Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                 --------->ARR11(3)                               <---------ARR11(3)                    --------------->AGL15                    <---------------AGL15                    ------->GAMYB                   ----------------->AG                   ----------------->AGL1                   ----------------->AGL3                         ---------->DOF2                   <-----------------AGL3                     <---------ANAC58                 <-----------GT1<------ZmHOX2a(2)             <---------ANAC46              <---------ANAC55(2)                             <---------ANAC58              --------->ANAC55(2) ---------->DOF2            <-------TEIL ------->At4g35610 --------->MYB46(3)                      --------->TOE1(2) --------At4g35610 <-----------------AGL2                  --------->TOE2(2)                    <----   tagctcaatagagcttatgtaaccacatttggagatcaaaggaaactgttcaaggcaaaaacatgcgtaaaagtccaagttagtctatccatactgagct  3219000                                                                                              -------                                                                                             <-------                                                                                             <-------                                                                                        <----------DOF2                                                                                    <---------ZAT18                                                                                   <---------ANAC58                                                                                   <---------ANAC46                                --------->ZAT14       <-----------GT1              <---------ANAC58                <---------HSFB2a(2)      --------->ANAC58                      --------------------->WRI1    <-----------ARR10       --------->ZAT6     --------->ZAT6                  <---------ANAC58 ------DOF2     --------->HSFB2a(2)      --------->ANAC58                      <---------ANAC58     -   tttgcacatcttagttgtctagaattgcaaacactagactcacaagctaacacaattttctctattgctataaacagactaccttgtgtgctttgaaggt  3219100     --------->WRKY38(1)     --------->WRKY45     --------->WRKY12                                                                              <-    --------->DOF5.7(2)                                                                            <- ---->GT1                                                                                          -- --TOE2(3)                                     --------->MYB52(1)                     <---------At4g35610 --TOE1(3)                          <---------TOE2(3)        <---------AHL20(2)       --------->At4g35610 -------->ARR11(3)    <------ZmHOX2a(2)--------->CCA1(2)     --------->AHL20(2) --------->At4g35610--   aatatcgttgacttgaatagacagatcagtagggatttgagatttgacatacctgcaatagatttaaaaaaaaaaactcattagcttaagctaaacttgt  3219200                                                                      ----------->GT1                                                                     <---------TOE2(3)                                                     --------->HSFC1(1)                                                     --------->HSFB2a(2)                                              <----------DOF2    <---------At4g35610        <--------                                         --------->HSFB2a(1)     --------->At4g35610        ---------           ------->TEIL                  <---------HSFB2a(1)  <---------MYB52(1)            <-------- --------At4g35610                     --------->MYB52(1) <---------ZAT2                    --------- --------ZAT14   --------->YAB1     --------->ANAC46 <---------HSFC1(1)    --------->MYB46(3)      <- ------->At4g35610    ---------->DOF2 <------ZmHOX2a(1)   <---------At4g35610  <---------------AGL15 ------->ZAT14  <---------YAB1     <---------LBD16   <---------HSFB2a(2) <-----------GT1   --------->YAB1   ctgcagtaccatgtatatatcataaaaagtttgaataccaggaacggtctttcttctcgaagctgttagctaatgtaacaactctacttggaaatataat  3219300                                                 --------->ZAT2       --------->ANAC55(2)                       <---------At4g35610       <---------ANAC55(2)                       ----------->RAV1(2)     <-----------GT1                             --------->At4g35610         ------>ZmHOX2a(2) -AHL20(1)            --------->At4g35610     <---------At4g35610           --------->At4g35610 >AHL20(1)            --------->GLK1(1)   --------->ARR14(2)               --------->ARR11(3) -AHL20(2)          <---------GLK1(2)     <---------ARR14(2)               <---------ARR11(3)     <-- >AHL20(2)        --------->ANAC58       <----------DOF2                 <---------YAB1     --------- ---------DOF2    --------->ANAC58<----------DOF2<---------ZAT2      <---------DAG2   ---------->DOF2   gcttttgttacatactggaccagcatctccaaaactctttagcctttctgcagctgatactgaattcattcccttatgatctgcaaaacaaagaaaacgg  3219400                                                                          <------------CBF                                                                  <---------AHL20(1)                                                                  --------->AHL20(1)                                                                 <---------AHL20(2)                                                               <-----------TBP                                                             <-----------TBP                                                           <---------ANAC58                                                           <---------ANAC46                   <---------ZAT6                          <---------ANAC58                         -                   ----------->GT1                    <---------MYB46(3)<---------TOE2(3)          <-       --------->ZAT6          <-----------HVH21      <---------REM1(1) <---------YAB1   <---------PCF2 -----GAMYB  --------->HSFB2a(2)                      <-----------RAV1(1)<<<<<<<<<RAP2.2 <----------ID1 >MYB52(1)   <---------HSFB2a(2)                   --------->ALFIN1<---------AHL20(2) --------->ALFIN1   ggttatctaaaactactagaagtgtaaactatgtgtcagatagatcgatgaaggtgttgttgcttatatatatttagattggataagagtggggacaaaa  3219500                                                                      --------------->AGL15                                                                      ===============================                                                             <------MYB83                        <-----------RAV1(1)                  <------MYB46(1)                      <---------ANAC46                      <---------AtMYB61         ----------->GT1--------->ALFIN1                    <---------MYB46(3)       <---------DOF5.7(2)                                 <---------MYB52(1)                      <- -------->YAB1    --------->ARR11(3)                       <---------------------WRI1         <------ --------YAB1 ---------->DOF2                              <---------MYB55(1)                --------   tatgatagtaaacgtgaaaagatagtgtgtggctcttatatggtatacatagagagaagcagttggtgttttctaggtagagaatgttttagtcattaaa  3219600                         <---------ARR14(2)                         <---------ARR11(1)                         <---------ARR11(3)                         --------->ARR14(2)                                         <---------TOE1(2)                         <-----------ARR10                             <---------ARR14(2)                        <---------CCA1(2)                              --------->ARR14(2)                      --------->AtMYB61                           ----------->RAV1(1)  <---------GLK1(2) ===================================================================================MADS_MADS   <---- --------YAB1       ------>NtERF2                                --------->ANAC46--------->ATHB12 ---AHL20(2)  <------------CBF                  <---------At4g35610 ================================= ->AHL20(2)<-----------HVH21                    --------->At4g35610 --------------->AGL15   ---------   tatgatatgtctgtgtcattgccaccatatctactctggtctcagtagtctgcttactctcgagtctccaccatatatgtgaatcgttggattcttcaat  3219700                ----------->GT1       --------->GLK1(1)                              <---------------AGL15                      ----       <---------GLK1(1)                              <----------DOF2         --------------->AGL15      --------->ARR11(3)                              --------------->AGL15   <---------------AGL15      <---------ARR11(3)                              ========================================MADS_MADS   <---------TOE2(3)                        --------->MYB52(2)               ----------------->AGL3  ---------->DOF2                          <-------TEIL              ------------>CBF--------->ANAC46 -----ATHB12    --------->YAB1            <---------MYB52(1)    ---------->DOF2      --------->ANAC58 =====================================================================MADS_MADS      --------->ANAC58 --->CBF  --------->ZAT6               --------------->AtSPL3<---------ZAT6  <-----------------AGL3   cgtttaaagatatcactatcgtaatttgtgaagaaactttagacgttcgttttcttctttttagagtaaaggtcaatttgctaaattaagcaactaattt  3219800                                                                      ------------>CBF                                                                    <---------ARR14(2)                                                                   <-------GAMYB                                                                   --------->At5g28300                                                                  <---------MYB46(3)                                                                  <---------DEAR3(2)                                                                  ----------->GT1                                                                 <---------RAP2.6(2)                                                                 <---------ANAC46                                                                 <---------DEAR3(1)                                                                <------NtERF2                                                               <------MYB83                                                               ------------>AtMYB77                                                               <------MYB46(1)                                                           --------->MYB55(2)                                                        <---------ANAC58               ---------->DOF2                                              ----------->GT1<--------P                ==============                                             <---------TOE2(3)<---------DEAR3(1)     ----------->TBP   <---------ATHB12                       <--------P    <---------ANAC58        --------->ANAC58   ------------>CBF   <-----------GT1     <---------WOX13(1)<-------GAMYB       --------->ANAC58 --------->WOX13(1)  <-----------GT1     <-------GAMYB  <---------ANAC46   --------->YAB1 ------->GT1     --------->ICU4         <---------MYB46(3) <---------MYB46(3)<---------REM1(1)  -----   agtaaatcaatgtaaactaatttttaacagtttttgtatttttggttgatgttaattttcgtggttggcggttacaatggtgaagccataaaaacgcgtc  3219900  Previous    Next  AGI:  At5g10250.1    Description:  phototropic-responsive protein, putative. similar to phototropic-responsive NPH3 family protein [Arabidopsis thaliana] (TAIR:AT5G13600.1); similar to 80A08_21 [Brassica rapa subsp. pekinensis] (GB:AAZ67606.1); contains InterPro domain NPH3; (InterPro:IPR004249); contains InterPro domain BTB/POZ fold; (InterPro:IPR011333); contains InterPro domain BTB/POZ-like; (InterPro:IPR000210) Range:  from: 3217029    to: 3219369    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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