Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                        --------------->AGL15                      <---------------AGL15                      --------->TOE2(3)           --------->YAB1---------->DOF2           >>>>>>>>>RAP2.2      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) ----->AHL20(2)      <-----------------AGL1 ------AHL20(2)      --------->At4g35610 ------AHL20(1)      ----------------->AGL1                                      <---------GLK1(2) ----->AHL20(1)      <-----------------AG               <xxxxxxxxxxxxxxxxsmallRNA(i) ---->AHL20(2)   --------->ARR11(3)            --------->At4g35610           ---------->DOF2 -----AHL20(2)  <---------ICU4                --------->ANAC58          ----------->GT1 >AHL20(2) --------->TOE2(3) ----------->GT1  --------->ANAC58     --------->ALFIN1   aaattcaatgcaatctaaatatcacctcaaagggtaaaattggctgataagcagccaattgtctcaaatgtggacggataaaagagtctcccatagttat  3249700                    <---------ALFIN1                   <---------ZAT18                   --------->ZAT14                   <---------ZAT14                     --------->ARR14(2)                --------->ZAT2                         <---------ARR14(2)                --------->At4g35610                 <---------ANAC46                <---------ZAT2                      --------->ANAC55(2)                <---------At4g35610                 --------------->AGL15           --------->ETT(2)                         <---------ANAC55(2)                          ----       <-------TEIL--------->ZAT18                 ----------------->AGL1                       <----     --------->ARR14(2)                            <---------LBD16                              -----     <---------ARR14(2)                   <-----------GT1      ---------->DOF2                  -----     <---------GLK1(2)            --------->At4g35610--------->LBD16        ---------->DOF2     <----   attcttggattcgtctacagctgcacttgaagactgagcacaataaaccctattccggattgagcaaaagggtttcttcaaagctcgagactttcgaaga  3249800                                                                           <---------CCA1(2)                                                                           --------->GLK1(1)                                                                        --------->LBD16                                                                  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                                  --------->ARR14(2)                                                               <---------ANAC58                                                               <---------ANAC58                                                        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2) ----->CCA1(2)                                      --------->MYB46(3)<---------At4g35610 -----ARR11(3)                                     --------->ANAC58   <---------LBD16 ---->ARR11(3)                                     --------->ANAC58 <---------RAP2.3(3) ---->ARR14(2)                              --------->YAB1     <---------ANAC46---------->DOF2 -----ARR14(2)                  --------->ZAT18    --------->ANAC46 <---------DEAR3(1)      ---------   tttgactctgaagaatgaatagagaacgatggagagccctgaacattgatcacacccatcagttttcgtgtctgcgcatatcaaaggtggaatcagttca  3249900                                                          ---------->DOF2                                                        ----------->HVH21                                                       --------->TOE1(3)                   ------->TEIL                <---------ANAC55(2)              --------->At4g35610              --------->ANAC55(2)        <---------HSFC1(2)                     --------->ANAC58        --------->HSFC1(2)                     ----------->GT1           --------->ALFIN1     <------ZmHOX2a(1)  --------->ANAC46       --------->ANAC55(1)   <------ZmHOX2a(1)      --------- >At4g35610----------->RAV1(2)  <-----------GT1--------->ANAC58----------->HVH21   ----------->GT1   atctagaggaaacatctgatgcacatactcaatttcacatcttattgacaagtaatacctgaaagttgacaggaagaggggcaaatggagataaccctaa  3250000                 --------->ZAT2                 <---------At4g35610                 --------->At4g35610                                              <---------ANAC46                 <---------ZAT2                                                   <---------ANAC58            <---------ANAC58                       --------->HSFC1(2)             <---------ANAC58            <---------ANAC58                       <---------HSFC1(2)            <-------TEIL        <---------HSFC1(2)                      ===================================bZIP_DOF         <        --------->HSFC1(2)               <------ZmHOX2a(2)                 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)        <---------HSFB2a(1) <---------ZAT14     ---------->DOF2          <---------TGA1a ---------->DOF2 >TOE1(3)   <---------ANAC46---------->DOF2--------->WOX13(1)            ===========================bZIP_DOF   gtagacgagaagggtcgtgagcagggagactaaagtgactgagatcagtcaaaagcttcggtttttctatgactcacttgcgattcgtggacaaaggtga  3250100                                       *TSS                                  <-----------------AGL2                               <---------SPL7                              <---------ANAC58                              <---------ANAC46 <---------GLK1(1)                  --------->GLK1(2)                              <---------ANAC58---------->TaMYB80                  <---------ARR14(2)                             <---------------AtSPL8                              <---------ARR14(2)                  xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) <------------CBF  --------->ARR14(2)                ----------->HVH21 ----------------->AGL3        <xxxxxxxxxxxxxxxxsmallRNA(i)            <---------YAB1   --------------->AtSPL8 --------->LBD16      <---------ARR14(2)      <---------AHL20(2)     --------------->AtSPL3--------->ANAC46    --------->LBD16 ----------DOF2<---------WOX13(1)<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)<---------LBD16     --------->ETT(2)   gccttttttttattctgagtgactgagaattggcgtaccaatttaggggttatccgaaattgaatccaaaacccggttctgaagaatcgggtcgatagtg  3250200                                                                           <-----------HVH21                                                                          <------MYB83           xxxx                                                                          <------MYB46(1)       =====                                                                         --------->MYB59        <----                                                                =================MYC_MYB    <------NtERF2                                                                <---------O2               --------->LBD16         ---------->DOF2                                        <---------ANAC58           ------>NtERF2       --------->ANAC58                                         --------->TGA1a  ====================       --------->ANAC58            --------->AHL20(2)           <---------TGA1a  <------ZmHOX2a(2)   <------MYB83                   --------->AHL20(2)            =====================================   <------MYB46(1)         ----------->GT1                      --------->O2   --------->At4g35610  -   ----------->GT1         <---------ZAT6                       --------->ANAC55(2)       --------->LBD16  --------->MYB111(1)    <---------ANAC46                       <---------ANAC55(2)       <---------LBD16  --------->MYB46(2)   <---------ZAT14            ----------->HVH21     <--------P       <---------LBD16  --------->MYB59      --------->ZAT14====================================bZIP_DOF   <---------GLK1(1) <--------P            --------->ZAT18---------->DOF2           <---------ANAC58--------->AGP1 <xxxxx   agagtaggtaagaaagtcttccaagtgtagtgttaaataaaaaagtctactcttgacgaggtgaagacgtgagagtaggtcagatcgatttcccggcgat  3250300                                                                                     <---------ZAT2                                                                                     --------->ZAT2                                                                                     --------->At4g35610                                                                               --------->ALFIN1                      <---------ALFIN1                                        <-------PIF5                  <------ZmHOX2a(2)                                           <-------MYC2                 <---------ARR14(2)                                           ------->MYC2                 --------->ARR14(2)                                           ------->MYC3                <---------RAP2.6(3)                                           ------->PIF5           ===============HOX2a_HOX2a                                         <-------MYC3           <------ZmHOX2a(1)                <---------O2                     --------->ANAC55(2)           <xxxxxxxxxxxxxxxxsmallRNA(s)     <---------ANAC46                 <---------O2           ==============HOX2a_HOX2a        <---------ANAC55(2)              --------->O2         <--        <-----------RAV1(2)                 <---------TGA1a                  <---------TGA1a      <-- xxxxxxxxxxxxxxxx>smallRNA(le3)  <---------bZIP60(2)                         --------->TGA1a  ------>ZmHOX2a(2) =================HOX2a_HOX2a    <---------ANAC46                       <---------ARR14(2)   <------- --ZmHOX2a(2) <------NtERF2   ----------->TGA1                          --------->ARR14(2)   <------- =================HOX2a_HOX2a ----------->HVH21                        ==============================HOX2a_HOX2a ==========bZIP_DOF------>ZmHOX2a(2)        --------->O2     ----------->GT1 <---------ANAC46-------- --------->DOF2----------->ARR10 <---------O2 --------->ALFIN1         <------ZmHOX2a(1)    --------- xxxxxxxxxxxxxxxsmallRNA(se3)<-----------HVH21----------->HVH21   --------->CCA1(2)  <---------At4g35610   ctaaaaggaaccaggagccgatctgcacatcggtgacgaggtgaagacgtgaagcctatgggaatgtgatacaggattcacgtggtgagctggtgatctg  3250400                                                       --------->At4g35610                                                    <---------ANAC58                                                    <---------ANAC58                           <-----                                               <---------At4g35610                             <-----                                               --------->At4g35610                         <---------YAB1                                               --------->ZAT2                           <---------YAB1     <------NtERF2                        <---------ANAC46                              <---------MYB52(1) <---------At4g35610                 <---------ANAC55(1)                               <-------GAMYB- --------->At4g35610                 <---------ANAC58  <---------ZAT2                 ------>ZmHOX2a(2) --------->ZAT2                      --------->ANAC55(2)                              ----------->GT1 <---------ZAT2                      <---------ANAC58  --------->ZAT2           ------->GAMYB<------- -------ANAC58                       <---------ANAC46  <---------At4g35610   --------->MYB52(1)<----- -------ANAC58                 ---------->DOF2 <---------bZIP60(2)           <---------DOF5.7(2)  <-- --bZIP60(2)                --------->ANAC58   <---------ZAT2              --------->DOF5.7(2)<------ --At4g35610                --------->ANAC58 --------->ZAT18             <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) ->At4g35610  --------->bZIP60(1)    <---------ANAC55(2)   <------NtERF2 <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) >ARR11(3)    <---------bZIP60(1)   <-------TEIL   <------NtERF2        ------->TEIL <------ZmHOX2a(2)   gcgagctggcaatgtgaagtcagggatgttaagcaaagtacgtgttgtgagctggcgagctggcaatacaaatggacgttaacggcgatcgttattaacg  3250500      --------->DOF5.7(2)     --------->TOE2(3)   <---------TOE2(3)   <---------TOE1(3)  <---------DOF5.7(2)                                                                         <<<<<<<ZML2 ----ANAC58                                                                                --------->HSFC1(1) ----ANAC46          <---------DAG2                                <---------KAN4(1)       <---------HSFC1(1) -------->DOF5.7(2)  <----------DOF2                               --------->KAN4(1)       --------->HSFB2a(2) ----GT1            <---------DAG2                                <---------KAN4(2)  --------->ARR14(2) ----ANAC58    <----------DOF2                        <----------DOF2--------->GLK1(2)     <---------HSFB2a(2) -------MYB46(3) <-----------GT1             <---------YAB1<---------YAB1            <---------GLK1(1) ---TOE2(3)<----------DOF2          ----------->RAV1(1)  --------->YAB1              --------->GLK1(1)   tggttaacgtttactttctttacctttttgtataagagcaacatgttatgctcatgctttcattatcgaataatctgtaatcttcagaattctctagaac  3250600  Previous    Next  AGI:  At5g10330.1    Description:  EMB2196/HISN6A/HPA1 (EMBRYO DEFECTIVE 2196); histidinol-phosphate transaminase. Identical to Histidinol-phosphate aminotransferase, chloroplast precursor (HPA2) [Arabidopsis Thaliana] (GB:Q949X3;GB:Q6S4C1;GB:Q6S4D6;GB:Q9LD56); similar to histidinol-phosphate aminotransferase, putative [Arabidopsis thaliana] (TAIR:AT1G71920.1); similar to histidinol-phosphate aminotransferase, putative [Arabidopsis thaliana] (TAIR:AT1G71920.2); similar to Histidinol-phosphate aminotransferase, chloroplast precursor (Imidazole acetol-phosphate transaminase) (GB:Q9FEW2); similar to Histidinol-phosphate aminotransferase, chloroplast precursor (Imidazole acetol-p Range:  from: 3247861    to: 3250139    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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