Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                      ------>ZmHOX2a(2)                                  <---------AGP1<---------MYB46(3)                                  <---------ARR14(2)                        <---------ANAC58        --------->ATHB12                        <---------ANAC58       <-------TEIL                                       <--            <---------ANAC46      --------->ARR14(2)                                      <---------WOX13(1) --------->ANAC58       <---------ANAC46      --------->ARR14(1)                       <---------TOE2(2) --------->ANAC58  --------->HSFB2a(1)     ----------->ARR10 --------->DAG2         --------->ANAC58 --------->ANAC46  <---------HSFB2a(1)<---------TOE2(3)     ---------->DOF2         <---------ANAC55(2) --->DOF2   <---------ANAC58      --------->ARR11(3)      --------->ARR11(3)        <---------O2  --- -DOF2      <---------ANAC58--------->ATHB12 <---------GLK1(2)    ---------->CDC5   --------->ANAC58<   gaaacgccaatatcgcttggaagattgcttcgattggatctaggttagattcgttggaaagataaagctcagggcttcaaatcgacacgtagattgactc  3251700                  <------NtERF2                 --------->LBD16                  --------->At4g35610                --------->LBD16           <---------MYB52(1)----------->HVH21      <----------DOF2               <---------WRKY12------->GAMYB           --------->ZAT6 -------CCA1(2) <---------LBD16     <---------WRKY38(1)------->TEIL        <---------YAB1 --->ZmHOX2a(1)<---------LBD16     --------->WRKY18(1)<---------GLK1(2)<---------ANAC58 ---------CCA1(2)------>NtERF2   --------->ANAC46 <---------At4g35610  <---------ANAC58         <----   ctatctctctttaactcgccgggaaactctcttccaagtcaaccgttttgacaactgaatctctgacctagaggcttatcagtagaaaatcagcgatatt  3251800                                                              <---------ANAC58                                                              <---------ANAC46               <-------                                                              <---------ANAC58               <-------                                                            <---------ANAC46             <-----------HVH21                                                          <-----------HVH21       <----------DOF2                                                        <---------MYB52(1)       <---------ANAC58                                                       <-------GAMYB             <---------ANAC58                             <------MYB46(1)      <----------DOF2              <-----------GT1                             <------MYB83       --------->HSFB2a(1)     ------->TEIL    --------->ANAC46                            --------->MYB59     <---------HSFC1(2)      --------->ARR11(3)   <------- ---TEIL            --------->CCA1(2)           --------->HSFC1(2)     <---------CCA1(2)--------->ZAT2   catcgaaagaattcacctatagagatgagataggtctctataaaactcgaagctttccgttgtcgcgtagattgtatcttgtttctttccaggtcgcttg  3251900                                   <---------ARR14(2)                                   --------->ARR14(2)                              <------MYB83                                <---------ANAC46                       ------>NtERF2                            <---------At4g35610                        <---------RAP2.6(3)                            <---------ZAT2                            ----------->HVH21                            --------->ZAT2 ----------->GT1            --------->DEAR3(1)                       <---------ETT(1)<-----------HVH21             --------->DEAR3(2)                       ----------->HVH21  >>>>>>>GRF7               --------->At4g35610                  <---------MYB46(3)--------->GLK1(1)            ---------->DOF2   <------MYB46(1) --ANAC58         <----------DOF2--------->LBD16              ---------->DOF2      ----------->GT1 --ANAC46  --------->MYB52(2)  <---------LBD16              --------->ZAT18       --------->MYB59 --ANAC58<---------MYB52(1) --------->At4g35610      <-----------HVH21--------->RAP2.6(2) <----------   gagtttgattcgtaagttggctgttccgacagctgcggatttgtcagggaaattgtgtcaagtgcaaagaagccgacctgtagataggtatatcactgcc  3252000                                        ----------->GT1                                   ----------->HVH21                                 <---------ZAT2                                 <---------At4g35610                              --------->LBD16                         <---------ARR14(2)                                   <---------ANAC58                --------->ANAC58 --------->ZAT2                --------->ATHB12                 -----                --------->ANAC58 --------->At4g35610          ----------->HVH21           --------->TOE2(3)         <---------ARR14(2)  --------->LBD16                  <---------YAB1  <---------ANAC46  <----         <---------ARR11(3) <---------HSFB2a(2)        <---------ANAC58       <---------ANAC58 <-----         <---------GLK1(2)<------ZmHOX2a(2)            <---------ANAC58    ------->PIF5 <---------TOE2(3)         --------->ARR14(2) --------->HSFB2a(2)        <------MYB46(1)     <-------PIF5<---------DOF5.7(2)        =========================HOX2a_HOX2a           <------MYB83<---------MYB46(3) <---------WRKY12 -GT1   <------ZmHOX2a(1)--------->ARR14(2)           --------->MYB59<--------P   <---------TOE2(3)   tagttcatcaggattttcaaggaaaacgatcccgaagctgactggttttatagagttgggtctcatgactggttgcacttgcttgaggtaaacgtttata  3252100                                                                          <-----------GT1                                                                   <xxxxxxxxxxxxxxxxsmallRNA(s)        <---------ARR11(3)                                     --------->LBD16            <---------ANAC58        --------->ARR11(3)                                    <---------ANAC46            <---------ANAC58       <---------CCA1(2)                ---------->DOF2      ------>ZmHOX2a(2)         --------->GLK1(2)  <---------At4g35610       <---------WRKY12                <------ZmHOX2a(2)          --------->GLK1(1) ---->ARR11(3)              <---------WRKY38(1)            <---------ARR14(2)         --------->ARR14(2) -----ARR11(3)         <XXXXXXXXXXXXXXXXXXXXMIR169G*       --------->ARR14(2)         <---------GLK1(2) ----CCA1(2)       <---------TOE2(3)  --------->LBD16     <---------GLK1(1)       --------->ANAC55(2)   tctcagcatatatcttcgattaaggcgaggtcaacttctccgaaaagacgactctctgggcgatccgtagatgtattaacccttacgagattccctgtga  3252200                 --------->LBD16                <---------ANAC46                --------->O2                <---------O2               <------NtERF2              ------>NtERF2             --------->PCF2             --------->PCF5        --------->ARR14(2)        <---------ARR14(2)       <---------GLK1(1)       --------->GLK1(1)<---------At4g35610                          <---------HSFB2a(2)    <------NtERF2<-------PIF5                             --------->ARR11(3)   --------->HSFB2a(2)  --------->ZAT2    <---------ARR14(2)        <---------LBD16   <---------HSFB2a(2)  --------->At4g35610 <-------TEIL  <---------ARR11(3)  --------->ETT(1)      <---------ZAT2    <---------GLK1(2)<------ZmHOX2a(2)  <---------ANAC46--------->ALFIN1        --------->ARR14(2)------>ZmHOX2a(2)  <---------LBD16------->PIF5  --------->KAN4(1)      ---------->DOF2--------->HSFB2a(2) --------->TOE1(2)   tttgtcgggaaatcggccccgtggtgagctggattattcagacggattcgtagttctaaagatcgcatcttctggatagaagcagggataacattcgata  3252300                                   --------->At4g35610                                   <---------At4g35610                                   --------->ANAC55(2)                                   --------->O2                                   <---------O2                                   --------->TGA1a                                   ----------->RAV1(2)                           --------->HSFB2a(2)                           <---------HSFB2a(2)                        <----------DOF2                        =====================bZIP_DOF                      <---------At4g35610                  <-----------HVH21<---------ANAC55(2)                 <---------bZIP60(1)                                           --------->GLK1(2)     ----------->HVH21--------->At4g35610                                     <---------GLK1(2) <---------At4g35610  <---------ZAT2                                       <---------HSFB2a(2) --------->At4g35610<---------WRKY12               --------->GLK1(2)       --------->HSFB2a(2) --------->ZAT2  --------->bZIP60(1) ----------->HVH21                     --------->HSFC1(1)-------- <---------ZAT2 --------->MYB59  <---------ALFIN1 --------->GLK1(1)       <---------ANAC46   <-------   gacagctctgatggaagtgaggtcagcttctagggacacctgactcgctggaaaatccatagatgtgctactagtttcgagaatcgttgagacttgtggg  3252400                                                                                                    <                                                                                                   --                                                                                             <-------                                           <-----------HVH21                                 --------                                    <---------GLK1(2)                                        --------      ------>ZmHOX2a(2)             <---------ARR14(2)        --------->At4g35610           ---------      ====================================HOX2a_HOX2a      <---------At4g35610              <-------- ->ALFIN1   --------->At4g35610    <------ZmHOX2a(1)       --------->At4g35610     <---------LBD16 <- --ANAC46   <---------At4g35610---------->DOF2            ------->TEIL      <---------ARR11(3)-------   ggaattgatccctaagatgactagtcttcttaagaaaggattctatgtcaaacgagattgcatctgcagaaacatggagataattctcggatgagatatc  3252500                                               --------->LBD16         --------->MYB111(1)      -------->P  <---------ANAC58         --------->MYB111(2)     ------->GAMYB<---------ANAC55(2)         <---------MYB46(3)      --------->MYB55(1)         --------->MYB52(2)     --------->MYB46(3)         --------->MYB46(2)     <---------MYB55(2)                                 <---------AHL20(2)        <--------P            --------->MYB52(1)                                   --------->AHL20(2)      ----------->GT1      --------->At4g35610<---------ANAC58                    <---------AHL20(1) ------>ZmHOX2a(2)         <---------At4g35610<---------ANAC46                    --------->AHL20(2) ------ZmHOX2a(2)         --------->ANAC58 <---------ARR14(2)                     --------->AHL20(1) ------->ARR14(2)         --------->ANAC58--------->GLK1(1)                       <---------AHL20(2) --GLK1(1)              ---------->DOF2   --------->WOX13(1)                  <---------AHL20(1) ->GLK1(1)           --------->LBD16      <---------GLK1(1)                   --------->AHL20(2) ->CCA1(2)          --------->LBD16  --------->LBD16                          --------->AHL20(1) >ARR11(3)          <---------LBD16 ------->GAMYB                             <---------AHL20(2) -ARR11(3)         <---------ANAC46<---------LBD16                           --------->AHL20(2) <---- --------ARR14(2)  <---------LBD16--------->MYB52(1)                         <---------ATHB12  <----- -->MYB52(1)   <---------GLK1(2)<---------MYB111(2)                    ----------->GT1  <-----------GT1   ggatcgaagggtagttagattccctggaaagctaacaaccggggcaatccgtgaacatattaaacaaatggggaagtcaataaatttattttacattata  3252600  Previous    Next  AGI:  At5g10336.1    Description:  unknown protein Range:  from: 3251944    to: 3252066    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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