Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                            <----------DOF2                       <---------ARR14(2)                       --------->ARR14(2)                       <---------ARR11(1)                       ------->TEIL                      <---------ARR14(1)                    --------->ANAC46 ----------->RAV1(1)                    --------->ANAC55(1)                                             ----------->RAV1(1)                    --------->ANAC55(2)                                        --------->RAP2.6(3)                    <---------ANAC55(2)               <---------YAB1 --------->AtLEC2  ------->GAMYB --GT1<----------DOF2 <---------CCA1(2)      <-----------GT1 <----------DOF2  <---------WRKY18(1)   -   ccccttctctttcattgtccatacgtatctttttgagagccacaatttcaccagttttgatttctttagccatgtaaacttgactgcaacagcaaaacaa  3224400                                                                                         --------->WOX13(1)                                                                                       <---------YAB1                                                                                    --------->AHL20(2)                 --------->ANAC46                                                --------->ATHB51                 --------->ANAC58                                                <---------ICU4               ---------->DOF2                                                   <--------ATHB1             ------>ZmHOX2a(1)                                                   --------->AHL20(2)       --------->ARR14(2)                                                        <---------AHL20(2)      <---------CCA1(2)                                   --------->YAB1        --------->ICU4  -----    --------->YAB1       ----------->RAV1(1)             <<<<<<<<<ARR2          <---------ATHB12-----   <<<<<<<<<ARR2 --------->ANAC58                 --------->YAB1       ---------->DOF2<-----------GT1 --------->WOX13(1)     --------->ANAC46         <---------ATHB12   <----------DOF2 <---------AHL20(2) -------->MYB46(3)  ----------->RAV1(1) ---------->DOF2  <---------ATHB12       <---------ATHB51-----   caacaatcaaatctcctaaaagcaacacaacataggcattgtaaaagcctaatcatacaatcaaaaatcgcttcaaaggccaataatttatcaatcccaa  3224500                                                             --------->LBD16                        -                                                            --------->ANAC58                        -                                                            --------->ANAC55(1)                    --                                                            --------->ANAC55(2)                 -----                                                 ----------->GT1                                -----          <---------DAG2                        --------->DAG2          --------->REM1(1)       ----- --------->ICU4                          ---------->DOF2    <---------ANAC55(2)               ------- ---->ANAC58               ----------->GT1     ---------->DOF2<---------MYB52(1)            --------- ---->ANAC58           ---------->DOF2  --------->AHL20(2)  --------->ANAC58                <-------- ------>GT1<----------DOF2--------->DAG2<---------AHL20(2)  --------->ANAC46            <---------GLK1(2)   gtaaaaattaagccttttgaataaccaaagagtgaaattgaattaaagagaaagtgaataacccgtaagtgccttcaccaatttgttcgagcttctcaaa  3224600                               --------->HSFB2a(1)                ====================HOX2a_HOX2a               =============================HOX2a_HOX2a               =====================HOX2a_HOX2a               <------ZmHOX2a(2)              <---------ARR14(3)              --------->ARR14(3)              --------->ARR11(3)     --------->ANAC46          --------->HSFC1(2)  <---------WRKY38(1)        <------ZmHOX2a(1) --------->MYB46(3)   --------->ARR14(2)                                                      <------ <---------ATHB12 <---------LBD16                                                         <---------ALFIN1 -------->ANAC58------>ZmHOX2a(2)              --------->At4g35610                     --------->PCF2 -------->ANAC58============================HOX2a_HOX2a                               --------->GLK1(1) ------->WOX13(1) --------->LBD16              <---------At4g35610                --------->LBD16 ---->ANAC58  --------->ARR14(2)     ------>ZmHOX2a(1)                           --------->LBD16 ---->ANAC46  <---------ARR14(2) --------->ARR14(2)         <---------bZIP60(1)  <---------LBD16 ---->ANAC58  <---------ARR11(3) <---------ARR14(2)         --------->bZIP60(1)  <---------HSFB2a(2) --->DOF2------>NtERF2<---------ARR14(2)       --------->ZAT2                    --------->HSFB2a(2) >HSFB2a(2)  <---------GLK1(1) <---------HSFC1(2)        <---------ATHB12       <---------ANAC46 -HSFB2a(2)  --------->GLK1(1) <---------HSFB2a(1)------>NtERF2                 <---------LBD16 <----   gcaatcaacgctgcgagatccccagattggaggaggttcctcgagatttagctgcccgaatgatgccatcgccatcttcgttcccgggagtcccactgtc  3224700                                     --------->HSFB2a(2)                               <---------ZAT2                             <---------ANAC55(2)                                       <---------At4g35610                             <---------ANAC55(1)                                       --------->ZAT2                             --------->ANAC55(2)                                <---------GLK1(1)       <----------DOF2       <---------ANAC58                                 <------MYB46(1)    <---------AHL20(1)       <---------ANAC58                                 <------MYB83    --------->ARR11(3)       <---------ANAC46<----------DOF2                 <---------TOE1(2)    <---------ARR11(3)     <-----------GT1------>ZmHOX2a(2)                  <---------TOE2(2)    <-- -----HVH21        --------->YAB1<----------DOF2  <----------DOF2           <---------MYB52(1)  ----- -----ETT(2)    <---------At4g35610  <---------HSFB2a(2)          *TSS     --------->LBD16     <-----   gaacaatatcttttactccgatgatcaaattacgtctttctcgatcgctttccttttctctcagacaactctctctccgtaggtttcccagcttatttat  3224800                                                                    <---------ANAC46                                                                    ----------->GT1                                                                  <------MYB83                                                                  ----------->GT1                                                                  <------MYB46(1)                                                                 <---------AtMYB61                                                                 --------->MYB111(2)                                                                 --------->MYB55(2)                                                                 --------->MYB46(2)                                                                 --------->MYB111(1)                                                                 <---------MYB46(3)                 -                                                                <---------MYB52(1)                  <     <---------ANAC58                                           <--------P                     <-----     <---------ANAC58                                           <---------MYB55(1)             ------ -------AHL20(2)               <---------LBD16                 <-------GAMYB            <---------MYB52(1) ---->ANAC55(2)           <------------CBF                    <---------MYB46(3)      ----------->GT1 ----TOE2(3)   --------->AHL20(2)      <-----------GT1     --------->MYB52(1)    <------ZmHOX2a(2)  -   gtaattagcgtttcggtttaaatctatgaattgtccggtttgaaccggtctaaccctgaacaagcggttggtgtaaattagcgatcatccgttaaattta  3224900                                    <---------WRKY18(1)                                    <-----------GT1         ---------->DOF2           ----------->HVH21       <---------YAB1          <---------AHL20(2)     <---------ICU4            <---------YAB1                                            --------->AHL20(2)     --------->YAB1           --------->AHL20(2)                                         <---------AHL20(2)    --------->ICU4          <---------YAB1                                              --------->YAB1 -------->AHL20(2)          --------->ICU4                            <---------ICU4   <---------YAB1 ---------AHL20(2)       <---------YAB1                             --------->GLK1(2)<---------AHL20(2) ----AHL20(2)           --------->ARR11(3)                ----------->RAV1(1)       --------->AHL20(2) --->AHL20(2)           <---------ARR11(3)             --------->AtMYB61     ---------->DOF2 -------->AHL20(1)     --------->YAB1    <---------MYB52(1)     --------->YAB1      --------->ICU4   aataaaataatgaaagaaatatcaaatatcatttttattgaccggttttcaaaaataccacaacaaaaataatcttttcaaaagtatttattaaaataca  3225000                                                           ---------->DOF2                                                    --------->YAB1                                            ------->TEIL <---------YAB1                                           <---------CCA1(2)                                      ---                                     <---------ANAC58  --------->YAB1                  --------->ANAC58                                <---------YAB1 <----------DOF2                         --------->ANAC58                      --------->ATHB12   --------->ANAC55(2)      ----------->HVH21<-----------GT1---                     --------->ICU4  <---------ANAC58 <---------YAB1          ----------->GT1     ---   aactccattttttaaaaattggaattatgggattatgtttcttatgtatctttctcatcataaaagacttgacaacaaaattgtttaacatgccaatgcc  3225100          --------->ANAC58          --------->ANAC46                                           ----------->GT1          --------->ANAC58                                          --------->DAG2 --------->ZAT14                                                   ---------->DOF2                 -- <---------ZAT18                                       --------->AHL20(2)                          <- --------->ZAT18                                       <---------AHL20(2)      --------->YAB1   <---- ------>AtLEC2                                  --------->YAB1  <---------HSFB2a(2)           <------ ------>ANAC58                               --------->YAB1     --------->HSFB2a(2)     <---------YAB1 ------>ANAC58           <----------ID1--------->YAB1--------->TOE2(3)        <-------TEIL <---------WOX13(1)   aagcacactcacaagtcacaaaaaaaaaaaacaaattgcaattacaaaaatcatacattaattgttctataaagtaaacattcatacattttgattaata  3225200                                <----------ID1                                ----------->GT1                            ---------->DOF2                        ---------->DOF2                     --------->YAB1                    <---------AHL20(2)                 --------->ARR11(3)                 <---------ARR11(3)                     --------->ZAT18                             <                 --------->AHL20(2)                    --------->ANAC58                            <-    <-----------GT1 <---------YAB1                     --------->ANAC58                            -- ------->AHL20(2)--------->AHL20(1)                   --------->SPL7            <---------AHL20(2) <- --------AHL20(2)<---------AHL20(1)         <---------ZAT18                    --------->AHL20(2)  -- -----ICU4      --------->CCA1(2)           --------->ZAT18        <---------At5g28300      --------- ---TOE2(3)    --------->ARR11(3)           --------->ZAT14       <-----------GT1           <--------   tttatttttcaagcttagatatattataaagaaagagaaaaactagtggacactcgaacgccctagatttactgctcgagataaaatttgattttcgtaa  3225300  Previous    Next  AGI:  At5g10270.1    Description:  CDKC;1 (CYCLIN-DEPENDENT KINASE C;1); kinase. Identical to Cyclin-dependent kinase C-1 (CDKC-1) [Arabidopsis Thaliana] (GB:Q9LFT8); similar to CDKC,2 (CYCLIN-DEPENDENT KINASE C,2), kinase [Arabidopsis thaliana] (TAIR:AT5G64960.1); similar to 80A08_23 [Brassica rapa subsp. pekinensis] (GB:AAZ67608.1); similar to 80C09_20 [Brassica rapa subsp. pekinensis] (GB:AAZ41831.1); similar to cdc2MsC [Medicago sativa] (GB:CAA65979.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contai Range:  from: 3221608    to: 3224766    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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