Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                     <---------ANAC58                                  <---------MYB46(3)                                 <---------TOE1(2)  <-----------HVH21                              --                      <---------MYB52(1)            --------->LBD16                                --                     --------->LBD16          --------->ZAT14                                 -------                     <-----------HVH21  ----------->RAV1(1)                                 <--------                 <---------ARR14(2)<---------ANAC58--------->ANAC46     <---------YAB1    <---------ICU4                 --------->ARR14(2)<-------GAMYB-------->P           <---------AHL20(2)   --------->YAB1          --------->MYB46(3) <---------YAB1------->GAMYB             --------->AHL20(2)  --------->ICU4   aattgctaataaacgaccatttccgtcaattctccttggttgcaacagtctacccgtcaaatgtttactaatttataagtgtgaagtttgaattatgaaa  3051700     ----------->GT1                     <---------GLK1(2) ------->ANAC58             <-----------GT1 ------->ANAC58          <---------KAN4(2)              <-----------HVH21 --->DOF2               --------->YAB1   <---------ARR11(3) <---------O2                <---------At4g35610 -YAB1     <---------AHL20(2)            --------->ARR11(3) --------->O2         <---------MYB52(1)   gacgaaatcgtattaaaaattcacaagaataaacaactccatagattttcaaaaaaacagtcacgagaaaaaaaccacagtccgtttgtctgctcttcta  3051800             --------------->AGL15             <---------------AGL15            ----------------->AGL3            <-----------------AGL3         <---------AHL20(2)       <---------YAB1                     --------->AHL20(2)             --------->DEAR3(1)      <---------AHL20(2)                  <---------AHL20(2)        ---------->DOF2               <--      <---------AHL20(1)            <---------HSFB2a(2)         ----------->RAV1(1)     ------>ZmHOX2a(1)    <---------YAB1                  --------->HSFC1(1)         --------->MYB46(3)      --------->TOE2(3) <---------YAB1  --------->YAB1     --------->HSFB2a(2)       --------->SPL7  ----------->GT1--------   gtttttattatttttctattaatagttttttgttatttcgagaataaaatttgaacgatgtccgaaccacaaaagccgagccgataaatcctaagccgag  3051900                                 ------>NtERF2                               --------->LBD16                        <---------O2                        --------->ANAC58                        --------->O2                        --------->ANAC58                       <---------At5g28300                       <---------LBD16                     ----------->HVH21                        --------->MYB52(1)         --------->ANAC46      <---------LBD16           --------->ICU4         --------->RAP2.6(2)  <---------LBD16          --------->YAB1                            ----   <----------DOF2 --------->WOX13(1)                 <---------ATHB12                        =======   --------->TOE2(3)<-----------HVH21   <---------AHL20(2)<---------ICU4                      ------- -------MYB59  ------->GAMYB------>NtERF2--------->ATHB12<---------YAB1                     --------- ->DEAR3(1)   --------->MYB46(3)--------->LBD16     <---------ARR14(1)   <------ZmHOX2a(2) --------->MYB52(1)   cctaactttagccgtaaccatcagtcacggctcccgggctaattcatttgaaccgaatcataatcaacggtttagatcaaactcaaaacaatctaacggc  3052000                <---------At4g35610                --------->At4g35610           <---------MYB46(3)          <-----------HVH21          <---------At1g77200         <---------At4g35610          <---------DEAR3(1)          --------->At4g35610         <------NtERF2                --------->TGA1a        <-----------HVH21             --------->bZIP60(2)       --------->O2  ---------->DOF2  --------->O2       =========================bZIP_DOF                              <---------AHL20(2)       =========================bZIP_DOF   <---------YAB1        <---------RVE1(1)       <---------TGA1a              <-----------RAV1(2)         <---------GLK1(2)       <---------O2  ===========================bZIP_DOF        <---------ARR11(3) ------->RAV1(1)----------->GT1  --------->ANAC58               <---------ARR14(2) ================MYC_MYB         --------->ANAC58               --------->ARR14(2)                 -- >GAMYB--------->TGA1a         =================bZIP_DOF      <---------TOE1(2)   --------->YAB1  *TSS >RAP2.6(3)<---------DEAR3(2)  ---------->DOF2    <------------CBF   <---------AHL20(2)       -------   aacatagacgcgtcggtgagctaaaaagagtgtgaaagccaggtcaccatagcattgtctctcccagattttttatttgggaaataatagaagaaataga  3052100                                                                                    <---------MYB52(1)                                                                                   <-------GAMYB                                                                             ------>NtERF2                                                                             <---------At4g35610                                                                            <-----------RAV1(1)                                                                          <---------At4g35610                                                                          --------->ZAT2                                                                          ----------->RAV1(2)                                                                          ====================RAV                                                                          <---------ZAT2                                                                          --------->At4g35610                                              ------->TEIL             <---------At4g35610                                          <-------MYC3                 --------->At4g35610                                          ------->MYC3                 <---------ZAT2                                          <-------MYC4                --------->MYB52(2)     ---------->DOF2                      ------->MYC2            <---------ZAT6  <-----------RAV1(1)    --------->AHL20(2)                    <-------MYC2        ------>ZmHOX2a(1) <---------At4g35610 ------->AHL20(2)               <---------AHL20(1)           --------->TOE2(3)  ------>NtERF2 ---->GT1    ----------->GT1    <---------ARR11(3)       <----------DOF2 <-----------RAV1(1)  ------>ZmHOX2a(1)   aaaaaataaaagagtgagaaaaatcgtagagctatatattcgcacatgtactcgtttcgctttccttagtgttagctgctgccgctgttgtttctcctcc  3052200                               --------->HSFC1(2)                               <---------HSFC1(2)                               <---------HSFB2a(1)                               --------->HSFB2a(1)                              ------->TEIL                              <-----------ARR10                                   <----------DOF2                              <---------ARR14(2)                             <---------MYB52(1)                              --------->ARR14(2)                          <-------TEIL                              <---------ARR11(1)                          ------>ZmHOX2a(2)                             <---------CCA1(2)                           <------ZmHOX2a(2)          -                             <---------ARR14(1)                         <---------ARR11(3)        <--                          --------->HSFB2a(2)                           --------->ARR14(2)   <-------        <----------DOF2   <---------HSFB2a(2)       <<<<<<<<<TBF1       <---------AGP1   <-----------GT1    <---------CCA1(2)     --------->HSFC1(1)     <<<<<<<<<TBF1          --------->AGP1   <-----------RAV1(1) <-----------GT1     <---------At4g35610 --------->YAB1                 <---------ARR14(2)<---------At4g35610   atttctctatctttctctctcgctgcttctcgaatcttctgtatcatcttcttcttcttcaaggtgagtctctagatccgttcgcttgattttgctgctc  3052300                                       ------>ZmHOX2a(2)                                      <------ZmHOX2a(2)                                     <---------AGP1<---------ANAC58        <---------YAB1               --------->AGP1<---------ANAC58                    <--------P     --------->ICU4                  <---------ARR14(2)                               <-------GAMYB     <---------YAB1                  --------->ARR11(3)                <---------ARR11(3)        <---     <---------MYB52(1)              --------->ARR14(2)                --------->ARR11(3) <---------ANAC46  ---------->ID1                     <---------ARR11(3)                <-----------ARR10  <---------ANAC58 -------->MYB52(2)          --------->ARR14(2) <---------ANAC58        --------->GLK1(2)  <---------ANAC58 -------MYB52(1)           <---------ARR14(2)  <---------ANAC58 <---------YAB1       <---------MYB46(3) --At4g35610  <---------GLK1(2)    ----------->ARR10    <---------AtMYB61         <---------LBD16----   gttagtcgttattgttgattctctatgccgatttcgctagatctgtttagcatgcgttgtggttttatgagaaaatctttgttttgggggttgcttgtta  3052400               <---------MYB46(3)              <----------DOF2             <---------ANAC58             <---------ANAC58                                             --------->ARR14(2)          --------->LBD16                                                 <---------ARR14(2)         --------->ANAC55(2)                                              <---------GLK1(2)         <---------ANAC58                                                ============================         <---------ANAC46                                 ======================HOX2a_HOX2a         <---------ANAC58                                 <------ZmHOX2a(2)        ------>ZmHOX2a(2)                                --------->AGP1  <------ZmHOX2a(1)       <------ZmHOX2a(2)       <---------At4g35610       <---------AGP1<---------TOE2(3)      <---------ARR14(2)       --------->At4g35610       <---------ARR11(3)                    ------      --------->ARR14(2)   ------>ZmHOX2a(2)             --------->ARR11(3)                --------->ETT(2) ------ANAC55(2)         <---------AGP1   <---------TOE2(3)------>ZmHOX2a(2)            <-----------RAV1(1) ----->ANAC55(2)       ------>ZmHOX2a(2)  <---------TOE1(3)=====================HOX2a_HOX2a<---------ETT(2)   tgtgattcgatccgtgcttgttggatcgatctgagctaattcttaaggtttatgtgttagatctatggagtttgaggattcttctcgcttctgtcgatct  3052500                                                                                                  ---                                                                                                <----                                                                                                <----                                                                                                <----                                                                                                <----                                                                                                <----                                                                                                <----                                                                                                <----                                                                                                -----                                                                                               ------                                                                                               ------                                                                                               ------                                                                          ----------->GT1      ------                                                                   <---------WOX13(1)          ------       <---------YAB1     <---------ANAC46                       --------->ATHB12             <------    <---------MYB52(1)  <---------ZAT14               <---------ANAC58  ------>ZmHOX2a(2)    <------- =HOX2a_HOX2a           --------->ZAT14               <---------ANAC46--------->ARR11(3)    <-------- >ZmHOX2a(2) ---------->ID1                           <---------ANAC58<---------AGP1      ------>ZmHOX2a(2)   ctcgctgttatttttgtttttttcagtgaagtgaagttgtttagttcgaaatgacttcgtgtatgctcgattgatctggttttaatcttcgatctgttag  3052600  Previous    Next  AGI:  At5g09810.1    Description:  ACT7 (actin 7). Identical to Actin-7 (ACT7) [Arabidopsis Thaliana] (GB:P53492;GB:P53495); similar to ACT3 (ACTIN 3), structural constituent of cytoskeleton [Arabidopsis thaliana] (TAIR:AT3G53750.1); similar to ACT1 (ACTIN 1), structural constituent of cytoskeleton [Arabidopsis thaliana] (TAIR:AT2G37620.1); similar to ACT1 (ACTIN 1), structural constituent of cytoskeleton [Arabidopsis thaliana] (TAIR:AT2G37620.2); similar to actin [Brassica napus] (GB:AAD03741.1); similar to actin [Isatis tinctoria] (GB:AAW63030.1); similar to actin [Malva pusilla] (GB:AAD41039.1); contains InterPro domain Actin/actin-like; (InterPro:IPR004000); contains Inte Range:  from: 3052098    to: 3054615    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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