Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                             --------->LBD16                           ----------->HVH21                         <---------LBD16                         <---------At4g35610               ---------->DOF2                 <---------                       <-----------GT1                --------->AHL20(2)            --------->AHL20(2)                  <---------ICU4                  <---------YAB1               <------ZmHOX2a(1) <---------At4g35610 <-----------HVH21            <---------AHL20(2)         --------->MYB59 ---ARR11(3)--------->TOE1(3)                  --------->AHL20(2)    --------->ANAC58  ---------->DOF2 -->ARR11(3)--------->TOE2(3)                  <---------AHL20(2)    --------->ANAC58<---------AHL20(2)   ttcttctgagataaccctaaacatttcaccggacaagagaaaaatccatttttttattaaacaaagaacacaagaaaattaggaaatttaaaagcgaaga  3040600                                    --------->MYB46(3)                                    <---------HSFB2a(1)                                    --------->KAN4(1)                                   <---------KAN4(2)                               --------->ETT(1)                            <---------MYB46(3)                            <------MYB46(1)                            <------MYB83                           <---------AtMYB61                          <---------MYB52(1)                         <-------GAMYB                               --------->ANAC58              --                        --------->MYB55(2)              <<<<<<<<<<<<<<<<<LFY           <---------TOE2(3) -ID1                   <---------MYB46(3)    ---------->DOF2        --------->ANAC58  --------->ANAC46   aacaaaaaatccatacttcttacaggtcgttggtcggaacaatcgacacaaagccaagttccaatggggacacgaacaacaatgggtctaaggcatttca  3040700                                                                           <---------ANAC58                                                                           --------->ANAC55(2)                                                                           <---------ANAC55(2)                                                                           <---------bZIP60(2)                                                                           --------->O2                                                                           --------->bZIP60(1)                                                                           <---------ANAC58                                                                           <---------O2                                                                           <---------TGA1a                                                                           <---------bZIP60(1)                                                                      --------->At4g35610                                                                      <---------At4g35610                                                                     <---------TOE1(2)                                                                     <---------TOE2(2)                                                                    <-----------RAV1(2)                                                         <---------ALFIN1 ----------->STF1                                                      <---------ARR14(2)----------->HVH21                                                      --------->ARR14(2)----------->TGA1                                                   --------->HSFB2a(2)--------->ZAT2                                                   <---------HSFB2a(2)<---------ZAT2           ------ ---------->DOF2                                  <---------LBD16--------->HSFB2a(2) --------->At4g35610 --------->HVH21   <-----------HVH21          ------>ZmHOX2a(1)  <---------HSFB2a(2) <---------At4g35610   tgtgaaagcctctatcgcatttgtcacagagaagaagctcatcgtctccttctccagaaccacatttctcgcaggtgacgttactgtagctgtcttcgtc  3040800                                                                               <-------TEIL                                                                              --------->GLK1(2)                                                                              --------->CCA1(2)                                                                             <---------GLK1(2)                                                                             --------->ARR14(2)                                                                             --------->ARR11(1)                                                                             <---------ARR14(2)                                                                            <---------GLK1(1)                                                                           ----------->ARR10                                                                        --------->ALFIN1                                                                        <---------ANAC46                                                                      <---------MYB46(3)                                                                      --------->MYB55(2)     <------NtERF2                              --------->GLK1(1)                      <---------DEAR3(1)      --------                             <---------GLK1(2)                       <---------AtMYB61     <---------ANAC58                  ----------->RAV1(1)                             <---------DEAR3(1)       <---------DEAR3(1)    <<<<<<<<<TBF1 ------->GAMYB              --------->ANAC46    ------>ZmHOX2a(1)         <---------ANAC58 <<<<<<<<<TBF1    --------->AtMYB61     <---------ARR11(3) <---------At4g35610--------->ARR14(1) ---->ID1        --------->MYB46(3)   --------->ICU4--------->ATHB12 --------->ALFIN1<------ZmHOX2a(1)   ttcttcttcttcttgttcaaccacagggacagatttcgccattatctcagccattgatttcatcttcctcggtggtggagattcggaggaagggcgtctc  3040900                                                 --------->ARR14(2)                                                <------ZmHOX2a(1)                                        <-----------RAV1(2)                                        <------NtERF2                                       --------->LBD16                                       <---------SPL7                                       ------>NtERF2                                       <------NtERF2                 <------NtERF2        --------->DEAR3(1)                ------>NtERF2        --------->RAP2.3(1)               --------->DEAR3(1)    <------NtERF2               <---------DEAR3(1)    --------->ATERF1(1)              ---------->ID1        <---------RAP2.3(1)             <-----------HVH21      <---------ATERF1(1)               <---------ANAC55(2)          --           --------->SPL7           ------>NtERF2<---------ARR14(2)----------->HVH21            <----          <---------MYB52(1)       --------->ANAC46         <-------MYC3                     --------        <---------ANAC58           --------->ANAC58 <---------ANAC58 --------->RAP2.6(3)     <------NtERF2        <---------ANAC58           --------->ANAC58<-------TEIL    ----------->TGA1          <-------     <----------DOF2               <---------DEAR3(1)       ------->MYC3                   <---------DEAR3(1)    <---------HSFB2a(1)            --------->DEAR3(1)      <---------O2    --------->At4g35610 ------   <---------At4g35610            --------->ATERF1(1)      --------->O2    <---------At4g35610------- ->ATERF1(1)--------->MYB52(2)   <---------ATERF1(1)<---------ANAC58--------->MYB52(1)----------->ARR10   gctggagctttcgttcgtcgcctcgatgagcaaggagacgccgcaggggaggatgcgttccatgtggccatgacggaagctcacgacgaagagtcgccgg  3041000                                                       --------->ANAC58                                                  <---------ZAT18                                               --------->ALFIN1                                              <-------MYC3                                              ------->MYC3                                             *TSS --------->ZAT18                                             --------->O2                                             <---------TGA1a                                             <---------O2                                             --------->TGA1a                                             <---------ANAC58                                             <---------ANAC58                                             <---------ANAC46                                            --------->LBD16                         <------MYB46(1)    ------>NtERF2                         <------MYB83       <------NtERF2                        --------->ALFIN1 ------>NtERF2 --------->ANAC58                       ================================MYC_MYB                      <---------ANAC58   --------->ABI4(1)                      <---------ANAC58  --------->DEAR3(1)                     <---------MYB46(3) <---------ALFIN1                     <------MYB83      --------->DEAR4(2)                        <---------ANAC46                     <------MYB46(1)   --------->DEAR3(2)                        <---------ANAC58                     --------->ATHB12  --------->ORA47(2)                        <---------ANAC58      --------->CCA1(2)<--------P      --------->MYB46(3)                    <---------LBD16    <---- ------->MYB52(1)    --------->MYB55(2)--------->ATERF1(1)                  --------->At4g35610 ----- --NtERF2          <---------WOX13(1) <---------ATERF1(1)                   ----------->RAV1(2) <---- ->ATERF1(1)     --------->ATHB12   <---------ZAT14    --------->ANAC46   <---------ALFIN1      ----- --LBD16        <---------YAB1      --------->ZAT14 <---------ZAT18     <-----------HVH21     <------ --->LBD16<---------YAB1<---------MYB46(3) --------->DEAR3(1)       <---------ZAT18----------->GT1 -->DEAR3(1)--------->ARR11(3)      --------->ZAT18 --------->ZAT18 --------->ZAT18<---------ZAT6   agaacgggatatatgattttgattggttggggctaatgtgcaccgccgcgtgtgcgcacgaaaactgatgtgcgcatcacctggagtgtaatttgggatt  3041100  <----------DOF2 -----HSFC1(2)                              ----------->HVH21 ---->HSFB2a(1)                       <-----------GT1 -----HSFB2a(1)           <----------DOF2 <----------DOF2       <---------MYB52(1)   <---------ICU4 ---->HSFC1(2)          <----------DOF2 >>>>>>>>>>>>WRKY18   <---------ANAC46----------->GT1 ---GLK1(2)    <----------DOF2 ---------->ID1           <---------ICU4    ---------->DOF2   cttcctttgagactcttctttatcggctcttttgtttttttgacctttgacaaattcaaaattactggtatgtcttaaaaggtttaaacattgtaagtga  3041200              --------->MYB46(3)         <-----------GT1        <---------ICU4                         <-----------GT1       --------    <---------AHL20(2)      <---------AHL20(2)                        --------->AHL20(2)     <-------    --------->AHL20(2)      <---------YAB1                        --------->AHL20(2)        ---------    --------->AHL20(1)      --------->AHL20(2)                    <---------AHL20(2)     --------->ICU4    <---------AHL20(1)     --------->AHL20(2)               --------->ANAC55(2)  ----------->GT1   --------->AHL20(2)    <----------DOF2     --------->TOE2(3)   --------->AHL20(2)     <---------AHL20(2) --------->YAB1    ---------->DOF2 <-----------GT1        <-----------GT1       <---------WOX13(1) --   tactaataaatttacaaccattaaagccttttaattgttactaaatttcttaactaaattttacttatttaatttactagggattgatataaaaattaat  3041300                                                  ----------->GT1        --------->At4g35610                                           <----------DOF2               <---------PCF2                                       <---------GLK1(1)               <---------ZAT18                                       --------->RVE1(1)               <---------DEAR3(1)                     --------->ANAC46  <---------CCA1(1)            <------MYB83                     --------->ANAC58  <---------RVE1(1)            <------MYB46(1)         --------->ZAT14               --------->GLK1(1)            <---------MYB46(3)     <-----------GT1 --------->ANAC58  --------->CCA1(1)           <---------AtMYB61 ->AHL20(2)          ----------->GT1  <---------ARR11(3)        <-----------RAV1(1)            ------ --AHL20(2)          --------->ANAC55(1)--------->ARR11(3)  --------->AHL20(2)                ------- >AHL20(2)           --------->YAB1   --------->ARR11(3)--------->AHL20(2)                  <-------- --------->GT1       --------->ANAC55(2)<---------ARR11(3)--------->AHL20(2)             --------->At5g28300   acagtattaactatactatacaaacgtaattacaaaaatagatatctttcaattgaaaaaaaatatatgttggtgggctcaatacaaacacagtaaacgt  3041400                        ------->GAMYB                       --------->ANAC58                       --------->ANAC58                     <---------ALFIN1                 --------->ANAC46                 --------->ANAC58          --------->SPL7                 --------->ANAC58        <---------SPL7                ------>NtERF2           <------MYB46(1)               --------->DEAR3(1)   ------->GAMYB--------->ATHB12        <---------At4g35610        --------->MYB46(3)                         --------->ANAC58        --------->At4g35610 --------->ANAC58 <------NtERF2                    --------->ANAC58        ----------->RAV1(2) --------->ANAC58 ------>NtERF2           <---------AHL20(2)      <---------WRKY12 --------->ANAC46 <------MYB83               <----------DOF2 --->TOE2(3)   <---------ALFIN1  ----------->RAV1(1)              <-----------------AGL3    <-------- -->ANAC46XXXXXXXXXXXXXXXXXXXX>MIR171A  <---------DEAR3(2)      --------->ARR11(3)          --------- -DOF5.7(2)   --------->MYB46(3) --------->MYB52(1)             <---------ARR11(3)     ---------->DOF2   caatttcgtcaactgagccaccccaacgccaagcccaacagtcggtccgcctcattggaggctcaagttctttatttgacaagctaaaccaaagtgttct  3041500  Previous    Next  AGI:  At5g09790.1    Description:  ATXR5 (SETDOMAIN GROUP 15); DNA binding. Identical to Histone-lysine N-methyltransferase ATXR5 (ATXR5) [Arabidopsis Thaliana] (GB:Q8VZJ1;GB:Q9FXW6;GB:Q9LXE2); similar to ATXR6 (Arabidopsis thaliana Trithorax- related protein 6), DNA binding [Arabidopsis thaliana] (TAIR:AT5G24330.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO46447.1); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Zinc finger, PHD-type; (InterPro:IPR001965); contains InterPro domain Zinc finger, FYVE/PHD-type; (InterPro:IPR011011); contains InterPro domain SET; (InterPro:IPR001214) Range:  from: 3038979    to: 3041045    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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