ------         <---------AHL20(2)                                                                    <-----         --------->AHL20(2)                                                             --------->ANAC58         --------->ATHB51                              --------->HSFC1(1)               --------->ANAC58         <---------ICU4                                <---------HSFC1(1)               --------->ANAC46        --------->ICU4                                 <---------HSFB2a(2)         --------->ARR14(2)        <---------AHL20(2)                             --------->HSFB2a(2)         <---------ARR14(2) <------ZmHOX2a(1)     --------->ANAC55(2)   <-----------GT1                       <-----------ARR10 --------TOE2(3)     <-----------GT1 ----------->RAV1(2)      <-----------GT1  <---------At4g35610  -   taaggatgaaattatttcaaaatttacataacaaatttagcctgaagttacaaatttcgagaaattacattactcttattcagcaaatctacgcattaag  3270000                 <---------ANAC58                 <---------ANAC58             <---------ARR14(2)   --------->AHL20(2)   --------->AHL20(1)   <---------AHL20(2)                                                                            <---  --------->AHL20(2)                                                                             <---  <---------AHL20(2)                                             <----------DOF2                 <--- <---------AHL20(1)         ----------->GT1      --------->GLK1(2)                              <---- ----->GT1  <------ZmHOX2a(1)          <------ZmHOX2a(1) <---------ARR14(2)              <----------DOF2 ----ANAC55(2)<---------GLK1(1)     --------------->AGL15--------->ARR14(2)          <---------MYB52(1) -------->YAB1--------->GLK1(1)     <---------LBD16--------->TOE2(2)        ---------->DOF2     <----   taaaataatttggaggatttcttactgtgatggtataaccaggaatagaacaatctgcgaattctcactttgattttgtaaagaaccgatacttttctta  3270100  Previous    Next  AGI:  At5g10390.1    Description:  histone H3. Identical to Histone H3.2 (HTR1) [Arabidopsis Thaliana] (GB:P59226); similar to histone H3 [Arabidopsis thaliana] (TAIR:AT5G65360.1); similar to histone H3 [Arabidopsis thaliana] (TAIR:AT5G10400.1); similar to histone H3 [Arabidopsis thaliana] (TAIR:AT3G27360.1); similar to Histone H3.2 (GB:P68427); similar to histone H3 (H3-1.1) (GB:AAA32655.1); similar to histone 3 (GB:AAA33907.1); contains InterPro domain Histone-fold; (InterPro:IPR009072); contains InterPro domain Histone core; (InterPro:IPR007125); contains InterPro domain Histone H3; (InterPro:IPR000164) Range:  from: 3268848    to: 3269551    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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