Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100         ------->TEIL    --------->AtLEC2              <-------TEIL -----------HVH21         --------->SPL7 ------->TGA2(1)       --------->YAB1                 --------->MYB46(3) --------TGA2(1) --------->YAB1<---------DEAR3(2)  <----------ID1               --------->ANAC46 ------->bZIP60(1)   --------->GLK1(2)        --------->ATHB12                  --------->ANAC58 --------bZIP60(1)  <---------GLK1(2)        <---------YAB1                     --------->ANAC58   gatgtcatgcacttccctctcagaatcgtaagccggttcatcacatcttcattagaacaaacacactcttaagttgatgtatacgaaacaaaaatcgaaa  3183500                                                                      <---------At4g35610                                                                      --------->At4g35610                                                                      --------->GLK1(1)                                                                      <---------GLK1(1)                                                                     <---------ARR11(3)                                                                     --------->ARR11(3)                                                               <---------ARR14(2)         <------MYB83                                                               --------->ARR14(2)         <------MYB46(1)                                                               <---------ZAT14       <---------MYB46(3)                         <---------ZAT14                    <---------ANAC58        <---------MYB52(1)                         --------->ZAT14                    <---------ANAC58       <-------GAMYB <---                       --------->ANAC46                     <---------ANAC46      <-----------RAV1(1)               <------ZmHOX2a(2)   --------->ANAC58  --------->AHL20(2)       <----------DOF2 <------   --------->YAB1    --------->ZAT6--------->ANAC58  <---------AHL20(2)------>ZmHOX2a(2) --------->MYB59   gtttagcataaattgagatcaaaacactaaacagagcaagacccatggactatatataaatagcgtatagtgatctccctctttctgttgttcggtcttt  3183600                          --------->LBD16                  ----------->GT1                  <------MYB83                                         <---------ANAC58                  <---------MYB46(3)                                   <---------ANAC58       <---------LBD16    ----------->GT1                     --------->ALFIN1 --------GT1      <------MYB46(1)                  <------ZmHOX2a(1)   <---------ANAC46             < ----DOF2--------->LBD16<---------LBD16        --------->ALFIN1 <------NtERF2    ----------->GT1 <---   tacctcttaaccggagaggctggttaaccggagaaatgacttcgatgaagtgaggatgttcaaggtggccatttcttgtgagatagtaaacaacttggac  3183700                                                                    --------->ARR11(3)                                                                    <---------ARR11(3)                                                        --------->YAB1        ------>ZmHOX2a(2)                                                       <---------YAB1       <---------ARR11(3)                        <---------WRKY18(1)            --------->ICU4 <---------DAG2        <--------                     <---------ANAC58          <---------ICU4   ---------->DOF2 ------>ZmHOX2a(1) ---------LBD16      <---------ANAC58  <---------ARR11(3) --------->ICU4    --------->ARR11(3)------- ------HSFB2a(1)<----------DOF2        --------->ARR11(3) <---------YAB1  <---------YAB1 <----------DOF2   tcttcggaaaatgggtttctttgtcttgacctcttcttcaagttcttcatcatgttgatgatgattcaaagaccttatgatcctctctggacttttgttg  3183800                        --------->At4g35610                          <---------AHL20(2)                 <---------At4g35610                                 --------->AHL20(2)       <------     ------>NtERF2      <---------At4g35610         --------->LBD16  --------->ATHB51       --------- ---RAV1(1)     ------->TEIL                 --------->YAB1 --------->CCA1(2)               <-------- --->ID1   --------->At4g35610   <----------DOF2  <---------LBD16 *TSS                    <----------DOF2   ttctctctgcctcttctgcatcttacagcttccatcttttgtgtctataatgtccggacaagagatgagaattatttaacacagactgtggtctttatat  3183900        --------->DAG2      --------->CCA1(2) ---------->DOF2 -----TBP                                                           <---------ARR14(2)          <---- >AHL20(2)       ------->TEIL                           <-----------HVH21        --------->CCA1(2) -- ---TBP--------->MYB52(1)                  <------------CBF     --------->At4g35610             -----   atagaaagataagggaatgtatttatctctgtgtgtgtgtgtgtgaattggctctctctgtgagatagcagaattggcattagagatgagccaaaccaga  3184000             <---------ANAC58                                             <---------At4g35610             <---------ANAC58                                --------->YAB1            --------->YAB1            <------------------------ANAC81             --------->ZAT14   --------->At4g35610  <----- -----ARR14(2)             <-----------GT1            <-----------HVH21   --------->ZAT2      <------ --------->HVH21   <----------DOF2   <<<<<<<<<<<<<<<<<LFY    --------->TOE2(3)     <---------AHL20(2) ---->ARR14(2)<----------DOF2----------->RAV1(2)     <---------DEAR3(2)   <---------ZAT2      -------   actgacaacgacttggctttactttctttctacctgatggtacaatgggataagccggtccagtcttaatctatccagctctgattttatcttgatttta  3184100                                                                         <------MYB83                                                                         <------MYB46(1)                                                                        --------->MYB59                                     <----------DOF2                  <---------ARR14(2)                     <---------DAG2  --------------->AGL15            <---------MYB52(1)           <---------LBD16          <-----------------AGL3            --------->ARR14(2)            -         --------->ARR14(2)         <-----------------AGL2        <---------LBD16                 <--         <---------ARR14(2)     <---------ANAC58               <<<<<<<ZML2 --------->WRKY18(1)    <--      --------->AHL20(2)        <---------ANAC58            ------>ZmHOX2a(1)                   <----      <---------AHL20(2)       <---------MYB46(3)           <---------HSFC1(1)<---------YAB1   <----- ----AHL20(2)        --------->TOE1(3)                      --------->HSFB2a(2)  <---------WOX13(1) - ---AHL20(2)         --------->TOE2(3)                      <---------HSFB2a(2)--------->ATHB12------ -->AHL20(2) --------->LBD16<----------DOF2                 --------->HSFC1(1)--------->ICU4   <-----   atttggatttaaatccggttcaaccttattctttgggtgctttatatgggctaaaaccgttcctagaacccggttcggtcatgatagatttagaccagat  3184200                                                            <----------DOF2                                                      --------->ARR11(3)                                                      <---------ARR11(3) -------->PCF2                                       --------->YAB1 ----MYB83<----------DOF2                          <---------TOE2(3) ----MYB46(1)                                     --------->YAB1            --------->AHL20(2)<------ -----WOX13(1)                             <---------bZIP60(1)   <---------WOX13(1)    --------->YAB1 ----ARR14(2)                <------ZmHOX2a(1)  --------->ICU4  >>>>>>>>>ARR2   <---------AHL20(2) -------->PCF5             <---------TOE2(3)    <---------YAB1 --------->ATHB12 --------->AHL20(2) --->ARR14(2)     <---------ARR11(3)       --------->bZIP60(1)<---------YAB1<---------AHL20(2)------- ----GLK1(2)      --------->ARR11(3)   <-----------HVH21 --------->GLK1(2)--------->YAB1     --------   tggtccctcatgctttagaagatttagttgaggaattgatgtgtcatgtcattaatgatattctttgattgtcgaatattaattaataaacatcatttaa  3184300                   ----------->GT1               >>>>>>>>>>AGL22               >>>>>>>>>>AGL24                                                  <---------------AGL15               >>>>>>>>>>AGL20                                                  --------------->AGL15           <-----------------AGL3                                              <-----------------AGL3      <---------MYB52(1)                                                --------->ATHB12    <---------ANAC58                    <---------TOE2(3)              <------ZmHOX2a(2)    <---------ANAC58           --------->CCA1(2)                       <---------YAB1    <---------ANAC46      ---------->DOF2                             --------->ARR11(3) ---AHL20(2)<---------------AGL15      ---------->DOF2                <---------ARR11(3) -->AHL20(2)--------------->AGL15   --------->At4g35610             --------->ICU4                <-- ->AHL20(2)=====================================================================================MADS_MADS   tttgtttcgtttgcctaaatatggataaaaaagatagaagctaaagttgtttcagagaagacgatgagtcaagatcattgtgcttcatatggaagtttga  3184400  Previous    Next  AGI:  At5g10150.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G59790.1); similar to 4D11_16 [Brassica rapa subsp. pekinensis] (GB:AAZ67530.1); contains InterPro domain Protein of unknown function DUF966 (InterPro:IPR010369) Range:  from: 3181984    to: 3183866    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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