Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                 --------->SPL7           ------>NtERF2              ----------->HVH21        <---------ETT(1)             --------->LBD16------>NtERF2            <---------ANAC55(2)        --------->ANAC46            --------->ANAC55(2)       <---------HSFB2a(2)            --------->ANAC46--------->LBD16           <---------HSFB2a(2)        --------->HSFB2a(2)           --------->HSFB2a(2)     <-----------GT1                                        <------MYB46(1)       <---------ANAC58    <---------LBD16                                                <------MYB83     <---------YAB1       <---------LBD16          <---------TOE2(3)                     <---------TOE2(3) --DOF2<---------ANAC58 <-----------GT1--------->LBD16          ------>ZmHOX2a(2)        --------->MYB59   atcgattatgcttcccgtaacccatttttccggcgattttcccgacaaatgcaaaggtttttttgatcggcttagggttttatatgtaaattaggttttc  3150400                                                     ------->MYC4                                                     ------->MYC3                                   -                                                     <-------MYC4                                ----                                                     <-------MYC2                               <----                                                     <-------MYC3                       --------->ANAC46                                                     ------->MYC2                       <---------ANAC46                                                     -------->ABF1                      <---------ANAC58                  ----------->GT1                   =============================bZIP_DOF      ------          --------->ANAC58                          --------->O2                        <---------ANAC55(1)          --------->ANAC46                          <---------ANAC55(2)                 <---------ANAC55(2)          --------->ANAC58                          <---------O2                        --------->ANAC55(2)         <------NtERF2                              --------->TGA1a                     <---------ANAC58        --------->MYB52(1)                          --------->ANAC55(2)                 ----------->GT1        ------>NtERF2  <-----------GT1              --------->ANAC46                    --------->ANAC58       ----------->HVH21           *TSS------------>CBF<-----------HVH21         --------->At5g28300<       --------->DEAR3(1)   ------>MYB46(1)         <---------TGA1a             ----------->GT1<-----      --------->DEAR3(2)    ------>MYB83         <---------ZAT18      <----------DOF2   --------->ANAC58      --------->ATERF1(1)   --------->MYB52(1)   <---------ZAT14     <---------DAG2     --------->ANAC55(1)     --------->At4g35610  --------->AtMYB61      --------->ZAT18  <---------ALFIN1    <-----------GT1     <---------At4g35610  <---------MYB59 <------------CBF      <-----------GT1--------->LBD16-------   taatggtagccgacggaacgatgttaaaccaaaccgaatcgaacaattgagtacacgtgtcatatatcacacctttcattcagggtaattacgtaatttt  3150500                                                                      <---------ZAT14                                                                      --------->ZAT18                                                                      --------->ZAT14                                                                  <---------------AtSPL8                                                             ------->MYC2                                                             <-------MYC4                                                             ------->MYC3                                                             ------->MYC4                                                             <-------MYC3                                                             <-------MYC2                                                            <---------O2                                                            <---------TGA1a                                                 --------->ATHB12---------->DOF2                 <---    --------->ATHB12                 <---------ARR14(2)     --------->TGA1a               <---------- -------->AHL20(2)               ----------------->AG       --------->O2                 --------->ANAC55(2) ----->YAB1                      ----------------->AGL1     ================bZIP_DOF     --------->bZIP60(1) -----YAB1           <---------MYB52(1)         <---------YAB1 --------->REM1(2)         <---------ANAC55(2) --->AHL20(2)       --------->At5g28300  --------->LBD16 <---------ZAT18                 --------->ANAC46 ---------AHL20(2) --------->TOE2(3) --------->ARR14(2)  --------->ZAT18                <-----------STF1 ----AHL20(2)      ----------->GT1--------->AtMYB61<---------WOX13(1) <-------TEIL     <-----------GT1 -->YAB1  <----------ID1         ----------------->AGL2  <---------ZAT14    ----------------------->TaNAC69(2)   aataaatgatttaagacaaaaccgtaattcccaaaaccaaaaccggacatatgattgagtacacgtgtaaagtacaccgcttggggtatttacgtcattt  3150600                                                                               ------>MYB83                                                                               ------>MYB46(1)                                                                            --------->MYB46(3)                                                                    --------->ZAT6                                                            --------->WOX13(1)----------->RAV1(1)           <---------ANAC58    <<<<<<<<<TBF1             <-----------HVH21------>NtERF2   --------->TOE2(3) <---------TOE1(3)                  ------->GAMYB    --------->DEAR3(1) --------GT1      <---------MYB52(1)                   --------->ZAT6    <---------ETT(1) -TGA1     <---------ANAC58 <<<<<<<<<TBF1        --------->ZAT6--------->YAB1--------->AtMYB61    ---   tacaacctcgatttcttcccgttaagcttcttcttcttctctctcactctcactctaacagtcagtcataactctccgaccaacattcacactctctcga  3150700                    <---------ARR11(3)                    --------->ARR11(3)                          <-----------GT1           <---------ZAT6               ----------->TBP                                 <---------ZAT14            -----------             --------->HSFB2a(2)   --------->GLK1(2)      <---------ANAC58              <---------ANAC46             <---------HSFB2a(2)<---------TOE2(3)         <---------ANAC46              <---------ANAC58   <---------ARR11(3)   ------>ZmHOX2a(1)                 <---------ANAC58              <---------ANAC58   --------->ARR11(3)  --------->TOE1(2)              <---------ANAC58               <------MYB46(1)  --------->RVE1(1)--------->GLK1(1)              <------------CBF                   <------MYB83  --------->CCA1(1)--------->RVE1(1)              <---------GLK1(2)         --------->At4g35610 ------>AHL20(2)   --------->CCA1(1) ------------>CBF <---------ANAC58      <---------At4g35610   tataatatctctcttctacaaatatccttcgattaagaatccaatttctctagattgtttgcttgtttactgtacattagctgtgctaggtcgtgttaat  3150800                                                         <----------DOF2                                                         <---------DAG2                   <---------At4g35610               ------>ZmHOX2a(2)            ------>ZmHOX2a(1)                       <------ZmHOX2a(2)           ==================================================================================MADS_MADS           --------------->AGL15                   <---------ARR11(3)          <---------ANAC58                         --------->ARR14(2)          <---------ANAC46    <---------ZAT2 <-----------HVH21<-----------GT1--------------->AGL15          ----------------->AGL1 ----------->GT1   --------->ARR11(3)        <---------------AGL15          <---------ANAC58    --------->ZAT2<---------bZIP60(1)          <---------ZAT18   <------------CBF--------->At4g35610      --------->bZIP60(1)          --------->ZAT14          --- >GT1   <-----------GT1       --------->STY1(2)    <---------ARR14(2) <---------ANAC46        <------ZmHOX2a(1)   ctgagaattgtttcctgtttcagcaaaaccctagctcgaaaaaatggtgtcacgatctgcttttttactcttctgtgtgctatttctagctacagaggag  3150900                                                                                     --------->MYB52(2)                                                                                     <---------MYB46(3)                                                                                    <-------TEIL                                                                                  <---------ARR14(2)                                          ------>NtERF2                           <---------GLK1(2)         ------>ZmHOX2a(1)               --------->DEAR3(1)                       --------->ARR14(2)        --------->TOE2(3)           <----------DOF2                    --------->LBD16 ------>GLK1(2)              <-------TEIL----------->HVH21       --------->ZAT6<---------TOE1(2)   actctagcttccttattctcatcaaggctgattcatcgcttctccgacgaaggaagagcgtcgattaagactccgagttcgtcggattcgttgccgaata  3151000                                     --------->GLK1(1)                              ---------->DOF2                                                     ---                      --------->MYB52(2)                                                          ---                    <---------ARR14(2)                                                     ----------                    <---------MYB52(1)    --------->LBD16                <-------TEIL    ----------->RAV1(2)                  <---------MYB46(3) <---------GLK1(1)               <---------TOE1(3)   --------->At4g35610             <---------YAB1 ----------->HVH21            ------->TEIL<---------TOE2(3)   <---------At4g35610   aacagagcttagagtattatcggttactggctgaaagtgatttccgaagacagagaatgaatcttggtgctaaggttcagtctcttgttccatctgaagg  3151100                                ----------->GT1               --------->HSFC1(1)                          --------------->AGL15               <---------HSFC1(1)                          <---------------AGL15               <---------HSFB2a(2)                        ===========================================         --------->ARR14(2)     <------MYB46(1)           ----------------->AGL3         <---------ARR11(3)     <------MYB83              ----------------->AGL2         --------->ARR11(3)    <---------------AtSPL8     <-----------------AGL3 ------>ANAC58 --------->HSFB2a(2) <-------TEIL         --------->ZAT6      --------->AHL20(2) ------>ANAC58<---------LBD16<---------AtLEC2         <-----------GT1 ----------->GT1 <----------DOF2 ->HVH21<---------CCA1(2)<----------DOF2     <----------DOF2        ---------->DOF2 ------>ZmHOX2a(1)   aagcaaaactatatcttctggaaatgactttggatggtacattgtttctttcattttcactctaaaattagaaagaaaaaaaattcctctttttttcttc  3151200                        <-------TEIL                       --------->ARR14(1)                      <---------GLK1(2)                      --------->ARR11(1)                 <----------DOF2              ------->TEIL             ---------->ID1               <---------ANAC58          --------------->AtSPL8          <---------ANAC46    <---------------AGL15                 <---------ANAC58                        <---------MYB52(1)    --------------->AGL15             --------->DAG2                             <----------DOF2   ----------------->AGL3            ---------->DOF2                       <----------DOF2 ====================MADS_MADS  --------->LBD16                 --------->At4g35610            <-----   aagtttctaaattttgtacctttagattcgattccgaagaaaagtcgtgttttgactaactcaatctgctacatagtcttttcctttgggtttacttctt  3151300  Previous    Next  AGI:  At5g10070.1    Description:  RNase L inhibitor protein-related. similar to 80A08_4 [Brassica rapa subsp. pekinensis] (GB:AAZ67589.1); contains InterPro domain Possible metal-binding region in RNase L inhibitor, RLI (InterPro:IPR007209); contains InterPro domain Protein of unknown function DUF367 (InterPro:IPR007177) Range:  from: 3148523    to: 3150435    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g10080.1    Description:  aspartyl protease family protein. Identical to Aspartic proteinase-like protein 1 precursor [Arabidopsis Thaliana] (GB:Q9LX20;GB:Q0WVG6); similar to aspartyl protease family protein [Arabidopsis thaliana] (TAIR:AT4G35880.1); similar to 80A08_5 [Brassica rapa subsp. pekinensis] (GB:AAZ67590.1); contains InterPro domain Peptidase aspartic, catalytic; (InterPro:IPR009007); contains InterPro domain Peptidase aspartic, active site; (InterPro:IPR001969); contains InterPro domain Peptidase A1; (InterPro:IPR001461) Range:  from: 3150844    to: 3153381    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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