Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                    --------->WOX13(1)                                                                          <-----------HVH21                                                                      <---------GLK1(2)                                                                      <---------ARR14(2)                                                                      --------->ARR11(1)                          --------->ANAC58                            --------->ARR14(2)                          --------->AtLEC2                           <---------HSFC1(2)                  <---------GLK1(2)--------->ANAC58                  --------->HSFC1(2)                  <---------ARR14(2)                                 --------->HSFB2a(1)                  --------->ARR14(2)                          --------------------->WRI1       <-----             -------->P   --------->ANAC58                    <----------DOF2   <---------ATHB12            <-----------GT1        --------->ANAC58      <----------DOF2<-------TEIL         <-------       ------->GAMYB<-------TEIL<---------ATHB12 --------->GLK1(1)   <---------HSFB2a(1)--------->MYB52(1)    --------->MYB52(1)   --------->WOX13(1)      <---------GLK1(1)  ----------->ARR10--------->YAB1   catgagcaacggtcttaccagattcatcaagcaaatcacccaaaatcgatgaaatccctcttttctttggaagattcgtcaaatcactcaaaacgggtcg  3167900                                                             --------->ARR11(3)                                                     ---------->DOF2                                                  ----------->RAV1(1)                                                  ------>MYB83<------ZmHOX2a(2)                                                  ------>MYB46(1)                                                <---------MYB55(2)      ----------->HVH21                         --------->MYB46(3)      <---------ETT(1)                         --------->ANAC46 --------->MYB52(2)                            --------->ANAC58 <---------MYB46(3)                            --------->ANAC58      <----------DOF2 ----ANAC46          <---------At4g35610     <-----------GT1 <---------ARR11(3)    ----------->RAV1(1) ----HVH21   --------->ATHB12      --------->At4g35610   ---------->DOF2        --------->ANAC46   ggtttgttccgacactgatttgctgctatcttcagtcatcttcaaaatcacccaacaaagaaagatcaatactttcaatttcaaacaacaaaactaagtc  3168000                                  --------->DOF5.7(2)                                 <----------DOF2                                 --------->TOE1(3)                     ---------->DOF2   ------->GAMYB             --------->TOE2(3)                --------->ATHB12 --------->TOE2(3)               --------->TOE1(3)            <------   aaattcgatactaagaactcattgaaagtcggaaactttaaccccagattagaaattcaacaaaaacccttaatccaaaactcaatttcgaatcgattcg  3168100                                                                                               ------                                                                                              <------NtERF2                                                                                             <-------                                                                                            ---------                                                                                            <--------                                                                                          <------MYB83                                                                                          <------MYB46(1)                                                                                         <---------AtMYB61                                                                <-------GAMYB            <---------MYB46(3)                                                               <---------DEAR3(2)       <---------WOX13(1)                                                               <---------MYB46(3)     --------->ATHB12                                                              <---------DREB2C(2)  <------ZmHOX2a(2)                                                              <---------At1g77200 --------->ARR14(2)                                                              <---------DEAR3(1)  <---------ARR14(2)                                                            <-----------HVH21     <---------AGP1                                                          <-------TEIL--------->ICU4 <---------YAB1                                                        <---------ARR14(2)        --------->ARR11(3)                                                        <---------GLK1(2)         --------->GLK1(2)                                                        --------->ARR14(2)        <-----------ARR10                                   ----------->HVH21   <------ZmHOX2a(1)         <------ZmHOX2a(1)                              <---------WOX13(1)       ====================================HOX2a_HOX2a     <------ZmHOX2a(1)       <---------ANAC58     --------->ATHB12    <---------YAB1------>ZmHOX2a(2) ---------->DOF2   ----------->GT1<---------WOX13(1)   ===================================HOX2a_HOX2a -TEIL  ----------->GT1      <---------ANAC58   <---------WOX13(1) ----------->GT1<---------ARR11(3)   tacaaaaggatagaaaaaaactagaaaatttgagtgactgacctagagagattgataggattcgtcggtgggataattgtggaggatctgattggtgggg  3168200                                                                                                    -                                                                                                  *TSS                                                                                               <-----                                                                                               ------                                                                                               <-----                                       --------->HSFC1(2)                                      ------                                       <---------HSFC1(2)                                     -------                                    --------->LBD16       --------------->AGL15               <------                                  --------->SPL7         <-----------------AGL1              <-------                                  <---------LBD16        <-----------------AGL2            --------->YAB1                                 --------->ALFIN1        <-----------------AGL3            --------->ATHB51                          <------NtERF2<---------HSFB2a(1)<----------DOF2                  -------->ATHB1                         --------->LBD16 <---------ARR14(2)                                <--------HAHB4                 <-------GAMYB <---------ANAC58        <-----------GT1                     <---------ICU4   <---------TOE1(3)    <---------ANAC46 --------->ARR14(2)                                --------->AHL20(2)   <---------TOE2(3)   <---------LBD16 --------->HSFB2a(1)<---------------AGL15           --------->ICU4 ----->GT1      <------MYB46(1)<---------ANAC58 ------>ZmHOX2a(2)                         <---------ATHB51 --MYB46(3)     <------MYB83<---------ARR14(2) <------ZmHOX2a(2)                          <---------YAB1 >ALFIN1       <---------AtMYB61<---------SPL7<---------ARR14(2)                       <---------YAB1 -ANAC46   --------->ATHB12 --------->ARR14(2)--------->ARR14(2)                     --------->YAB1--   aaattagggtttttgatttggttgaggcgggaaccgtgcggagtttccgatctcgattttctttttttggactcgcgtttttcgaaatcacaattattaa  3168300                                     --------->TCP16(1)                                     <---------TCP20                                     --------->PCF2                                     <---------PCF2                                     --------->PCF5                                     <---------TCP15(1)                                    <---------TCP16(2)                     ------------>CBF --------->DOF2            <---------ARR11(3)                         ---------->DOF2 ----AHL20(2)              --------->ARR11(3)                      --------->YAB1 --->AHL20(2)             --------->GLK1(1)                      <---------YAB1 ----AHL20(1)             <---------RVE1(1)                     --------->TOE2(3) --->AHL20(1)             <---------GLK1(1)                    --------->YAB1 -->AHL20(2)              --------->RVE1(1)                    --------->ATHB12            --------->AHL20(2) ---AHL20(2)             <---------ARR11(3)                    <---------ICU4              <---------AHL20(2) --YAB1 ---------->DOF2  --------->ARR11(3)                   <---------ATHB12            --------->AHL20(2) ------->AHL20(2)  <---------ZAT14 <---------MYB46(3)         --------->ICU4   <---------ATHB12   attaaagcattaaagtgagactggagagatatctcagtggtcccactacttactgagataaaaaatcattaataaagcccaatagttttgaaattaataa  3168400                                                                                               ------                                                                                               ------                                ------->TEIL                                                   <-----                             --------->ANAC46                                                 <------                             <---------ANAC55(2)                                              -------                             --------->ANAC55(2)                                              -------                             --------->ANAC55(1)                                            ---------                            <-------TEIL                                                  <---------MYB52(2)                          --------->TOE2(2)               --------->TOE2(3)              --------->ANAC58                        <-------TEIL                      <---------MYB59                --------->ANAC46                  <---------ANAC58         <------ZmHOX2a(2)                    --------->LBD16<-----   --------->YAB1 <---------ANAC58--------->YAB1      ----------->HVH21     ------->TEIL --------->ANAC58   gcccattataaacttactgggcttgatacatacgtatcagaagggatcatatgggcctgaccttattttgaagttttgaacccgagtttccaagtaaccg  3168500 --->DREB2C(2)                                               --------->At5g28300 ->GAMYB                                                  <---------At5g28300 ----ETT(1)                                              <-----------GT1 ------AtMYB77                                    <---------AHL20(2)          --------->MYB52(2) -->DEAR3(2)                                 <---------YAB1 ----------->GT1 <---------MYB52(1) -->MYB46(3)                                <---------AHL20(2)    <---------AHL20(2) >MYB52(1)               --------->ANAC55(2)<---------AHL20(1)    --------->AHL20(2) -----ID1    <---------YAB1    <---------AHL20(2)<---------AHL20(2)<-----------GT1   acaaatcccaaaattatgtttttgtttacatatttattccatgtattattttttattttttactgtaattaactatttgttagttttcattttgaaacga  3168600                                                                                        --------->TOE2(3)                                                                                       --------->ANAC58                                                                                       <---------ANAC55(1)                                                                                       <---------ANAC46                                                                             --------->ANAC58                                                                        <---------TOE1(2)                                                             <-------TEIL  <--------P  <---------ANAC55(2)                                                           --------->TOE1(2) --------->ANAC58      --                                                         --------------->AtSPL3        --------->ANAC55(2)          <---------AHL20(2)                       --------->ANAC58     <---------TOE2(2)          --         <---------AHL20(2)         --------->ARR11(3)   <---------------AtSPL8   <---------At4g35610         --------->AHL20(2)     ---------->DOF2    --------->ANAC58     <---------TOE2(3)          --     <---------YAB1  --------->LBD16<---------ARR11(3)   --------------->AtSPL8   --------->At4g35610   ----------->GT1   --------------->AGL15     ----------->GT1          --------->MYB59--------->ANAC58   ataagttgtaattaaatccattccccaaaatataaaaagacatttaagatggtaagaaaaacgtacaagtttcttaggtaagtaagcttacgtaaactcg  3168700                                 --------->GLK1(1)                                 <---------GLK1(1)                              --------->LBD16        <---------ICU4       --------->LBD16                                                       <-     --------->AHL20(2)     <---------LBD16                                                        --     --------->YAB1     <---------ICU4                                                      --------- --------->GT1          --------->YAB1                                                      --------- ------->YAB1          <---------ATHB12                       <----------DOF2               --------- ---->ZmHOX2a(2) --------->GLK1(1)               <------ZmHOX2a(2)    <-------TEIL <---------CCA1(2)   atcgtaataatatttgctgatatcaataatccctgaattccctcgcttacgatcaaattcaatgctttcagtttcatcttatgccatctctcgctcgtaa  3168800  Previous    Next  AGI:  At5g10110.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G65120.1); similar to 52O08_25 [Brassica rapa subsp. pekinensis] (GB:AAZ67571.1) Range:  from: 3166440    to: 3168298    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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