Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                     ----------->RAV1(1)          <----------DOF2 <---------TOE2(3)                --------->ANAC58         --------->ATHB12      --------->DAG2                --------->ANAC58        <---------YAB1        ---------->DOF2         <---------ZAT14                <-------TEIL          --------->MYB52(1)      <---------ANAC46               --------->HSFC1(2)--------->AHL20(2)        <---------ALFIN1 <--   acacagttgtgagtactgaagcaacaatttgttcttcgaagtttcattggctttgaataaaacataaaggaaactatgcatacccacattgccaattgaa  3150000                                                                                                  ---                                                      <----------DOF2                             <--                                                --------->YAB1                                 <-----       <-----------RAV1(1)                --------->ANAC58                                    <------       ==========================RAV      --------->ANAC58                                   -------- --------->HSFB2a(2)     --------->ARR14(2)--------->MYB46(3)    <---------ZAT6        ---------->DOF2 <---------HSFB2a(2) <-----------RAV1(2)  --------->ANAC46<---------ANAC46--------->ZAT6     <------- --------DOF2       ------>ZmHOX2a(1)   <-----------GT1   <-----------------AGL2      --------->AHL20(2)   cttttggaactggtgcttcatcctcaggttctacataaaaaatcacccaataagagcattactggtactggtagtaatactaaaacaattaaagcagatc  3150100           --------->ANAC46         --------->ANAC58         --------->ANAC58         --------->ANAC46       --------->AtMYB61       ----------->RAV1(1)       <---------ALFIN1      --------->ANAC46    ------->GAMYB    --------->AtMYB61    --------->ANAC46   --------->MYB46(3) ------>ANAC55(2) -------ANAC55(2)                                                                       <---------ICU4 -ZmHOX2a(2)                <---------DAG2                                             <---------YAB1 ---ARR11(3)                <----------DOF2                  <---------At4g35610------->GAMYB ->At4g35610   --------->TOE2(3)                  <------ZmHOX2a(1) --------->AtLEC2 --------->YAB1 --At4g35610----------->RAV1(1)       --------->TOE2(3)   <-------TEIL         --------->ANAC46   acataaccaccacacaacataaaaatccaacttttcagtaccttgatcaagaggaagcgattcatcttccctgcaatttcaacgaaatcacaattactca  3150200                                                 <---------At5g28300       --------->ANAC58                                                <<<<<<<<<GT-1              --------->ANAC46                                                <-----------GT1            --------->ANAC58                                         --------->CCA1(2) <---------GLK1(2)                                       --------->YAB1      <---------ARR11(3)                                    ---------->DOF2  --------->AtLEC2<---------ETT(1) <----------ID1           --------->TOE1(3)  --------->ARR11(3)     --------->SPL7          <-------- --------->ANAC46         --------->TOE2(3)  <---------ARR11(3)<---------YAB1        <-----------GT1   actacgacaaatcgaaaacagagctaaacctcaattcgcaaagataagatttaccttgcaagattatcagtccgaccacgacttgaattacctcctttag  3150300               --------->SPL7           ------>NtERF2              ----------->HVH21        --------->ANAC46             --------->LBD16------>NtERF2            --------->ANAC55(2)        --------->LBD16            --------->ANAC46--------->LBD16            <---------ANAC55(2)       --------->HSFB2a(2)           --------->HSFB2a(2)        <---------HSFB2a(2)           <---------HSFB2a(2)     <-----------GT1                                        <------MYB83       <---------ANAC58    <---------LBD16                                                <------MYB46(1)     <---------YAB1       <---------LBD16          <---------TOE2(3)                     <---------TOE2(3) --DOF2<---------ANAC58 <-----------GT1<---------ETT(1)         ------>ZmHOX2a(2)        --------->MYB59   atcgattatgcttcccgtaacccatttttccggcgattttcccgacaaatgcaaaggtttttttgatcggcttagggttttatatgtaaattaggttttc  3150400                                                     ------->MYC3                                                     <-------MYC3                                   -                                                     ------->MYC2                                ----                                                     ------->MYC4                               <----                                                     <-------MYC2                       <---------ANAC55(1)                                                     -------->ABF1                      --------->ANAC58                                                     <-------MYC4                       <---------ANAC58                  ----------->GT1                   --------->O2                        ----------->GT1          --------->ANAC58                          --------->ANAC55(2)                 --------->ANAC58          --------->ANAC58                          --------->ANAC46                    --------->ANAC55(1)          --------->ANAC46                          <---------O2                        <---------ANAC58         <------NtERF2                              <---------ANAC55(2)                 <---------ANAC46        --------->MYB52(1)                          --------->TGA1a                     --------->ANAC46        ------>NtERF2  <-----------GT1              =============================bZIP_DOF      <-----       ----------->HVH21           *TSS------------>CBF<-----------HVH21         --------->At5g28300<       --------->DEAR3(1)   --------->MYB52(1)      <---------TGA1a             ----------->GT1------      --------->ATERF1(1)   ------>MYB83         <---------ZAT18      <----------DOF2   <---------ANAC55(2)      --------->DEAR3(2)    ------>MYB46(1)      --------->ZAT18     <---------DAG2     --------->ANAC55(2)     --------->At4g35610  <---------MYB59 <------------CBF        <---------ALFIN1    <-----------GT1     <---------At4g35610  --------->AtMYB61      <---------ZAT14<-----------GT1--------->LBD16-------   taatggtagccgacggaacgatgttaaaccaaaccgaatcgaacaattgagtacacgtgtcatatatcacacctttcattcagggtaattacgtaatttt  3150500                                                                      --------->ZAT14                                                                      --------->ZAT18                                                                      <---------ZAT14                                                                  <---------------AtSPL8                                                             <-------MYC2                                                             <-------MYC4                                                             ------->MYC4                                                             <-------MYC3                                                             ------->MYC3                                                             ------->MYC2                                                            --------->TGA1a                                                            <---------O2                                                 --------->ATHB12---------->DOF2                 <---    --------->ATHB12                 --------->ARR14(2)     --------->O2                  <---------- -------->AHL20(2)               ----------------->AG       ================bZIP_DOF     <---------ANAC55(2) ----->YAB1                      ----------------->AGL1     <---------TGA1a              --------->bZIP60(1) -----YAB1           <---------MYB52(1)         <---------YAB1 --------->REM1(2)         --------->ANAC55(2) ----AHL20(2)       --------->At5g28300  --------->LBD16 --------->ZAT18                 --------->ANAC46 ---------AHL20(2) --------->TOE2(3) <---------ARR14(2)  <---------ZAT14                <-----------STF1 --->AHL20(2)      ----------->GT1--------->AtMYB61<---------WOX13(1) <-------TEIL     <-----------GT1 -->YAB1  <----------ID1         ----------------->AGL2  <---------ZAT18    ----------------------->TaNAC69(2)   aataaatgatttaagacaaaaccgtaattcccaaaaccaaaaccggacatatgattgagtacacgtgtaaagtacaccgcttggggtatttacgtcattt  3150600                                                                               ------>MYB46(1)                                                                               ------>MYB83                                                                            --------->MYB46(3)                                                                    --------->ZAT6                                                            --------->WOX13(1)----------->RAV1(1)           <---------ANAC58    <<<<<<<<<TBF1             <-----------HVH21------>NtERF2   --------->TOE2(3) <---------TOE1(3)                  ------->GAMYB    --------->DEAR3(1) --------GT1      <---------MYB52(1)                   --------->ZAT6    <---------ETT(1) -TGA1     <---------ANAC58 <<<<<<<<<TBF1        --------->ZAT6--------->YAB1--------->AtMYB61    ---   tacaacctcgatttcttcccgttaagcttcttcttcttctctctcactctcactctaacagtcagtcataactctccgaccaacattcacactctctcga  3150700                    <---------ARR11(3)                    --------->ARR11(3)                          <-----------GT1           -----------               ----------->TBP                                 <---------ZAT14            <---------ZAT6             --------->HSFB2a(2)   --------->GLK1(2)      <---------ANAC58              <---------ANAC46             <---------HSFB2a(2)<---------TOE2(3)         <---------ANAC58              <---------ANAC58   <---------ARR11(3)   ------>ZmHOX2a(1)                 <---------ANAC46              <---------ANAC58   --------->ARR11(3)  --------->TOE1(2)              <---------ANAC58               <------MYB83  --------->RVE1(1)--------->GLK1(1)              <------------CBF                   <------MYB46(1)  --------->CCA1(1)--------->CCA1(1)              <---------GLK1(2)         --------->At4g35610 ------>AHL20(2)   --------->RVE1(1) ------------>CBF <---------ANAC58      <---------At4g35610   tataatatctctcttctacaaatatccttcgattaagaatccaatttctctagattgtttgcttgtttactgtacattagctgtgctaggtcgtgttaat  3150800                                                         <---------DAG2                                                         <----------DOF2                   <---------At4g35610               ------>ZmHOX2a(2)            ------>ZmHOX2a(1)                       <------ZmHOX2a(2)           ==================================================================================MADS_MADS           --------------->AGL15                   --------->ARR11(3)          <---------ANAC58                         <---------ARR11(3)          <---------ANAC46    --------->ZAT2 <-----------HVH21<-----------GT1<---------------AGL15          <---------ANAC58    <---------ZAT2<---------bZIP60(1)              --------------->AGL15          ----------------->AGL1 ----------->GT1   --------->ARR14(2)    --------->ZAT14   <------------CBF--------->At4g35610      --------->bZIP60(1)          <---------ZAT18          --- >GT1   <-----------GT1       --------->STY1(2)    <---------ARR14(2) <---------ANAC46        <------ZmHOX2a(1)   ctgagaattgtttcctgtttcagcaaaaccctagctcgaaaaaatggtgtcacgatctgcttttttactcttctgtgtgctatttctagctacagaggag  3150900  Previous    Next  AGI:  At5g10070.1    Description:  RNase L inhibitor protein-related. similar to 80A08_4 [Brassica rapa subsp. pekinensis] (GB:AAZ67589.1); contains InterPro domain Possible metal-binding region in RNase L inhibitor, RLI (InterPro:IPR007209); contains InterPro domain Protein of unknown function DUF367 (InterPro:IPR007177) Range:  from: 3148523    to: 3150435    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g10080.1    Description:  aspartyl protease family protein. Identical to Aspartic proteinase-like protein 1 precursor [Arabidopsis Thaliana] (GB:Q9LX20;GB:Q0WVG6); similar to aspartyl protease family protein [Arabidopsis thaliana] (TAIR:AT4G35880.1); similar to 80A08_5 [Brassica rapa subsp. pekinensis] (GB:AAZ67590.1); contains InterPro domain Peptidase aspartic, catalytic; (InterPro:IPR009007); contains InterPro domain Peptidase aspartic, active site; (InterPro:IPR001969); contains InterPro domain Peptidase A1; (InterPro:IPR001461) Range:  from: 3150844    to: 3153381    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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