Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                           ---------->DOF2         <---------REM1(1)                                 --------->AHL20(2)    <---------YAB1                         ---------->DOF2--------->AHL20(2)  --------->YAB1                        ----------->RAV1(1)<---------AHL20(2)  <---------ICU4                       --------->ZAT18  --------->ARR11(3) -------->ARR11(3)                ---------->DOF2       <---------ARR11(3)--------->DAG2   aaaatcatgagttgtaagagcatccccatcagttttgaaagcccacaaagagaagaaagatttaatttgaaaccaaaaagtttttttgtcaaaaactgaa  3143300                                                                     <---------AHL20(2)                                                --------->TOE1(2) <---------ICU4                                          ----------->GT1         --------->ATHB51                                        <---------ANAC46          --------->AHL20(2)              <----------DOF2           <---------ANAC58          <--------ATHB1       --------->CCA1(2)                <---------ANAC58          <---------AHL20(2)              ---   --------->HSFB2a(2)          <---------AHL20(2)               --------->ICU4   --------->DAG2 <---   <---------HSFB2a(2)         --------->AHL20(2)              --------->YAB1    ---------->DOF2 <---  <---------ETT(2)        --------->AHL20(2)    --------->TOE2(2)<---------YAB1 <---------ATHB12 ----   aatgtcgagaaatgggctgtaagtaagtttatataaaattgggcttgtaacataagattgagaaataataatttatggcccaataaagtgttttgaacag  3143400                                      ----------->GT1                          --------->ATHB12     <---------AHL20(2)             --------->ICU4          --------->DAG2           --------->YAB1 <---------ICU4       <---------YAB1                                     --- ------>CCA1(2)          --------->ICU4       <---------AHL20(1)                      <------------CBF ------ARR14(2)      --------->AHL20(2)     <---------AHL20(2)                     >>>>>>>>>>>>>>>>>LFY ------GLK1(2)       <---------AHL20(2)    --------->YAB1      ------>NtERF2 <-----------TBP      === ----->ARR14(2)  <------ZmHOX2a(1)  ---------->DOF2    ------------>CBF <---------TOE2(3)         <--   atttgggtttcgataatgaggaataaaatgatttcacaaaaagtataatattatttggacaatgccgactaatcgaggtttttaaaaccattgtctgtaa  3143500                     --------->ANAC46                     --------->ANAC55(1) ------>MYB83                     --------->ANAC58    ------>MYB46(1)              <---------ZAT18        ------>MYB83              --------->ZAT18        -------->P          ---------->DOF2                            <              <---------ZAT14     --------->MYB46(3)  <----------DOF2                               <              --------->ZAT14   <-----------GT1     --------------->AGL15                     -------          <---------AtMYB61   <---------ATHB12   <-----------GT1     ---------->DOF2          <------        <------------CBF  ------------>CBF ------------>CBF     --------->MYB46(3)     ----------->GT1 ------------>AGL15  --------->ANAC58------>MYB46(1)<---------------AGL15------------>CBF   --------- ===================================================================MADS_MADS   ---------->DOF2  <--- -------------AGL15<---------ALFIN1--------->AtMYB61=================================================   ctaaaacaagtattggtgcacacacggtatcaataaaccaacctagccaattttctctttaaagaaaccatcaaagccaatagaaagtaatgtgatatga  3143600                    --------->KAN4(2)                   --------->HSFB2a(1)                   <---------KAN4(1)      ---------->DOF2  --------->TOE2(3)<---------HSFC1(2)          --------->ANAC58 --------->YAB1    --------->HSFC1(2)          --------->ANAC58          <----------DOF2 --------------->AGL15                  --------->ZAT14               <---------ARR14(2) <---------------AGL15                  <---------ZAT14               <---------ARR11(3) ---------TOE2(3)  <---------HSFB2a(1) <---------ALFIN1               --------->ARR14(2) ---------YAB1     --------->KAN4(1)  --------->LBD16            <---------ANAC46 -->ICU4      --------->ALFIN1       --------->ANAC58            <---------ANAC58 ---YAB1   --------->DAG2            --------->ANAC58  ----------->TBP------->TEIL >CCA1(2) ---------->DOF2------>ZmHOX2a(1)   ---------->DOF2     <---------ANAC58 ------WOX13(1)   <---------KAN4(2) <---------LBD16----------->GT1   <---------CCA1(2)            <-- ================MADS_MADS    --------->YAB1 --------->ZAT14    <-------TEIL        <------------CBF   ttaacataaaaagaaagtggaacattcctcattcaaaacccgcacactgaagccagtataaatagcttcgtgtatctttggcatagaattggagacagac  3143700                             <---------At4g35610                   --------------------->WRI1                <<<<<<<<<<<<<<<<<LFY                ----------->RAV1(1)             <------ZmHOX2a(2)             --------->CCA1(2)     <------NtERF2                        --------->DAG2        -------            <---------ARR14(2)     ------>NtERF2                      ---------->DOF2         -------            --------->ARR11(3)  <---------LBD16<---------YAB1      --------->MYB46(3)       ---------            <---------ARR11(3)  --------->At4g35610     --------->At4g35610              <------NtERF2            --------->ARR14(2)<---------DEAR3(1)        <---------At4g35610          ------->GAMYB        <------ZmHOX2a(1) <-------TEIL        --------->YAB1 ------->TEIL         --------->MYB52(1) -------At4g35610------------>CBF ----------->HVH21   <-----------RAV1(2)----------->GT1-------------   aactgatataggaagatccaacaatggattcatcggcggacatagcaatattagtggcagatgaatgtaaccaaaaggtgaatacaacggcagagaaagc  3143800                       <---------MYB46(3)                      <--------P                     <-------GAMYB                    <------MYB46(1)                    --------->MYB55(2)                    <---------MYB46(3)                    <------MYB83                   <---------AtMYB61                   --------->ALFIN1                 <------MYB46(1)                 <---------ANAC46                 <------MYB83                 <---------ANAC58                 <---------ANAC58                <------MYB46(1)                --------->MYB111(1)                <---------MYB46(3)                <------MYB83                --------->MYB55(2)                                                                 --              --------->ALFIN1                                                                    <--             <-------GAMYB                                                                        ---            <---------MYB46(3)                                                                    ---       <---------At4g35610                                                                      <----       --------->At4g35610                                           <------ZmHOX2a(1)        ------- -->ANAC58  --------->MYB55(2)                                      ----------->GT1           <------ -->ANAC58 <---------AtMYB61  --------->ATHB12          ---------->DOF2                     <-------- ->DOF2<---------LBD16<---------WOX13(1) <---------TOE2(3)     <---------At4g35610          --------- -------->WRI1<--------P     <---------YAB1<------ZmHOX2a(1)   --------->At4g35610         <---------MYB52(1)   atcgaatacagcggaggttgggtggttgatgatgtttgggattgaggagaagaagattgaaagtctgatgaggaaatttgaagctaaatctcagtttgct  3143900    <XXXXXXXXXXXXXXXXXXXXMIR841B    <---------ARR14(2)   <-------GAMYB  <---------MYB46(3)  <---------DEAR3(2) <---------ANAC58 <---------ANAC46 <---------ANAC58 <---------RAP2.6(2) <---------DEAR3(1) ---------->AtMYB77 -------DEAR3(1)                                                ------->TEIL ------>ALFIN1         <---------At4g35610                     <-----------GT1 -------->HVH21        --------->At4g35610               <---------ANAC55(2) -------RAV1(1)    <-----------GT1                       <---------TGA1a                    --------- -->At4g35610  <----------DOF2                           <---------O2         --------->GLK1(2) ---At4g35610 <---------ANAC58                           --------->TGA1a      --------->ARR11(3) -ZAT14       <---------ANAC46                           --------->O2        <---------GLK1(1)    <-- >ZAT14       <---------ANAC58  <---------YAB1      --------->ANAC46         --------->GLK1(1) ------   gtggcggtttctagtggcttttttctgcttaactatgtttcatccttgtactataagtcacgtttgaacctcatgctggaaatctagtttaggcatgatg  3144000                                                                       <-----------GT1              <                                               <---------ANAC46<---------AtMYB61     --------->MYB52(2)                                      <----------DOF2        <----------DOF2       <---------MYB52(1) <----------DOF2   --------->MYB46(3)<---------ANAC58     --------->ANAC58         <--------P   ----- >ICU4    <---------ANAC58           <---------ANAC46     --------->ANAC58  <----------DOF2 <-------- ---------GT1      <---------ATHB12  <---------ANAC58 <---------HSFB2a(2) <---------------AGL15 <---- ----->GT1<---------ANAC58      <-----------RAV1(1)   --------->HSFB2a(2) --------------->AGL15 <----   ttactttcatttgcttctctaatcaccagagggcatgttgctttaagtttcgagttctacaagctttggttttatactcttttgggttagtttttaagta  3144100   <---------ANAC46   <---------ANAC58   <---------ANAC58               ----------->GT1                                 <---------AHL20(2) ---------GLK1(2)          <---------ANAC46                                       --------->AHL20(2) ---->ZAT14                <---------ANAC58                                   --------->AHL20(2)    < -------AtSPL8             <---------ANAC58            --------->ICU4         --------->ICU4        < ---TEIL                  <------NtERF2        --------->YAB1             <-------TEIL              < -----ZAT14             --------->ALFIN1      <---------ATHB12         --------->At4g35610      <----   cagtttcttgtaagttaatggaaacggtgtcgtagtaagaaaaaacaaatcatcgtagtaattaagcctaatccgatgcattaattaatctctgaaattt  3144200  Previous    Next  AGI:  At5g10040.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G65207.1); similar to 80A08_3 [Brassica rapa subsp. pekinensis] (GB:AAZ67588.1) Range:  from: 3143724    to: 3144158    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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