Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                 <-----                             <-------TEIL                                                --------->ANAC58  --------->ANAC46   ------>ZmHOX2a(1)                                                   --------->ANAC58 ------>ZmHOX2a(1)  --------->TOE1(3)                                                --------->ANAC58 -->ANAC58          --------->TOE2(3)         <---------ZAT14                        --------->ANAC58 -->ANAC58   <---------CCA1(2)       ------->TEIL                     --------->TOE1(1)---------->DOF2   ttcctcgctatttccatctcttccttaaacgtacacatgaactcttccttcactgtcttccccattgaaacctcgaactcttgactcaagaaagcaactt  3099800                                                                      <---------ANAC58                                      <-------TEIL             <---------At4g35610          <------NtERF2                                     <---------ARR11(3)        <---------ZAT2              ------>NtERF2                                     <---------ARR14(2)        --------->At4g35610      <---------DOF5.7(2)                                     --------->ARR14(2)     ------>ZmHOX2a(1)          ----------->HVH21                                 <-----------RAV1(2)      ------>ZmHOX2a(2)            --------->WRKY12                            ------>ZmHOX2a(1)             ----------->RAV1(2)          --------->WRKY38(1)                            --------->LBD16             <---------ARR11(3)       <---------ALFIN1                            =====================================HOX2a_HOX2a    <---------ZAT14                        <---------ARR14(2)              --------->ARR11(3)      --------->ZAT14                   <-----------GT1  <---------GLK1(2) <---------YAB1  <---------ANAC46--------->DOF5.7(2)     <---------ANAC58<---------ANAC55(2)           <---------MYB52(1) <---------ANAC58<---------MYB52(1)     <---------ANAC58--------->ANAC55(2)     <---------WRKY18(1)     ---------->ID1  <-------GAMYB  - -----DOF2 ---------->ID1 <---------ANAC46  ----------->HVH21  --------->ZAT2----------->RAV1(2)  <--   tcaaattgggtttggcccaaatcacgtttcctgaatcaggttcttcttgacccgttatgatcctgagctgtgtcgtcttccctgcaccgttgacgccgat  3099900                                        <----------DOF2                                        ------>ZmHOX2a(1)                               <-----------HVH21                              --------->ANAC58                              --------->O2                              --------->TGA1a           <-----------GT1    --------->bZIP60(2)      <----------DOF2         =====================bZIP_DOF      ==================================bZIP_DOF                                                -----      <---------DAG2          --------->ANAC58                                                  ----- -------->ZAT6 <----------DOF2--------->ANAC46                                                ------>NtERF2 ---------GT1  =========================bZIP_DOF  <---------MYB52(1)     <---------TOE2(3)   --------   taaccctactttttctcctttcttcacttcccaagtcacatcctttagcaccgtaatgccttcatagctcttactaatgttctcaagtctcactcccgac  3100000                                                                                              -------                                                                                              <------                                                                                              <------                                                                                           --------->ARR14(2)                                                                                           <---------ARR14(2)                                                                                         --------->LBD16                                                                                        <---------ANAC46                                                                                       <------NtERF2                                                                                       <---------At4g35610                                                                                       --------->At4g35610                                               ----------->GT1                         <---------LBD16                                              ------>ZmHOX2a(2)                       <---------ERF1           >>>>>>>>>>>>>>>>>LFY              <------ZmHOX2a(2)     --------->ZAT2    <---------RAP2.3(3)           ------->TEIL              --------->At4g35610           <---------ZAT2    <---------DEAR3(1)        --------->ANAC58             <---------At4g35610     --------->ARR11(1)  --------->ATERF1(1)        --------->ANAC58  <---------ANAC58  <---------ARR14(2) <-------TEIL     --------->ZAT2<------ ---->ANAC58           <---------WOX13(1)   <---------MYB52(1)--------->GLK1(2) <---------At4g35610-- ---->ANAC58         --------->ATHB12--------->ZAT2  --------->CCA1(2)          --------->At4g35610<- ->LBD16--------->ANAC46  <---------ANAC58  --------->ARR14(2)--------->CCA1(2) <---------ZAT2-------   gaaatcgaagacgcaccattgtttgattgcttactgatcagcttccgatcggtagataagagagattcgagctctgaattggagctggctgcggaaacgt  3100100                                                                      --------->ANAC58                                                               --------->ALFIN1 -->TGA1a                                                     --------->ZAT14 ---O2         <---------ARR14(2)                             <---------ZAT14 ---ANAC55(2)  <---------KAN4(2)                             <---------REM1(1) ---TGA1a      --------->ARR14(2)                            --------->ALFIN1   <---------YAB1 ------->At4g35610                                       ---------->DOF2      <---------ZAT6 --------At4g35610         <---------ZAT6<------ZmHOX2a(1)--------->DAG2    --------->YAB1        <-- -->O2    <---------LBD16 <---------TOE1(3)         ----------->GT1   --------->ANAC58   >>>>>>>>>TBF1   gagctctaatattggggaatactcgtctagggttagaaacagaggagagtttgaaggtgaaaagtgtagggcaagtaatagtattagtgaagaagaaggt  3100200                                    --------------->AGL15                                    <---------------AGL15                                   ----------------->AGL1                                  >>>>>>>>>>>>>>>>>LFY                                   <---------WOX13(1)                                 <-----------GT1                                        >>>>>>>>>ARR2    <---------TOE2(3)        <---------MYB52(1)                                         <------------CBF    <---------TOE1(2)     ---------->ID1   <------MYB46(1)                             --------->ATHB12    <---------TOE2(2)  <-------TEIL<---------YAB1                             ------->TEIL    ------- -------SPL7         <---------GLK1(2)     <------MYB83            ----------->GT1    <---------YAB1   cgaacgaaggtttaagctatagagattcgtcgttaataccattgttggtataaaatgttagacatcaaacgattaaaacgaagctattttgattgttaaa  3100300                                                                                    <---------At4g35610                                                                      --------->ANAC55(1)                                                                      <---------TGA1a                                                                      --------->ANAC58                                                                      --------->ANAC55(2)              <---------WOX13(1)         --------->ALFIN1             --------->TGA1a             <------------CBF          <---------ANAC46               <---------ANAC55(2)             >>>>>>>>>ARR2             <---------ANAC58               --------->ANAC58            --------->ATHB12           <---------ANAC58               --------->ANAC46             <-      <------MYB83           --------->HSFB2a(1)            --------->ANAC58        --------->At4g35610      <------MYB46(1)        <---------HSFC1(2)             <---------MYB52(2) ------->MYC3      ----  <---------REM1(1)  --------->ZAT6    <---------ANAC55(1)  --------->ANAC58   <-------MYC3      <--- --->DOF2  <---------YAB1    --------->HSFC1(2)         <-----------HVH21    ------->TEIL    <-------TEIL   gaaaatgtaggttttgattgttaactctcgaggcttctatagcgtgtgagcgaagaagtgtcacgaacacacacgtatgcatgtgaagctcaaggctcat  3100400                                                       <---------WOX13(1)                                                      <---------ARR14(2)                                                    --------->LBD16         <-----------HVH21                        <---------LBD16       <-------MYC3                               <---------At4g35610       <-------MYC4                            --------->TGA2(2)       ------->MYC4                           <-----------TGA1       ------->MYC2                           <-----------HVH21       ------->MYC3                          --------->O2       <-------PIF5                          --------->ANAC46       ------->PIF5                          --------->ANAC58       <-------MYC2                          <---------bZIP60(1)      <<<<<<<<<<ABI5                         <---------TGA1a      <<<<<<<<<<AtMYC2                       --------->bZIP60(1)      <---------TGA1a                        <---------ANAC55(2)      <<<<<<<<<<HY5                          --------->ANAC55(2)      --------->O2                           --------->ANAC58      --------->TGA1a                        --------->TGA1a      --------->ANAC55(2)                    <---------O2      <---------ANAC55(2)                    --------->ANAC55(1)      <---------O2                 --------->HSFB2a(2)--------->ARR14(2)      <--------ABF1                <---------HSFB2a(2)<------------CBF                           <---      --------->bZIP60(2)       ----------------------->TaNAC69(2)                      --------->ZAT14     <<<<<<<<<<<<AtMYC2--------->MYB46(3)    --------->bZIP60(2)   <---------ZAT18      <---------ZAT18 -----------CBF      <---------ARR14(2)     <-----------STF1  --------->ARR14(2)        <---------ZAT14 ----->AHL20(2)      --------->ARR14(2)    <---------ALFIN1   <---------ARR14(2)        --------->ZAT18 ------AHL20(2)  --------->LBD16<-----------GT1----------->HVH21   --------->ZAT18 <---------MYB52(1)   aaattgccacgtgtcaaaccgcataaccactatttttctagattaccacgtcaccggattgacaaatcgggcactagtctcacccgtttgtgcacattac  3100500                                                                                                    <                                                                                                   --                                                                                                   --                                                                                                   <-                             <---------ICU4                                                       ---                  <---------ANAC58                                                                <--                  <---------ANAC58<---------At5g28300                                             ---                <---------YAB1--------->WOX13(1)                                   <---------ALFIN1<-             <---------YAB1 <---------YAB1                  --------->ZAT6<---------YAB1     ------>ZmHOX2a(1)       <---------TOE1(2)  --------->YAB1          <------ZmHOX2a(1)    <---------YAB1       --------- -------DOF2 --------->ICU4 <---------ATHB12    <---------TOE2(3)     <-----------GT1  <---------ICU4   tttggtttctaggttattattcgtgcattaatcattcaccgatagcaaataaggaaaacaaaacactaggtttatcaatatagtcacactcattcctaaa  3100600           --------->AHL20(2)       <---------AHL20(2)       --------->AHL20(2)     ----------->GT1                                               <---------AHL20(2)     <---------ANAC55(2)                                           --------->AHL20(2)     --------->ANAC55(2)    <-------TEIL                     ----------->GT1 ---------YAB1              <---------ZAT14                 <---------TOE1(3) ------->AHL20(2)           --------->ZAT18                 <---------TOE2(3) ------->AHL20(1)           --------->ZAT14            <-----------ARR10                 ---------->DOF2 --------AHL20(1)      ---------->DOF2                 --------->ARR11(3)          ------>ZmHOX2a(2) ------>AHL20(2)    <-----------HVH21          ----------->GT1    --------->ICU4  <------ZmHOX2a(2) -------AHL20(2)--------->DAG2                --------------->AtSPL8             --------->ARR11(3) ------>YAB1   ---------->DOF2                <---------------AtSPL8             <---------ARR11(3) --------AHL20(2)  <----------ID1             --------------->AtSPL3         <-----------GT1 >TOE2(3)  <---------AHL20(2)      --------->ICU4      <---------ARR11(3)  <-----------HVH21   ttatattaagtaattaaaaaagcgtcaaagtacagtacttatgtcgaaatcgtacaatatctaaggtaattaatctatgtcacgatcttaagaaagaact  3100700  Previous    Next  AGI:  At5g09930.1    Description:  ATGCN2 (Arabidopsis thaliana general control non-repressible 2). similar to ATGCN5 (Arabidopsis thaliana general control non-repressible 5) [Arabidopsis thaliana] (TAIR:AT5G64840.1); similar to 80C09_14 [Brassica rapa subsp. pekinensis] (GB:AAZ41825.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71760.1); similar to ABCF-type protein [Zea mays] (GB:NP_001105535.1); contains InterPro domain ABC transporter related; (InterPro:IPR003439); contains InterPro domain AAA+ ATPase, core; (InterPro:IPR003593) Range:  from: 3097644    to: 3100242    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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