Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                        <------ZmHOX2a(2)                      --------->CCA1(2)        --------->ARR14(2)                                                                          <        <---------GLK1(2)             --------->ANAC46 <------NtERF2                                -     --------->HSFC1(1)     --------->ANAC58         --------->LBD16                        ---------     --------->HSFB2a(2)    --------->ANAC46         <---------LBD16                    --------->HSFB2a(2)     <---------HSFB2a(2)    --------->ANAC58        <---------LBD16              --------->GLK1(2)  -    <---------LBD16  --------->AGP1   --------->ANAC58--------->LBD16           <---------GLK1(2)   <  --------->GLK1(2)  <---------ARR11(3)         <----------DOF2                 --------->ARR14(2)  - -------->HSFB2a(1)  --------->ARR11(3)        <---------ICU4                   <---------ARR14(2)  < ---------HSFB2a(1)  --------->ARR14(2)     --------->YAB1                    ----------->ARR10    <- -------->HSFC1(2)   <---------ARR14(2)    <---------ATHB12                 <---------At4g35610------ ---------HSFC1(2)  --------->GLK1(1) --------->ANAC58------>NtERF2  --------->ZAT14    <---------HSFB2a(2)   gaagtttctggaatcgctaatgagatccacaagcatcgctacgaaatcatctttcccggcgagaaactctctgttctcatcagattctctcgcgaaccgg  3044000                               --------->GLK1(2)                              <---------GLK1(2)                                  --------->LBD16                              <---------ARR14(2)                            <---------GLK1(2) <---------HSFC1(2)         --------->LBD16                            --------->MYB52(1)   --------- --------->HSFB2a(1)       --------->ANAC55(2)                         <---------ARR14(2)   <-------- --------->HSFC1(2)        <---------HSFB2a(2)                   <---------DEAR3(1)--------->ARR14(2) <---------HSFB2a(1)       <---------ANAC55(2)                 <-----------HVH21<---------ANAC46 ---------ARR14(2)        <---------LBD16                     ======================================= -------->ARR14(2)        ------>ZmHOX2a(2)                   <---------TGA1a   <---------HSFB2a(2) >MYB52(1)     <---------YAB1 --------->ARR14(2)              <---------O2  <---------ARR14(2) -------->GLK1(2)        <------ZmHOX2a(2)             <---------ANAC58--------->ARR14(2)   --------- -----------ARR10       <---------ARR14(2)             <---------ANAC58--------->GLK1(2)   <---------GLK1(2) -------->ARR11(3)      --------->ARR14(2)      <---------MYB52(1) <------NtERF2--------->HSFB2a(2) ---------ARR11(3)   <---------HSFB2a(2)       --------->TOE2(3)<------NtERF2  <---------LBD16      - --------GLK1(2)    <-----------------AGL1   <------NtERF2    --------->O2  --------->ARR14(2)     -- --->LBD16   --------->YAB1--------->HSFB2a(2)----------->GT1 --------->TGA1a--------->GLK1(2)  <XXXX   agaatcttcgaacgagcatcattctcgatccggaatctctcaatcgcagcgttaatttcgtctcgcgtcggagtatcggattccggagactcagaatcgg  3044100                                                         --------->ANAC58                                                     <------MYB46(1)                                                    --------->MYB52(2)                                                    <---------------AtSPL8                                                    --------------->AtSPL3      <---------MYB46(3)                            <---------------AtSPL3    <-------GAMYB                                   --------->MYB46(2)   <---------DEAR3(2)                               --------->MYB111(1)                     ---------   <---------MYB46(3)                             <---------MYB52(1)                       --------->LBD16  <---------DEAR3(1)                            <------MYB46(1)                           <---------ANAC46 >ARR14(2)                                      <------MYB83                              <------NtERF2 -ARR14(2)                                     --------->MYB46(2)                        <---------LBD16 ============MYC_MYB                 --------->At5g28300<-------TEIL                  <-----------HVH21 >GLK1(2)     --------->ATERF1(1)   ----------->GT1 --------->MYB59          <---------ARR14(2) ----------->AtMYB77               <---------DEAR3(1)<------MYB83            --------->GLK1(2)   ---- --------->HVH21            --------->WOX13(1) --------->MYB59               --------->ARR14(2)  ---- XXXXXXXXXXXXXXXXMIR780.1 <---------YAB1   <---------ZAT6--------->ANAC58   <---------GLK1(2)    ----   ctcgacggttgatggagtcggaccagtgatcaatgagacggtgaagagttaggttaggtacgaattctttgttctgaagaatctgcatcgtcgcgggaca  3044200                                                      <---------DEAR3(2)                                                     <---------DREB2C(2)     <-----------GT1              >>>>>>>>>AtCCA1    <---------DEAR3(1)  <---------ZAT6                  >>>>>>>>>AtLHY    <---------LBD16 -->HVH21 <---------YAB1  <---------MYB46(3)<---------TOE1(2)         --------->LBD16 ----->ANAC55(2)    --------->MYB52(1)      <---------TOE2(2)       <---------LBD16     <---------ANAC55(2) ----->ANAC58     --------->DEAR3(2)      <---------SPL7           --------->MYB52(1)   ----------->GT1 ----->ANAC58     --------->MYB46(3)   <-----------HVH21--------->ALFIN1   --------->GLK1(1)   agtattgttaccatcatcgagccaacgttggatgctaactcggtcgtatgtaacgccggtggagagactcaccggagatttcatcacatcaagtgaaatt  3044300                                    <------ZmHOX2a(2)                                    =================HOX2a_HOX2a                                   <---------ARR11(3)                                   --------->ARR11(3)                            <---------ANAC46                            <---------REM1(1)                            ----------->GT1                       <---------MYB46(3)                      <---------DEAR3(1)                      <---------AtMYB61                      --------->ALFIN1                               <---------DEAR3(1)                   <---------DEAR3(1)                       <----------DOF2                ----------->HVH21--------->ICU4        <-----------GT1     <---------ARR14(2) -------             --------->MYB52(1)---------->DOF2------>ZmHOX2a(1)  <<<<<<<<<TBF1      ---------->DOF2   ggacatttgaagaaacaagggacggtggtgatgtaaagatcatcgctcctcatgtttttgctctttcttcttcggcgaaaacgtttcaaagagagaataa  3044400                                --------->TGA1a                                <---------O2                                <---------TGA1a                                          <---------ANAC46                                --------->O2                                             --------->O2                                ==============MYC_MYB                                    --------->TGA2(1)                           ----------->HVH21                                             <---------TGA1a                         --------->O2  <---------MYB52(1)                                <---------O2                         <---------ANAC55(2)                                             ============                         =====================MYC_MYB                                    --------->TGA1a                         <---------TGA1a  <------MYB46(1)                                <---------TGA2(1)                         <---------O2 <-------GAMYB                                      ============                         <---------bZIP60(2)                                             ============                         --------->ANAC55(2)                                             <---------bZIP60(1)                         <---------bZIP60(1)                                             --------->bZIP60(1)                         --------->bZIP60(1)                                           <---------TGA2(2)                         --------->TGA1a  <------MYB83                                 >>>>>>>>>>>AtbZIP1                         <---------ANAC58--------->MYB59                              ----------->TGA1                         <---------ANAC58<---------AtMYB61                          <---------At4g35610                  =================bZIP_DOF                                         --------->At4g35610                  ========================bZIP_DOF               <---------YAB1 --------->ARR14(2) -->AHL20(2)  *TSS---------->DOF2    <---------MYB46(3)   <---------YAB1        <---------ARR14(2) <-   ataacaaaatcactgagagagaaagagacgtgactcgtgtggttaggttttaagaagatgatgagtcatgagagagagttcaaatatgctgacgtcaaaa  3044500                                                          <---------AHL20(1)                                                          --------->AHL20(2)                                                 <-----------GT1                                              <---------ICU4                                             --------->AHL20(2)                               <------                                             <---------AHL20(2)                    --------->AHL20(2)                                             <---------YAB1                   --------->AHL20(2)                                            --------->AHL20(1)                <---------AHL20(2)            -------->P                      --------->AHL20(2)               <---------AHL20(2)          --------->MYB46(3)     <---------AHL20(2)  <---------MYB52(1)      --------->AHL20(2)  <----------DOF2                --------->AHL20(2) --------->TOE2(3)------->TEIL  <---------AHL20(2)  <---------DAG2             <---------------AGL15 --------->ANAC55(2) --------->YAB1         <------ ============bZIP_DOF   <----------DOF2     <---------AHL20(1)    <---------YAB1  --------->AHL20(2) ============bZIP_DOF   <---------DAG2   --------->AHL20(2)    <---------AHL20(2) <---------AHL20(2) ====================MYC_MYB --------------->AGL15 <---------ANAC55(2) --------->TOE2(3) <---------YAB1 ----------GT1       <-----------GT1   --------->AHL20(2) <---------AHL20(2) <---------AHL20(1)     -   ttcactttttgaacaacctcttgatacttttccatttaaaaaaaaatataattacgttattttattttatgaatcttaatttttttaaattatgctaagg  3044600                                                --------->ZAT6                                              <-----------GT1                                          --------->AHL20(2)<---------AHL20(2)     <---------AHL20(2)     --------->AHL20(2)                  <---------YAB1    --------->AHL20(2)<---------ANAC58    <---------AHL20(2)                --------->ICU4       <---------AHL20(2)<---------AtLEC2 ---TOE1(3)                           <---------YAB1       <---------AHL20(1)<---------ANAC58 ---TOE2(3)                        <---------TOE2(3)----------->GT1 --------------->AGL15    <------- -------->AHL20(2)           <---------AHL20(2)<---------At5g28300 ----------------->AG<-----------GT1   ttttaaataatatggagagacagttttttgttaaattgagattattatttacagtagttaataaaatttccctaattttgcatgtttattttcaactttg  3044700                                                                              <---------ANAC58                                                                        --------->LBD16                                                                       --------->ANAC55(2)                                                                       <---------ANAC58                                        <---------AHL20(2)             <---------ANAC55(1)                                       --------->AHL20(2)              <---------ANAC55(2)                                      <---------YAB1                   <---------ANAC46                                    <---------AHL20(2)                 <---------ANAC58        <<<<<<                                   <---------AHL20(2)                 <---------LBD16          <<<<<<                                <---------AHL20(2)                <----------DOF2        <----------DOF2                  <----------DOF2  --------->AHL20(2)             <---------DAG2         <---------DAG2 ---DOF2          <---------DAG2--------->AHL20(2)         --------->ICU4     <---------ANAC58 <<<<<<   tataacattgggagaaaaaacttttttgacatatttatttattatatgccaaacccatgaaatgaatacttttccgtatttcgttctctcacttttggtc  3044800                                                                                  ------->GAMYB                             --------->REM1(2)                                  ------>MYB46(1)                          <---------ANAC46                                      ------>MYB83                          <------NtERF2                                        --------->MYB52(1)                         ------>NtERF2                                        --------->AtMYB61                         <---------ZAT18                                      --------->DEAR3(1)                        --------->DEAR3(1)                                    --------->MYB46(3)                      <---------RAP2.3(1)                                    --------->MYB46(3)                     <---------RAP2.3(3)                                 --------->SPL7                     <---------DEAR3(1)                              --------------->AtSPL3                  <----------DOF2                                    --------->ZAT6               <---------ARR11(3)                                    --------------->AtSPL8               --------->ARR14(2)                                  <---------DOF5.7(2)    --------->GLK1(1)               --------->ARR11(3)                    <-------TEIL<---------MYB52(1)      <---------GLK1(2) <<<<WRKY26    <---------ARR14(2)      --------->ARR11(3)        --------->DOF5.7(2) <-------TEIL <<<<WRKY43   <---------CCA1(2)      ----------->ARR10  <---------At4g35610  <---------MYB52(2) <<<<WRKY38   <---------GLK1(1)      <---------TOE2(3)  --------->At4g35610 --------->ANAC46       <-   aaatagttgagtctgggtatctttcggcgcgcgtagactaagatttgtattcgagttcatctcaaccgttaacagtaccaccaacggtacagatttcgcc  3044900  Previous    Next  AGI:  At5g09800.1    Description:  U-box domain-containing protein. similar to U-box domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G64660.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO46456.1); contains InterPro domain Armadillo-type fold; (InterPro:IPR016024); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989); contains InterPro domain U box; (InterPro:IPR003613) Range:  from: 3043013    to: 3044414    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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