Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100      ---------->DOF2 <------NtERF2 ---------DEAR3(2) ----->NtERF2              --------->ARR14(2) --------DEAR3(1)          ------------>MYB.PH3(1) --------At1g77200         ------->TEIL --------HVH21             <---------ARR14(2) ---->O2         <---------YAB1               --------->ARR14(2)         <---------WOX13(1) -----O2      <---------RVE1(1)               <---------ARR14(2)       <---------MYB46(3) ---->TGA1a  <---------ARR11(3)          <---------ARR14(2)            --------->ATHB12 -----TGA1a  <---------GLK1(2)           --------->GLK1(2)          <---------ANAC46 --->MYB46(3)--------->ARR11(3)          --------->ARR14(2)         <---------ANAC58        --------- ->HVH21    <---------RVE1(1)   <---------MYB52(1)                  <---------ANAC58   <-------------   gtcggcgaaaggagagatttttatcgatgaatccgttatggagaatcggattccaagagattagagattggggtgattgcaatttcgaaggcgagaataa  3126300                                                                                <------NtERF2                                                                                --------->At4g35610                                                                               *TSS                                                                            <-----------HVH21<-------                                                                        <---------MYB52(1)   <-------                                                                       <---------At4g35610   <-------  <---------YAB1                                                  --------->GLK1(1)     <---------ARR14(2) >YAB1                                                            <---------GLK1(1)----------->GT1 --------WRI1          <-----------HVH21<---------TOE1(3)--------->YAB1<-------GAMYB    --------->ARR14(2)   cattgtgaatggttttagctctattcgtcagaaaccattgttaagcttcgagtcgacgataacaatggatttcagttgtgtcagcgagaaaatttgcgtc  3126400                         --------->DAG2                        ---------->DOF2                                 --------->YAB1                     --------->ANAC46                     <-----------GT1                         <--                     --------->ANAC58      --------->DOF5.7(2)          --------->ATHB12          <-- --ANAC58            --------->ANAC58      <---------MYB52(1)------->GAMYB       <---------AHL20(2)<- --ANAC58   --------->YAB1     ------>ZmHOX2a(1) <------------CBF      <---------YAB1         <------ --ANAC46 ------------>CBF   --------->ZAT18 <---------DOF5.7(2)    <---------YAB1     <-----------GT1   aagtttagaaacaacaatatttcacgaaaagtcctctgtttatgcgttaactattgaaaataaccccattactatcatttgagttaatttgaccttcttt  3126500                                                                                        <-------MYC2                                                                                        ------->MYC3                                                                                        ------->MYC2                                                                                        <-------MYC3                                                                                        ------->MYC4                                                                                        <-------MYC4                                                                                        ------->PIF5                                                                                        <-------PIF5                                                                                        ------->PIF4                                                                                        <-------PIF4                                                                                       --------->O2                                                                              ------>MYB83                                                                              ------>MYB46(1)                                                                            --------->AtMYB61                                                                    --------->ANAC55(1)--------->ANAC55(2)                                                                    <---------O2       <---------O2                                                                    --------->ANAC55(2)--------->TGA1a                                                     --------->ANAC58       <---------ALFIN1                                                     --------->ANAC46      --------->At4g35610   --------->At4g35610        <---------MYB46(3)     --------->ANAC58    <---------ALFIN1 <---------- -------ANAC58          ----------->RAV1(1)    --------->At4g35610  --------->ANAC58   <---------TGA1a -------ANAC58          <---------ALFIN1       <---------At4g35610  --------->ANAC46  ------->TEIL ----------HVH21     <---------ALFIN1        <---------ZAT18        --------->ANAC58 <------------OsbHLH66 ----DOF2            --------->AtMYB61       --------->ZAT18 <-----------GT1--------->DEAR3(1)<------   gcgtcatatgcaaaatcggaacaccaccacattggtttggaggtttgtgagctacaagcctataaactacacgtagcacctccctatgcacgtgtcacat  3126600                                                                                                    -                                                                                                    <            --------->ALFIN1                                                                      ---        <---------TOE1(3)                            <<<<<<<<<<MYB80                      --------->ANAC58 --------->ATHB12     <---------YAB1                <------MYB83                          --------->ANAC58 -HVH21 <---------TOE2(3)                           <------MYB46(1)               <-------TEIL------- ---ANAC55(2)    <---------At4g35610          <-------TEIL            <-----------GT1   ---------->DOF2   gaatgattttaagggtttgggctgatgtttgagctataactacatatatacatttggtttgattcgtttttcttacattatagtttcatcaaaagccaaa  3126700           =======================HOX2a_HOX2a       <---------WOX13(1)   <---------WOX13(1)  <------------CBF                                                        --------->ANAC58 --------->ATHB51                                                     --------->YAB1 --------->ATHB12                                                  --------->AtMYB61 -------->ICU4                                                  <-----------GT1 ---------YAB1             ------>ZmHOX2a(1)                  --------->ARR11(3)   --------->MYB52(1) ------>YAB1     --------->ZAT18   --------->YAB1             <---------ARR11(3) <---------MYB52(2) --->DOF2  <------ZmHOX2a(2)    --------->REM1(1)    --------->ARR11(3)   --------->ANAC58   gcataattgatggatcaagtactctactcctcttacatcataaaaatccctgtaatatcacgaatatcaccatcacaagctcaacttacgaccaggctca  3126800                                                                                                  <--                                                                                              -------                                              <------MYB83                                  <------MYB46(1)                                              <------MYB46(1)         ----------->GT1       <------MYB83                <---------ANAC58     --------->ICU4                  --------->DAG2      <---------MYB52(1)                <---------ANAC58--------->ANAC58                    ---------->DOF2     --------->LBD16   --------->ANAC58         <---------HSFB2a(2)             <---------GLK1(2)          --------->HSFB2a(2)   --------->ANAC46         --------->HSFB2a(2)         ---------->DOF2        --------->ATHB12 -----   --------->ANAC58        --------->ETT(2)  <---------AtMYB61   <---------ANAC46      <---------HSFB2a(2) --------->ZAT6 <---------ANAC46--------->ANAC58--------->ALFIN1 <---------ANAC55(2)  <---------LBD16   ataacacgacttattttggcttgtcatcgtcgagaggcaattttgggaaggtgtttgcaaaagagtctcgtaaagtgaaactgattagtccggaaggtga  3126900                                                      --------->LBD16                                             --------->LBD16                                           <---------At4g35610                   <-----------HVH21                                           <---------LBD16                      <------MYB83                                         <---------DEAR3(1)                     <------MYB46(1) <----        --------->CCA1(2)     <---------ANAC58      <---------LBD16            --------->MYB59 ------ ----ZmHOX2a(1)               <---------ANAC58      --------->TOE1(2)         <--------P <---------ANAC58 -->ALFIN1               <-----------RAV1(1)<---------ANAC46   --------->At4g35610       <---------ANAC58 ---->ALFIN1             <---------MYB46(3)--------->At4g35610 <---------At4g35610 <-----------RAV1(2)   ggagcaagagatagaaggaaacgaagattgttgcatacttgagtctgcggagaacgcgggacttgaactgccatactcgtgtaggtcagggacttgtggg  3127000                                                                                         ------->MYC3                                                                                         ------->MYC2                                                                                         <-------MYC2                                                                                         <-------MYC3                                                                                        <---------ANAC55(2)                                                                                        <---------O2                                                                                        <---------ANAC46                                                                               ----------->ARR10                                                   <---------ANAC58       --------->DAG2<---------TGA1a                                <------ZmHOX2a(2)  <---------ANAC58     ==========================bZIP_DOF                    >>>>>>>GRF7 =======================HOX2a_HOX2a  <-------TEIL        --------->O2                 <-----------HVH21--------->WOX13(1)   <---------TOE2(3)---------->DOF2 --------->TGA1a     <---------ANAC46    --------->DAG2         ------>ZmHOX2a(1) <---------ARR14(2)    --------->ANAC55(2)     <---------HSFB2a(2)---------->DOF2         ==================================================bZIP_DOF   <---------ANAC46<-----------RAV1(2)  --------->STY1(1)<------ZmHOX2a(1)<---------TOE2(3)     <---- -----PCF2    <------MYB46(1)   ================================HOX2a_HOX2a----------->GT1  <-------- ----->HVH21  <------MYB83  --------->ALFIN1    <----------DOF2   --------->ARR14(2) ------>ZmHOX2a(1)   acatgttgtggaaagttggtgtcagggaaagtggatcagtcactagggtcctttcttgaggaagagcagattcaaaaaggttacatcctcacgtgtatcg  3127100                                                                    <---------ANAC58                                                                    <---------ANAC58                                                                    <---------ANAC46                                            ------>ZmHOX2a(2)  <---------ANAC58                                           <------ZmHOX2a(2)   <---------ANAC58                                 --------->ANAC58           <-------MYC3                           --   --------->ZAT6                --------->ANAC58           ------->MYC3                     -------- -----ZAT18              --------->ZAT6   --------->ARR14(2)------->MYC2         <---------GLK1(1) <- -CCA1(2)       <-----------RAV1(1)       <---------ARR14(2)<-------MYC2   <----------DOF2   <-------   cacttccactagaagattgtgttgtttacactcacaaacaatccgatcttatatgagttacacatgcctgccttgaacttttgaaatctcagtattaaaa  3127200  Previous    Next  AGI:  At5g09995.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G08530.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN81396.1) Range:  from: 3125039    to: 3126379    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g10000.1    Description:  ATFD4 (FERREDOXIN 4); electron carrier. similar to ATFD3 (FERREDOXIN 3), electron carrier [Arabidopsis thaliana] (TAIR:AT2G27510.1); similar to unknown [Populus trichocarpa] (GB:ABK95610.1); contains InterPro domain 2Fe-2S ferredoxin, iron-sulphur binding site; (InterPro:IPR006058); contains InterPro domain Ferredoxin [2Fe-2S], plant; (InterPro:IPR010241); contains InterPro domain Beta-grasp fold, ferredoxin-type (InterPro:IPR012675); contains InterPro domain Ferredoxin; (InterPro:IPR001041) Range:  from: 3126710    to: 3127156    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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