Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                    <--                                                                                                  <--                                                                                            <--------                                                                                         <-----------GT1                                                                                        <-----------GT1                      <----------DOF2                                                  --------->KAN4(2)              <-----------RAV1(2)                         <---------ANAC58            --------->ATHB51     <---------MYB55(2)                                   <---------ANAC58            <---------ICU4     --------->MYB46(3)              <---------WOX13(1)   <---------ANAC46           <---------YAB1--    --------->ANAC46--------->At4g35610    --------->ANAC58                          --------->ICU4<-  <---------ALFIN1  <---------At4g35610    --------->ANAC58                   ---------->DOF2<-------   attcccacccgatggtccaggctgcttcaagttcccaagattgccaaacaacatcacattgcttgaagaagctcgaaccatagagccattattccctttt  3155300                                                                ------>MYB83                                                                ------>MYB46(1)                                                             <---------HSFC1(2)                                                             --------->HSFB2a(1)                                                             <---------HSFB2a(1)                                                             --------->HSFC1(2)                     -   <---------YAB1                                          --------->ARR14(2) <-----------RAV1(1)   < -------ANAC58                                             <---------ARR14(2) <---------MYB46(3)   <- -------ANAC58 --------->ARR11(3)<---------At4g35610    --------->ANAC46<---------MYB46(3)         -- -DAG2<---------YAB1             ----------->RAV1(2)   --------->LBD16 <----------DOF2           <--- ------------------->WRI1   --------->At4g35610  <---------ANAC58     <---------ANAC58          ----- ---------DOF2 <---------ARR11(3)--------->At4g35610   <---------LBD16<---------ANAC58          <---- ---DOF2      --------->YAB1<---------At4g35610  <---------ANAC58  ------>ZmHOX2a(1)        ------>ZmHOX2a(1)   gctttctgattatcgatgatcatgctctctagctcacctgataaaccaattgcttccctcggaaccttcctcgcttgttgttgttggactggtccttgat  3155400            --------->MYB52(2)            ----------->GT1            <---------MYB46(3)         <-------GAMYB        <---------MYB46(3)        --------->ATHB12     <---------ANAC58     <---------ANAC58   <-----------GT1                                                                             <-----  <---------YAB1                         <---------YAB1                                        ------ -------->YAB1                        <---------WOX13(1)                                    --------- ---------ICU4                      --------->ATHB12                                        <-------- --------YAB1   --------->KAN4(2)>>>>>>>>>MYB1                                         ----------->RAV1(2) ------->ICU4<-------GAMYB       >>>>>>>>>MYB2                                        ------->TEIL ------ICU4 <------MYB83        --------->MYB52(1)                               <----------DOF2 ---->ICU4  <------MYB46(1)   <---------MYB59                                 <---------ARR11(3) -----YAB1<--------P          <---------MYB46(2)            <----------CDC5   --------->ARR11(3)  ---   tattattacttggttggttattcccattactgcctaactgattgttatttgggtattgatgcgatgagggttttgaaacaggtctttgtacctggttctg  3155500                                                                                                 <---                                                                          --------->At4g35610   <----                                                                          <---------At4g35610  <-----        --------->At4g35610                                             --------->ZAT14       <------      ------>ZmHOX2a(2)                     ----------->GT1             --------->ZAT18      --------    <---------ARR14(2)                   ------>ZmHOX2a(1)              <---------ZAT14     <--------P    --------->ARR14(2)             --------->HSFC1(2)             --------->CCA1(2)       <---------MYB46(3) ----HSFB2a(2)                     <---------At4g35610           --------->ARR14(2)       --------->MYB55(2) --->HSFB2a(2)             <---------AHL20(2)                    <---------ARR14(2)      --------->ALFIN1 >ARR14(2)           <----------DOF2     <---------LBD16       ----------->ARR10         <---------AtMYB61 -ARR14(2)   ----------->GT1       --------->HSFB2a(1)   <-------TEIL<------MYB46(1) <---------At4g35610 ---->TEIL <-----------RAV1(2)     <---------HSFC1(2)--------->MYB59 <------MYB83    --------->At4g35610   gacctcgatcggctcaggtaaaactttattttcttgaagcttcctcgggttaaattcggtacatggagatttggtgaactgaatgttagcggtggtagcg  3155600                                                                                   <-------GAMYB         <------NtERF2                                                            <---------MYB46(3)     <---------MYB46(3)                                                       =============MYC_MYB    <---------AtMYB61                                         <---------ANAC58--------->TGA1a    --------->ALFIN1                                          <---------ANAC58<---------TGA1a  <---------ANAC46                                    ----------->HVH21       --------->bZIP60(2) <---------ANAC58                                    --------->LBD16          ======================= <---------ANAC46                                   --------->ANAC46          ======================= <---------DEAR3(1)                                <------NtERF2              --------->O2 <---------ANAC58                                  --------->LBD16            <---------O2 ----GAMYB                                         <---------LBD16            --------->ANAC58 -----MYB46(3)                                     --------->At4g35610   --------->ANAC46 ----ANAC46                    <----------DOF2   <---------LBD16         --------->ANAC58 ---At4g35610          <---------ICU4          <-----------HVH21         --------->ANAC58 ---->AtMYB77    <---------At4g35610      <---------YAB1      <---------ANAC46--------->ANAC58   gttgcggtggaggcattgctgctactcattgtgcttttatggctaccattgtccgcgggacatttcttggaccacaagccacgtctgttaaacacaaacc  3155700                                                                                   --------->WOX13(1)                                                                                 ------------>CBF                                                                             --------->ANAC46                                                                           ----------->RAV1(1)                                                                           <---------ALFIN1                                                                         <-----------HVH21                                                                         ------>NtERF2                                                                        --------->ANAC58                                                                        --------->ANAC46                 <----------DOF2                                        --------->ANAC58           --------->ANAC46        --------->At4g35610                  --------->DEAR3(1)          <    --------->DEAR3(2)   <---------ALFIN1                              <---------LBD16             -- ---------->DOF2 <---------DAG2<---------GLK1(2)      --------->HSFB2a(2)--------->LBD16           -- ===========bZIP_DOF    <---------ZAT14         <---------ALFIN1   <---------ARR14(2)<---------ATHB12 ===========bZIP_DOF   >>>>>>>>>>>>>>>>>LFY  ------>ZmHOX2a(1)     --------->ARR14(2)------------>CBF   ccaaaaaccgacaacgcgactttttctccactggattatctgccatccttccacctctagatagaaccgaaaccccgccacagaacaatcaatggaaccc  3155800            <---------ZAT18            --------->ZAT18            <---------ZAT14            --------->ZAT14        --------->ALFIN1                                               ----------->RAV1(1)        <--------P            --------->MYB52(1)                    <------ZmHOX2a(1)           ----- ---------->DOF2      ----------->GT1                       <---------HSFB2a(2)                <----- XXXXXXXXXXXXXXXXXXXXMIR408   <-----------GT1     <---------ANAC46 <----------ID1        --------->CCA1(2) ------->ANAC58      --------->CCA1(2)     <----------DOF2  --------->HSFB2a(2)      <------ZmHOX2a(1) ------->ANAC58 <------ZmHOX2a(1)  --------->MYB52(1)     <-----------GT1 <------------CBF     ------   caagaaaggggtagtgcaggaagatagaaatataacgaaacagagcttaatggtttgtatttacagaagaggacaacattgttaagaggagataagagat  3155900                    <---------ARR14(2)                 <---------ANAC58                 <---------ANAC46            <-----------RAV1(1)         <----------DOF2    <---------HSFB2a(1)    --------->HSFB2a(1)    <---------HSFC1(2)                                                                            ---    <---------At4g35610                                                                      <-------    --------->HSFC1(2)  ------>ZmHOX2a(1)                                                  ---------- <------ZmHOX2a(1)  --------->ARR14(2)                       <---------YAB1          ----------->GT1 ---->CCA1(2)    <---------ANAC58                          <---------ICU4            --------->AtLEC2 ----ARR11(3)<---------At4g35610              --------->AtLEC2--------->YAB1      <---------ARR14(2) --->ARR11(3)--------->At4g35610  ------------>CBF        --------->ICU4          --------->ARR14(2)   ataggaagcttcttttgctgcgtttcctcttcttgaatcaatagttccatacaaaatggcattatgatcaaactaggttaagaagaaatgcaaaaaagga  3156000                                <----------ID1                           --------->YAB1                        --------->YAB1                       <---------AHL20(2)                       <---------ATHB51                    <---------AHL20(2)             <-----------GT1                   <---------AHL20(2)         <---------AHL20(2)          <----------ID1<---------ICU4       <---------AHL20(1) ------>MYB46(3)   --------->AHL20(2)        --------->AHL20(2) --------AtSPL8--------->ICU4---------->DOF2 <---------AHL20(2)                        <----------DOF2 >DOF2    ----------->GT1 <---------YAB1------------>CBF                  <---------GLK1(2)    <-----   acaactaaaaataggtcaaaattaaataatgaaaagaacaagaacaattaatttttctcttctcaaatcgatatcaaattctcaatagactttggtgatg  3156100                                                                      <---------ANAC58                                        <----------DOF2               <---------ANAC58                                    <---------GLK1(1)            <---------MYB46(3)                                    --------->GLK1(1)         <-----------RAV1(1)                  <-                                   --------->ARR11(3)   <----------DOF2   ---------->ID1           <-                                   <---------ARR11(3)  <------------------------ANAC81             <- ----ANAC46             <-----------HVH21      <---------ALFIN1<-------GAMYB    <----------DOF2    <-   ggtttgtcttctgttctgttctgttctgtcaattcaagatttcttttcccctctctctctttttctgttgttgtttgtctctcttttttcttatggctat  3156200  Previous    Next  AGI:  At5g10090.1    Description:  tetratricopeptide repeat (TPR)-containing protein. similar to tetratricopeptide repeat (TPR)-containing protein [Arabidopsis thaliana] (TAIR:AT5G65160.1); similar to 52O08_23 [Brassica rapa subsp. pekinensis] (GB:AAZ67569.1); similar to 4D11_10 [Brassica rapa subsp. pekinensis] (GB:AAZ67524.1); similar to 80A08_7 [Brassica rapa subsp. pekinensis] (GB:AAZ67592.1); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990); contains InterPro domain Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609); contains InterPro domain Tetratricopeptide TPR-1 (InterPro:IPR001440); contains InterPro domain Tetratric Range:  from: 3153723    to: 3155746    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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